RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 CAVIN1Q6NZI2 390 aaKnown RBP14.56□□□□□ -0.08
SMPD4-209ENST00000439886 SSFA2P28290 1259 aa14.56□□□□□ -0.08
SMPD4-209ENST00000439886 GPATCH8Q9UKJ3 1502 aaKnown RBP14.56□□□□□ -0.08
SMPD4-209ENST00000439886 IQGAP2Q13576 1575 aa14.56□□□□□ -0.08
SMPD4-209ENST00000439886 FOXD4L6Q3SYB3 417 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-209ENST00000439886 FOXD4L3Q6VB84 417 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-209ENST00000439886 SAFB2Q14151 953 aaKnown RBP eCLIP14.55□□□□□ -0.08
SMPD4-209ENST00000439886 CFAP53Q96M91 514 aa14.55□□□□□ -0.08
SMPD4-209ENST00000439886 PLB1Q6P1J6 1458 aa14.55□□□□□ -0.08
SMPD4-209ENST00000439886 WDR62O43379 1518 aa14.55□□□□□ -0.08
SMPD4-209ENST00000439886 MVPQ14764 893 aaKnown RBP14.54□□□□□ -0.08
SMPD4-209ENST00000439886 C1orf115Q9H7X2 142 aa14.54□□□□□ -0.08
SMPD4-209ENST00000439886 NUP153P49790 1475 aaKnown RBP14.54□□□□□ -0.08
SMPD4-209ENST00000439886 RNF214Q8ND24 703 aa14.54□□□□□ -0.08
SMPD4-209ENST00000439886 RUNDC1Q96C34 613 aa14.53□□□□□ -0.08
SMPD4-209ENST00000439886 ELL2O00472 640 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-209ENST00000439886 EXOSC9Q06265 439 aaKnown RBP14.53□□□□□ -0.08
SMPD4-209ENST00000439886 COL17A1Q9UMD9 1497 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-209ENST00000439886 MTHFSP49914 203 aa14.53□□□□□ -0.08
SMPD4-209ENST00000439886 SKOR2Q2VWA4 1001 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-209ENST00000439886 CFAP70Q5T0N1 1121 aa14.53□□□□□ -0.08
SMPD4-209ENST00000439886 ZSCAN30Q86W11 494 aa14.52□□□□□ -0.08
SMPD4-209ENST00000439886 PLCB2Q00722 1185 aa14.52□□□□□ -0.09
SMPD4-209ENST00000439886 TRMT2AQ8IZ69 625 aaKnown RBP14.52□□□□□ -0.09
SMPD4-209ENST00000439886 CCDC173Q0VFZ6 552 aa14.51□□□□□ -0.09
SMPD4-209ENST00000439886 TRAK1Q9UPV9 953 aa14.51□□□□□ -0.09
SMPD4-209ENST00000439886 MAGI2Q86UL8 1455 aa14.51□□□□□ -0.09
SMPD4-209ENST00000439886 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-209ENST00000439886 JPH4Q96JJ6 628 aa14.51□□□□□ -0.09
SMPD4-209ENST00000439886 ZNF608Q9ULD9 1512 aaPredicted RBP14.5□□□□□ -0.09
SMPD4-209ENST00000439886 UQCRHLA0A096LP55 91 aa14.5□□□□□ -0.09
SMPD4-209ENST00000439886 UQCRHP07919 91 aa14.5□□□□□ -0.09
SMPD4-209ENST00000439886 NOL8Q76FK4 1167 aaKnown RBP14.5□□□□□ -0.09
SMPD4-209ENST00000439886 SECISBP2LQ93073 1101 aaKnown RBP14.5□□□□□ -0.09
SMPD4-209ENST00000439886 ZNF830Q96NB3 372 aaPredicted RBP14.5□□□□□ -0.09
SMPD4-209ENST00000439886 SLC12A5Q9H2X9 1139 aa14.5□□□□□ -0.09
SMPD4-209ENST00000439886 NOB1Q9ULX3 412 aaKnown RBP14.5□□□□□ -0.09
SMPD4-209ENST00000439886 ARHGEF12Q9NZN5 1544 aa14.48□□□□□ -0.09
SMPD4-209ENST00000439886 TMEM57Q8N5G2 664 aa14.48□□□□□ -0.09
SMPD4-209ENST00000439886 CARD14Q9BXL6 1004 aa14.48□□□□□ -0.09
SMPD4-209ENST00000439886 TULP1O00294 542 aaPredicted RBP14.48□□□□□ -0.09
SMPD4-209ENST00000439886 PRPF40AO75400 957 aaKnown RBP14.48□□□□□ -0.09
SMPD4-209ENST00000439886 DDX19BQ9UMR2 479 aa14.47□□□□□ -0.09
SMPD4-209ENST00000439886 NUTM2DQ5VT03 806 aaPredicted RBP14.47□□□□□ -0.09
SMPD4-209ENST00000439886 RBM27Q9P2N5 1060 aaKnown RBP14.47□□□□□ -0.09
SMPD4-209ENST00000439886 TRIM27P14373 513 aa14.47□□□□□ -0.09
SMPD4-209ENST00000439886 IFT140Q96RY7 1462 aa14.46□□□□□ -0.09
SMPD4-209ENST00000439886 CD2BP2O95400 341 aaKnown RBP14.46□□□□□ -0.09
SMPD4-209ENST00000439886 SSH1Q8WYL5 1049 aa14.46□□□□□ -0.09
SMPD4-209ENST00000439886 A2MP01023 1474 aa14.46□□□□□ -0.09
SMPD4-209ENST00000439886 GAS2L2Q8NHY3 880 aa14.46□□□□□ -0.1
SMPD4-209ENST00000439886 K7ELQ4 463 aaPredicted RBP14.45□□□□□ -0.1
SMPD4-209ENST00000439886 CHAMP1Q96JM3 812 aa14.45□□□□□ -0.1
SMPD4-209ENST00000439886 ISY1Q9ULR0 285 aaKnown RBP14.44□□□□□ -0.1
SMPD4-209ENST00000439886 TARBP1Q13395 1621 aaKnown RBP14.43□□□□□ -0.1
SMPD4-209ENST00000439886 BAG4O95429 457 aaKnown RBP14.43□□□□□ -0.1
SMPD4-209ENST00000439886 OFD1O75665 1012 aa14.43□□□□□ -0.1
SMPD4-209ENST00000439886 RAB3GAP1Q15042 981 aa14.43□□□□□ -0.1
SMPD4-209ENST00000439886 SAMD1Q6SPF0 538 aaPredicted RBP14.43□□□□□ -0.1
SMPD4-209ENST00000439886 ATF7IPQ6VMQ6 1270 aa14.43□□□□□ -0.1
SMPD4-209ENST00000439886 PPP4R3BQ5MIZ7 849 aa14.42□□□□□ -0.1
SMPD4-209ENST00000439886 CHD1LQ86WJ1 897 aa14.42□□□□□ -0.1
SMPD4-209ENST00000439886 NINLQ9Y2I6 1382 aa14.42□□□□□ -0.1
SMPD4-209ENST00000439886 PTMSP20962 102 aa14.42□□□□□ -0.1
SMPD4-209ENST00000439886 TMEM132EQ6IEE7 984 aa14.42□□□□□ -0.1
SMPD4-209ENST00000439886 PLPPR3Q6T4P5 718 aa14.42□□□□□ -0.1
SMPD4-209ENST00000439886 SMAP1Q8IYB5 467 aaPredicted RBP14.42□□□□□ -0.1
SMPD4-209ENST00000439886 FAM177BA6PVY3 158 aa14.41□□□□□ -0.1
SMPD4-209ENST00000439886 IPO8O15397 1037 aaKnown RBP14.41□□□□□ -0.1
SMPD4-209ENST00000439886 TSC1Q92574 1164 aa14.41□□□□□ -0.1
SMPD4-209ENST00000439886 FAM135AQ9P2D6 1515 aa14.41□□□□□ -0.1
SMPD4-209ENST00000439886 SYCE3A1L190 88 aa14.4□□□□□ -0.1
SMPD4-209ENST00000439886 WDR63Q8IWG1 891 aa14.4□□□□□ -0.1
SMPD4-209ENST00000439886 NGEFQ8N5V2 710 aa14.4□□□□□ -0.1
SMPD4-209ENST00000439886 ASXL1Q8IXJ9 1541 aa14.4□□□□□ -0.1
SMPD4-209ENST00000439886 INSRP06213 1382 aa14.4□□□□□ -0.1
SMPD4-209ENST00000439886 PRIM1P49642 420 aaKnown RBP14.4□□□□□ -0.1
SMPD4-209ENST00000439886 CIZ1Q9ULV3 898 aaPredicted RBP14.4□□□□□ -0.1
SMPD4-209ENST00000439886 NLRP1Q9C000 1473 aa14.4□□□□□ -0.1
SMPD4-209ENST00000439886 RIPK4P57078 832 aa14.4□□□□□ -0.1
SMPD4-209ENST00000439886 RBSNQ9H1K0 784 aa14.4□□□□□ -0.1
SMPD4-209ENST00000439886 TMEM51Q9NW97 253 aa14.4□□□□□ -0.1
SMPD4-209ENST00000439886 SMC5Q8IY18 1101 aa14.39□□□□□ -0.11
SMPD4-209ENST00000439886 ZNF692Q9BU19 519 aaPredicted RBP14.39□□□□□ -0.11
SMPD4-209ENST00000439886 WDR7Q9Y4E6 1490 aa14.39□□□□□ -0.11
SMPD4-209ENST00000439886 TBC1D9Q6ZT07 1266 aa14.39□□□□□ -0.11
SMPD4-209ENST00000439886 ZSCAN23Q3MJ62 389 aa14.39□□□□□ -0.11
SMPD4-209ENST00000439886 ADGRL2O95490 1459 aa14.38□□□□□ -0.11
SMPD4-209ENST00000439886 CARMIL2Q6F5E8 1435 aa14.38□□□□□ -0.11
SMPD4-209ENST00000439886 PKP1Q13835 747 aa14.38□□□□□ -0.11
SMPD4-209ENST00000439886 GPRASP1Q5JY77 1395 aa14.38□□□□□ -0.11
SMPD4-209ENST00000439886 RAPGEF6Q8TEU7 1601 aa14.38□□□□□ -0.11
SMPD4-209ENST00000439886 TEX2Q8IWB9 1127 aa14.38□□□□□ -0.11
SMPD4-209ENST00000439886 PIK3C2GO75747 1445 aa14.38□□□□□ -0.11
SMPD4-209ENST00000439886 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
SMPD4-209ENST00000439886 JARID2Q92833 1246 aaPredicted RBP14.37□□□□□ -0.11
SMPD4-209ENST00000439886 STK26Q9P289 416 aa14.37□□□□□ -0.11
SMPD4-209ENST00000439886 KDM5DQ9BY66 1539 aa14.37□□□□□ -0.11
SMPD4-209ENST00000439886 CBX1P83916 185 aa14.37□□□□□ -0.11
SMPD4-209ENST00000439886 KLHL40Q2TBA0 621 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms