RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 UPF1Q92900 1129 aaKnown RBP eCLIP12.35□□□□□ -0.43
RPE-211ENST00000438265 USP32Q8NFA0 1604 aa12.33□□□□□ -0.43
RPE-211ENST00000438265 SOS2Q07890 1332 aaPredicted RBP12.33□□□□□ -0.44
RPE-211ENST00000438265 PIK3C2GO75747 1445 aa12.32□□□□□ -0.44
RPE-211ENST00000438265 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
RPE-211ENST00000438265 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
RPE-211ENST00000438265 TMEM132EQ6IEE7 984 aa12.32□□□□□ -0.44
RPE-211ENST00000438265 WAPLQ7Z5K2 1190 aa12.32□□□□□ -0.44
RPE-211ENST00000438265 C8orf37Q96NL8 207 aa12.32□□□□□ -0.44
RPE-211ENST00000438265 TECPR2O15040 1411 aa12.31□□□□□ -0.44
RPE-211ENST00000438265 HRCP23327 699 aa12.31□□□□□ -0.44
RPE-211ENST00000438265 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
RPE-211ENST00000438265 ZNF772Q68DY9 489 aaPredicted RBP12.31□□□□□ -0.44
RPE-211ENST00000438265 MPHOSPH9Q99550 1183 aa12.31□□□□□ -0.44
RPE-211ENST00000438265 MYOM2P54296 1465 aa12.31□□□□□ -0.44
RPE-211ENST00000438265 CDK12Q9NYV4 1490 aaPredicted RBP12.31□□□□□ -0.44
RPE-211ENST00000438265 RPGRIP1LQ68CZ1 1315 aa12.31□□□□□ -0.44
RPE-211ENST00000438265 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
RPE-211ENST00000438265 ADAMTS2O95450 1211 aa12.3□□□□□ -0.44
RPE-211ENST00000438265 LRRC59Q96AG4 307 aaKnown RBP12.3□□□□□ -0.44
RPE-211ENST00000438265 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.3□□□□□ -0.44
RPE-211ENST00000438265 CCDC144AA2RUR9 1427 aa12.29□□□□□ -0.44
RPE-211ENST00000438265 NRXN1Q9ULB1 1477 aa12.29□□□□□ -0.44
RPE-211ENST00000438265 RXRBP28702 533 aa12.29□□□□□ -0.44
RPE-211ENST00000438265 STK26Q9P289 416 aa12.29□□□□□ -0.44
RPE-211ENST00000438265 SRCAPQ6ZRS2 3230 aa12.29□□□□□ -0.44
RPE-211ENST00000438265 KIF1AQ12756 1690 aa12.28□□□□□ -0.44
RPE-211ENST00000438265 PLCH1Q4KWH8 1693 aa12.28□□□□□ -0.44
RPE-211ENST00000438265 LRPPRCP42704 1394 aaKnown RBP12.28□□□□□ -0.44
RPE-211ENST00000438265 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
RPE-211ENST00000438265 GLI3P10071 1580 aa12.27□□□□□ -0.44
RPE-211ENST00000438265 QTRT2Q9H974 415 aaKnown RBP12.27□□□□□ -0.45
RPE-211ENST00000438265 CRYBG1Q9Y4K1 1723 aa12.27□□□□□ -0.45
RPE-211ENST00000438265 YTHDC2Q9H6S0 1430 aaKnown RBP12.27□□□□□ -0.45
RPE-211ENST00000438265 RAB3GAP2Q9H2M9 1393 aa12.26□□□□□ -0.45
RPE-211ENST00000438265 ATRNO75882 1429 aa12.26□□□□□ -0.45
RPE-211ENST00000438265 BCL9LQ86UU0 1499 aa12.26□□□□□ -0.45
RPE-211ENST00000438265 FOXO3O43524 673 aa12.25□□□□□ -0.45
RPE-211ENST00000438265 ABCC11Q96J66 1382 aa12.25□□□□□ -0.45
RPE-211ENST00000438265 ADGRB1O14514 1584 aa12.25□□□□□ -0.45
RPE-211ENST00000438265 ARHGEF28Q8N1W1 1705 aaKnown RBP12.25□□□□□ -0.45
RPE-211ENST00000438265 ESCO1Q5FWF5 840 aa12.24□□□□□ -0.45
RPE-211ENST00000438265 NRAPQ86VF7 1730 aa12.24□□□□□ -0.45
RPE-211ENST00000438265 ALS2Q96Q42 1657 aa12.24□□□□□ -0.45
RPE-211ENST00000438265 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
RPE-211ENST00000438265 CFAP70Q5T0N1 1121 aa12.23□□□□□ -0.45
RPE-211ENST00000438265 NGLY1Q96IV0 654 aa12.23□□□□□ -0.45
RPE-211ENST00000438265 RBM6P78332 1123 aaKnown RBP12.22□□□□□ -0.45
RPE-211ENST00000438265 FNBP4Q8N3X1 1017 aaPredicted RBP12.22□□□□□ -0.45
RPE-211ENST00000438265 ADGRB2O60241 1585 aa12.22□□□□□ -0.45
RPE-211ENST00000438265 NWD2Q9ULI1 1742 aa12.21□□□□□ -0.45
RPE-211ENST00000438265 C14orf93Q9H972 538 aaKnown RBP12.21□□□□□ -0.45
RPE-211ENST00000438265 USP21Q9UK80 565 aa12.21□□□□□ -0.45
RPE-211ENST00000438265 NPHP3Q7Z494 1330 aa12.2□□□□□ -0.46
RPE-211ENST00000438265 TRIM26Q12899 539 aaPredicted RBP12.2□□□□□ -0.46
RPE-211ENST00000438265 SAFB2Q14151 953 aaKnown RBP eCLIP12.2□□□□□ -0.46
RPE-211ENST00000438265 SLIT2O94813 1529 aa12.2□□□□□ -0.46
RPE-211ENST00000438265 DLC1Q96QB1 1528 aa12.19□□□□□ -0.46
RPE-211ENST00000438265 SPATA31A3Q5VYP0 1347 aa12.18□□□□□ -0.46
RPE-211ENST00000438265 CABLES1Q8TDN4 633 aa12.18□□□□□ -0.46
RPE-211ENST00000438265 RALGAPBQ86X10 1494 aa12.17□□□□□ -0.46
RPE-211ENST00000438265 PRR36Q9H6K5 1346 aa12.16□□□□□ -0.46
RPE-211ENST00000438265 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
RPE-211ENST00000438265 PRAM1Q96QH2 718 aa12.16□□□□□ -0.46
RPE-211ENST00000438265 TNS3Q68CZ2 1445 aa12.16□□□□□ -0.46
RPE-211ENST00000438265 TOPAZ1Q8N9V7 1692 aa12.16□□□□□ -0.46
RPE-211ENST00000438265 ITSN1Q15811 1721 aa12.15□□□□□ -0.46
RPE-211ENST00000438265 KRT28Q7Z3Y7 464 aa12.15□□□□□ -0.46
RPE-211ENST00000438265 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.46
RPE-211ENST00000438265 DHX57Q6P158 1386 aaKnown RBP12.15□□□□□ -0.46
RPE-211ENST00000438265 PHRF1Q9P1Y6 1649 aaKnown RBP12.15□□□□□ -0.47
RPE-211ENST00000438265 HIRIP3Q9BW71 556 aaPredicted RBP12.14□□□□□ -0.47
RPE-211ENST00000438265 PHF8Q9UPP1 1060 aa12.14□□□□□ -0.47
RPE-211ENST00000438265 PMFBP1Q8TBY8 1022 aa12.13□□□□□ -0.47
RPE-211ENST00000438265 SIRT1Q96EB6 747 aa12.13□□□□□ -0.47
RPE-211ENST00000438265 TULP4Q9NRJ4 1543 aa12.12□□□□□ -0.47
RPE-211ENST00000438265 GJD4Q96KN9 370 aaPredicted RBP12.12□□□□□ -0.47
RPE-211ENST00000438265 TRAK1Q9UPV9 953 aa12.12□□□□□ -0.47
RPE-211ENST00000438265 ATAD2Q6PL18 1390 aa12.12□□□□□ -0.47
RPE-211ENST00000438265 COL14A1Q05707 1796 aaKnown RBP12.11□□□□□ -0.47
RPE-211ENST00000438265 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
RPE-211ENST00000438265 TNS1Q9HBL0 1735 aaKnown RBP12.11□□□□□ -0.47
RPE-211ENST00000438265 KIAA1210Q9ULL0 1709 aa12.11□□□□□ -0.47
RPE-211ENST00000438265 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
RPE-211ENST00000438265 ATP7BP35670 1465 aa12.1□□□□□ -0.47
RPE-211ENST00000438265 SBNO1A3KN83 1393 aa12.1□□□□□ -0.47
RPE-211ENST00000438265 UNC5CLQ8IV45 518 aa12.1□□□□□ -0.47
RPE-211ENST00000438265 ANKARQ7Z5J8 1434 aa12.1□□□□□ -0.47
RPE-211ENST00000438265 THSD7AQ9UPZ6 1657 aa12.09□□□□□ -0.47
RPE-211ENST00000438265 FAM83GA6ND36 823 aa12.08□□□□□ -0.48
RPE-211ENST00000438265 DCAF11Q8TEB1 546 aa12.08□□□□□ -0.48
RPE-211ENST00000438265 QRICH2Q9H0J4 1663 aa12.07□□□□□ -0.48
RPE-211ENST00000438265 RGPD5Q99666 1765 aa12.07□□□□□ -0.48
RPE-211ENST00000438265 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
RPE-211ENST00000438265 DEFB132Q7Z7B7 95 aa12.06□□□□□ -0.48
RPE-211ENST00000438265 POGKQ9P215 609 aa12.06□□□□□ -0.48
RPE-211ENST00000438265 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
RPE-211ENST00000438265 NRKQ7Z2Y5 1582 aa12.05□□□□□ -0.48
RPE-211ENST00000438265 LMO7Q8WWI1 1683 aa12.04□□□□□ -0.48
RPE-211ENST00000438265 RGPD1P0DJD0 1748 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms