RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SGIP1Q9BQI5 828 aa10.75□□□□□ -0.69
VTI1A-202ENST00000432306 MRS2Q9HD23 443 aa10.75□□□□□ -0.69
VTI1A-202ENST00000432306 ZMYM3Q14202 1370 aa10.75□□□□□ -0.69
VTI1A-202ENST00000432306 DHX29Q7Z478 1369 aaKnown RBP10.75□□□□□ -0.69
VTI1A-202ENST00000432306 CEP170BQ9Y4F5 1589 aaPredicted RBP10.75□□□□□ -0.69
VTI1A-202ENST00000432306 CLTCQ00610 1675 aaKnown RBP10.75□□□□□ -0.69
VTI1A-202ENST00000432306 C11orf95C9JLR9 678 aaPredicted RBP10.75□□□□□ -0.69
VTI1A-202ENST00000432306 USP35Q9P2H5 1018 aa10.75□□□□□ -0.69
VTI1A-202ENST00000432306 CDC42BPAQ5VT25 1732 aa10.74□□□□□ -0.69
VTI1A-202ENST00000432306 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
VTI1A-202ENST00000432306 SLC24A3Q9HC58 644 aa10.74□□□□□ -0.69
VTI1A-202ENST00000432306 MBD5Q9P267 1494 aa10.73□□□□□ -0.69
VTI1A-202ENST00000432306 KIF7Q2M1P5 1343 aa10.73□□□□□ -0.69
VTI1A-202ENST00000432306 TOM1O60784 492 aa10.73□□□□□ -0.69
VTI1A-202ENST00000432306 PAK3O75914 559 aaPredicted RBP10.73□□□□□ -0.69
VTI1A-202ENST00000432306 ANP32AP39687 249 aaKnown RBP10.73□□□□□ -0.69
VTI1A-202ENST00000432306 L3MBTL2Q969R5 705 aa10.73□□□□□ -0.69
VTI1A-202ENST00000432306 BCL11BQ9C0K0 894 aaPredicted RBP10.73□□□□□ -0.69
VTI1A-202ENST00000432306 ZC3H15Q8WU90 426 aaKnown RBP10.72□□□□□ -0.69
VTI1A-202ENST00000432306 MPHOSPH9Q99550 1183 aa10.72□□□□□ -0.69
VTI1A-202ENST00000432306 CCDC61Q9Y6R9 512 aa10.72□□□□□ -0.69
VTI1A-202ENST00000432306 SAMD9LQ8IVG5 1584 aa10.72□□□□□ -0.69
VTI1A-202ENST00000432306 CPS1P31327 1500 aa10.72□□□□□ -0.69
VTI1A-202ENST00000432306 KTN1Q86UP2 1357 aaKnown RBP10.72□□□□□ -0.69
VTI1A-202ENST00000432306 E9PSI1 815 aa10.72□□□□□ -0.69
VTI1A-202ENST00000432306 HSPA1LP34931 641 aa10.72□□□□□ -0.69
VTI1A-202ENST00000432306 STK24Q9Y6E0 443 aa10.72□□□□□ -0.69
VTI1A-202ENST00000432306 GTPBP6O43824 516 aaPredicted RBP10.71□□□□□ -0.69
VTI1A-202ENST00000432306 FOXD4L5Q5VV16 416 aaPredicted RBP10.71□□□□□ -0.69
VTI1A-202ENST00000432306 FOXD4L4Q8WXT5 416 aaPredicted RBP10.71□□□□□ -0.69
VTI1A-202ENST00000432306 ZNF428Q96B54 188 aa10.71□□□□□ -0.69
VTI1A-202ENST00000432306 ROCK2O75116 1388 aaKnown RBP10.71□□□□□ -0.7
VTI1A-202ENST00000432306 MFAP1P55081 439 aaKnown RBP10.7□□□□□ -0.7
VTI1A-202ENST00000432306 LRPPRCP42704 1394 aaKnown RBP10.7□□□□□ -0.7
VTI1A-202ENST00000432306 PIP4K2BP78356 416 aa10.7□□□□□ -0.7
VTI1A-202ENST00000432306 INSRP06213 1382 aa10.69□□□□□ -0.7
VTI1A-202ENST00000432306 SPAG9O60271 1321 aaKnown RBP10.69□□□□□ -0.7
VTI1A-202ENST00000432306 A2ML1A8K2U0 1454 aa10.69□□□□□ -0.7
VTI1A-202ENST00000432306 FAM9BQ8IZU0 186 aa10.69□□□□□ -0.7
VTI1A-202ENST00000432306 PLXNC1O60486 1568 aa10.69□□□□□ -0.7
VTI1A-202ENST00000432306 ATP7AQ04656 1500 aa10.68□□□□□ -0.7
VTI1A-202ENST00000432306 WASHC2CQ9Y4E1 1318 aa10.68□□□□□ -0.7
VTI1A-202ENST00000432306 DNMT1P26358 1616 aaKnown RBP10.68□□□□□ -0.7
VTI1A-202ENST00000432306 NBPF8Q3BBV2 869 aa10.68□□□□□ -0.7
VTI1A-202ENST00000432306 BCCIPQ9P287 314 aaKnown RBP eCLIP10.68□□□□□ -0.7
VTI1A-202ENST00000432306 TCERG1O14776 1098 aaKnown RBP10.67□□□□□ -0.7
VTI1A-202ENST00000432306 MS4A1P11836 297 aa10.67□□□□□ -0.7
VTI1A-202ENST00000432306 AEBP1Q8IUX7 1158 aa10.67□□□□□ -0.7
VTI1A-202ENST00000432306 PCDHB8Q9UN66 801 aa10.67□□□□□ -0.7
VTI1A-202ENST00000432306 PCDHB13Q9Y5F0 798 aa10.67□□□□□ -0.7
VTI1A-202ENST00000432306 ADGBQ8N7X0 1667 aa10.67□□□□□ -0.7
VTI1A-202ENST00000432306 SYCP2Q9BX26 1530 aa10.67□□□□□ -0.7
VTI1A-202ENST00000432306 A2MP01023 1474 aa10.67□□□□□ -0.7
VTI1A-202ENST00000432306 SHANK2Q9UPX8 1470 aa10.67□□□□□ -0.7
VTI1A-202ENST00000432306 INO80Q9ULG1 1556 aaPredicted RBP10.67□□□□□ -0.7
VTI1A-202ENST00000432306 RTL5Q5HYW3 569 aaPredicted RBP10.67□□□□□ -0.7
VTI1A-202ENST00000432306 RSPH4AQ5TD94 716 aa10.67□□□□□ -0.7
VTI1A-202ENST00000432306 ZNF467Q7Z7K2 595 aaPredicted RBP10.67□□□□□ -0.7
VTI1A-202ENST00000432306 CCDC82Q8N4S0 544 aa10.67□□□□□ -0.7
VTI1A-202ENST00000432306 CCDC136Q96JN2 1154 aa10.67□□□□□ -0.7
VTI1A-202ENST00000432306 DAPK1P53355 1430 aa10.65□□□□□ -0.7
VTI1A-202ENST00000432306 GGT6Q6P531 493 aa10.65□□□□□ -0.7
VTI1A-202ENST00000432306 PNISRQ8TF01 805 aaKnown RBP10.65□□□□□ -0.7
VTI1A-202ENST00000432306 ZNF777Q9ULD5 760 aaPredicted RBP10.65□□□□□ -0.7
VTI1A-202ENST00000432306 PLEKHH2Q8IVE3 1493 aa10.65□□□□□ -0.7
VTI1A-202ENST00000432306 NEURL4Q96JN8 1562 aa10.64□□□□□ -0.71
VTI1A-202ENST00000432306 BRD4O60885 1362 aaPredicted RBP10.64□□□□□ -0.71
VTI1A-202ENST00000432306 FAM177A1Q8N128 213 aaPredicted RBP10.64□□□□□ -0.71
VTI1A-202ENST00000432306 RRP7BPQ9NSQ0 103 aa10.64□□□□□ -0.71
VTI1A-202ENST00000432306 KIAA1107Q9UPP5 1409 aa10.63□□□□□ -0.71
VTI1A-202ENST00000432306 ABCC5O15440 1437 aa10.63□□□□□ -0.71
VTI1A-202ENST00000432306 HNRNPMP52272 730 aaKnown RBP eCLIP10.62□□□□□ -0.71
VTI1A-202ENST00000432306 PDE3BQ13370 1112 aa10.62□□□□□ -0.71
VTI1A-202ENST00000432306 ADGRL2O95490 1459 aa10.62□□□□□ -0.71
VTI1A-202ENST00000432306 PZPP20742 1482 aa10.62□□□□□ -0.71
VTI1A-202ENST00000432306 RALGAPBQ86X10 1494 aa10.62□□□□□ -0.71
VTI1A-202ENST00000432306 VWDEQ8N2E2 1590 aa10.61□□□□□ -0.71
VTI1A-202ENST00000432306 PPM1GO15355 546 aaPredicted RBP10.61□□□□□ -0.71
VTI1A-202ENST00000432306 PDAP1Q13442 181 aaKnown RBP10.61□□□□□ -0.71
VTI1A-202ENST00000432306 GPATCH8Q9UKJ3 1502 aaKnown RBP10.61□□□□□ -0.71
VTI1A-202ENST00000432306 DEPDC5O75140 1603 aa10.61□□□□□ -0.71
VTI1A-202ENST00000432306 ANKLE2Q86XL3 938 aa10.61□□□□□ -0.71
VTI1A-202ENST00000432306 ZNF579Q8NAF0 562 aaKnown RBP10.61□□□□□ -0.71
VTI1A-202ENST00000432306 FAM135AQ9P2D6 1515 aa10.6□□□□□ -0.71
VTI1A-202ENST00000432306 TNRQ92752 1358 aa10.6□□□□□ -0.71
VTI1A-202ENST00000432306 USP47Q96K76 1375 aa10.6□□□□□ -0.71
VTI1A-202ENST00000432306 KIF15Q9NS87 1388 aa10.6□□□□□ -0.71
VTI1A-202ENST00000432306 BACH2Q9BYV9 841 aa10.6□□□□□ -0.71
VTI1A-202ENST00000432306 RNF17Q9BXT8 1623 aaKnown RBP10.6□□□□□ -0.71
VTI1A-202ENST00000432306 ALKQ9UM73 1620 aa10.6□□□□□ -0.71
VTI1A-202ENST00000432306 RRP1P56182 461 aaKnown RBP10.59□□□□□ -0.71
VTI1A-202ENST00000432306 GZF1Q9H116 711 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-202ENST00000432306 CFDP1Q9UEE9 299 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-202ENST00000432306 SYNMO15061 1565 aa10.59□□□□□ -0.71
VTI1A-202ENST00000432306 IQGAP1P46940 1657 aa10.59□□□□□ -0.71
VTI1A-202ENST00000432306 MED14O60244 1454 aa10.59□□□□□ -0.71
VTI1A-202ENST00000432306 RALBP1Q15311 655 aa10.58□□□□□ -0.72
VTI1A-202ENST00000432306 IFNL1Q8IU54 200 aa10.58□□□□□ -0.72
VTI1A-202ENST00000432306 THEMISQ8N1K5 641 aaPredicted RBP10.58□□□□□ -0.72
VTI1A-202ENST00000432306 KIF12Q96FN5 646 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms