RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 RGL3Q3MIN7 710 aa23.45■■□□□ 1.34
CALD1-208ENST00000435928 TECPR2O15040 1411 aa23.44■■□□□ 1.34
CALD1-208ENST00000435928 UPF1Q92900 1129 aaKnown RBP eCLIP23.44■■□□□ 1.34
CALD1-208ENST00000435928 MPHOSPH9Q99550 1183 aa23.44■■□□□ 1.34
CALD1-208ENST00000435928 ADAMTS2O95450 1211 aa23.43■■□□□ 1.34
CALD1-208ENST00000435928 RGS12O14924 1447 aa23.42■■□□□ 1.34
CALD1-208ENST00000435928 PIK3C2GO75747 1445 aa23.42■■□□□ 1.34
CALD1-208ENST00000435928 LRPPRCP42704 1394 aaKnown RBP23.4■■□□□ 1.34
CALD1-208ENST00000435928 NGLY1Q96IV0 654 aa23.4■■□□□ 1.34
CALD1-208ENST00000435928 QTRT2Q9H974 415 aaKnown RBP23.4■■□□□ 1.34
CALD1-208ENST00000435928 STK26Q9P289 416 aa23.4■■□□□ 1.34
CALD1-208ENST00000435928 MARF1Q9Y4F3 1742 aaKnown RBP23.39■■□□□ 1.34
CALD1-208ENST00000435928 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
CALD1-208ENST00000435928 PXDNQ92626 1479 aa23.39■■□□□ 1.34
CALD1-208ENST00000435928 RBM6P78332 1123 aaKnown RBP23.39■■□□□ 1.33
CALD1-208ENST00000435928 ESCO1Q5FWF5 840 aa23.39■■□□□ 1.33
CALD1-208ENST00000435928 FMN2Q9NZ56 1722 aa23.39■■□□□ 1.33
CALD1-208ENST00000435928 KIF1AQ12756 1690 aa23.36■■□□□ 1.33
CALD1-208ENST00000435928 WAPLQ7Z5K2 1190 aa23.36■■□□□ 1.33
CALD1-208ENST00000435928 ABCC11Q96J66 1382 aa23.36■■□□□ 1.33
CALD1-208ENST00000435928 MYOM2P54296 1465 aa23.36■■□□□ 1.33
CALD1-208ENST00000435928 ACIN1Q9UKV3 1341 aaKnown RBP23.34■■□□□ 1.33
CALD1-208ENST00000435928 YTHDC2Q9H6S0 1430 aaKnown RBP23.34■■□□□ 1.33
CALD1-208ENST00000435928 TMEM132EQ6IEE7 984 aa23.34■■□□□ 1.33
CALD1-208ENST00000435928 PLEKHH1Q9ULM0 1364 aa23.34■■□□□ 1.33
CALD1-208ENST00000435928 NUTM2FA1L443 756 aa23.32■■□□□ 1.32
CALD1-208ENST00000435928 USP21Q9UK80 565 aa23.32■■□□□ 1.32
CALD1-208ENST00000435928 FOXO3O43524 673 aa23.31■■□□□ 1.32
CALD1-208ENST00000435928 XPCQ01831 940 aaPredicted RBP23.31■■□□□ 1.32
CALD1-208ENST00000435928 NRXN1Q9ULB1 1477 aa23.3■■□□□ 1.32
CALD1-208ENST00000435928 RGPD8O14715 1765 aaPredicted RBP23.3■■□□□ 1.32
CALD1-208ENST00000435928 FNBP4Q8N3X1 1017 aaPredicted RBP23.29■■□□□ 1.32
CALD1-208ENST00000435928 TRPC5Q9UL62 973 aaPredicted RBP23.29■■□□□ 1.32
CALD1-208ENST00000435928 ATRNO75882 1429 aa23.28■■□□□ 1.32
CALD1-208ENST00000435928 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.26■■□□□ 1.31
CALD1-208ENST00000435928 EP400Q96L91 3159 aa23.25■■□□□ 1.31
CALD1-208ENST00000435928 C14orf93Q9H972 538 aaKnown RBP23.25■■□□□ 1.31
CALD1-208ENST00000435928 ATAD2Q6PL18 1390 aa23.25■■□□□ 1.31
CALD1-208ENST00000435928 DHX57Q6P158 1386 aaKnown RBP23.24■■□□□ 1.31
CALD1-208ENST00000435928 RAB3GAP2Q9H2M9 1393 aa23.24■■□□□ 1.31
CALD1-208ENST00000435928 SIRT1Q96EB6 747 aa23.23■■□□□ 1.31
CALD1-208ENST00000435928 BCL9LQ86UU0 1499 aa23.23■■□□□ 1.31
CALD1-208ENST00000435928 USP32Q8NFA0 1604 aa23.22■■□□□ 1.31
CALD1-208ENST00000435928 CFAP70Q5T0N1 1121 aa23.22■■□□□ 1.31
CALD1-208ENST00000435928 DLC1Q96QB1 1528 aa23.2■■□□□ 1.3
CALD1-208ENST00000435928 SPATA31A3Q5VYP0 1347 aa23.2■■□□□ 1.3
CALD1-208ENST00000435928 ABCA3Q99758 1704 aa23.19■■□□□ 1.3
CALD1-208ENST00000435928 ADGRB2O60241 1585 aa23.18■■□□□ 1.3
CALD1-208ENST00000435928 TNS3Q68CZ2 1445 aa23.18■■□□□ 1.3
CALD1-208ENST00000435928 PRAM1Q96QH2 718 aa23.18■■□□□ 1.3
CALD1-208ENST00000435928 KRT28Q7Z3Y7 464 aa23.17■■□□□ 1.3
CALD1-208ENST00000435928 PHF8Q9UPP1 1060 aa23.17■■□□□ 1.3
CALD1-208ENST00000435928 ADGRB1O14514 1584 aa23.16■■□□□ 1.3
CALD1-208ENST00000435928 SAFB2Q14151 953 aaKnown RBP eCLIP23.16■■□□□ 1.3
CALD1-208ENST00000435928 SLIT2O94813 1529 aa23.15■■□□□ 1.3
CALD1-208ENST00000435928 PLCH1Q4KWH8 1693 aa23.15■■□□□ 1.3
CALD1-208ENST00000435928 HAP1P54257 671 aaPredicted RBP23.13■■□□□ 1.29
CALD1-208ENST00000435928 PSME1Q06323 249 aa23.13■■□□□ 1.29
CALD1-208ENST00000435928 GJD4Q96KN9 370 aaPredicted RBP23.13■■□□□ 1.29
CALD1-208ENST00000435928 POGKQ9P215 609 aa23.13■■□□□ 1.29
CALD1-208ENST00000435928 ANKARQ7Z5J8 1434 aa23.13■■□□□ 1.29
CALD1-208ENST00000435928 GLI3P10071 1580 aa23.13■■□□□ 1.29
CALD1-208ENST00000435928 NWD2Q9ULI1 1742 aa23.13■■□□□ 1.29
CALD1-208ENST00000435928 RALGAPBQ86X10 1494 aa23.11■■□□□ 1.29
CALD1-208ENST00000435928 UNC5CLQ8IV45 518 aa23.11■■□□□ 1.29
CALD1-208ENST00000435928 SBNO1A3KN83 1393 aa23.11■■□□□ 1.29
CALD1-208ENST00000435928 ARHGEF10O15013 1369 aa23.1■■□□□ 1.29
CALD1-208ENST00000435928 TRPM3Q9HCF6 1732 aaPredicted RBP23.09■■□□□ 1.29
CALD1-208ENST00000435928 BRWD3Q6RI45 1802 aa23.09■■□□□ 1.29
CALD1-208ENST00000435928 SRCAPQ6ZRS2 3230 aa23.08■■□□□ 1.28
CALD1-208ENST00000435928 EIF3AQ14152 1382 aaKnown RBP23.07■■□□□ 1.28
CALD1-208ENST00000435928 LMOD2Q6P5Q4 547 aa23.07■■□□□ 1.28
CALD1-208ENST00000435928 TRAK1Q9UPV9 953 aa23.07■■□□□ 1.28
CALD1-208ENST00000435928 PLEKHG5O94827 1062 aa23.06■■□□□ 1.28
CALD1-208ENST00000435928 CABLES1Q8TDN4 633 aa23.06■■□□□ 1.28
CALD1-208ENST00000435928 TULP4Q9NRJ4 1543 aa23.06■■□□□ 1.28
CALD1-208ENST00000435928 ALS2Q96Q42 1657 aa23.06■■□□□ 1.28
CALD1-208ENST00000435928 ARHGEF28Q8N1W1 1705 aaKnown RBP23.05■■□□□ 1.28
CALD1-208ENST00000435928 PMFBP1Q8TBY8 1022 aa23.05■■□□□ 1.28
CALD1-208ENST00000435928 DCAF11Q8TEB1 546 aa23.05■■□□□ 1.28
CALD1-208ENST00000435928 HIRIP3Q9BW71 556 aaPredicted RBP23.05■■□□□ 1.28
CALD1-208ENST00000435928 KDM2AQ9Y2K7 1162 aa23.05■■□□□ 1.28
CALD1-208ENST00000435928 ITSN1Q15811 1721 aa23.04■■□□□ 1.28
CALD1-208ENST00000435928 CCDC125Q86Z20 511 aa23.03■■□□□ 1.28
CALD1-208ENST00000435928 MINK1Q8N4C8 1332 aaPredicted RBP23.03■■□□□ 1.28
CALD1-208ENST00000435928 NRAPQ86VF7 1730 aa23.02■■□□□ 1.28
CALD1-208ENST00000435928 STAC3Q96MF2 364 aa23.01■■□□□ 1.27
CALD1-208ENST00000435928 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
CALD1-208ENST00000435928 VPS72Q15906 364 aa23■■□□□ 1.27
CALD1-208ENST00000435928 PRR36Q9H6K5 1346 aa22.99■■□□□ 1.27
CALD1-208ENST00000435928 CRYBG1Q9Y4K1 1723 aa22.99■■□□□ 1.27
CALD1-208ENST00000435928 COL14A1Q05707 1796 aaKnown RBP22.99■■□□□ 1.27
CALD1-208ENST00000435928 CCDC9Q9Y3X0 531 aaKnown RBP22.98■■□□□ 1.27
CALD1-208ENST00000435928 WASLO00401 505 aaPredicted RBP22.97■■□□□ 1.27
CALD1-208ENST00000435928 HRCP23327 699 aa22.97■■□□□ 1.27
CALD1-208ENST00000435928 ZRANB1Q9UGI0 708 aa22.97■■□□□ 1.27
CALD1-208ENST00000435928 BLMP54132 1417 aaPredicted RBP22.97■■□□□ 1.27
CALD1-208ENST00000435928 SEPT12Q8IYM1 358 aa22.95■■□□□ 1.26
CALD1-208ENST00000435928 KIAA1210Q9ULL0 1709 aa22.95■■□□□ 1.26
CALD1-208ENST00000435928 ATP7BP35670 1465 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms