RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 PNPLA6Q8IY17 1366 aa17.69■□□□□ 0.42
TTC3-208ENST00000428693 RXRBP28702 533 aa17.69■□□□□ 0.42
TTC3-208ENST00000428693 XPCQ01831 940 aaPredicted RBP17.69■□□□□ 0.42
TTC3-208ENST00000428693 LRPPRCP42704 1394 aaKnown RBP17.68■□□□□ 0.42
TTC3-208ENST00000428693 NGLY1Q96IV0 654 aa17.68■□□□□ 0.42
TTC3-208ENST00000428693 IFT172Q9UG01 1749 aa17.68■□□□□ 0.42
TTC3-208ENST00000428693 PIK3C2GO75747 1445 aa17.67■□□□□ 0.42
TTC3-208ENST00000428693 SAFB2Q14151 953 aaKnown RBP eCLIP17.67■□□□□ 0.42
TTC3-208ENST00000428693 CFAP70Q5T0N1 1121 aa17.67■□□□□ 0.42
TTC3-208ENST00000428693 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
TTC3-208ENST00000428693 FOXO3O43524 673 aa17.66■□□□□ 0.42
TTC3-208ENST00000428693 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
TTC3-208ENST00000428693 PRAG1Q86YV5 1406 aa17.65■□□□□ 0.42
TTC3-208ENST00000428693 YTHDC2Q9H6S0 1430 aaKnown RBP17.65■□□□□ 0.42
TTC3-208ENST00000428693 SOS2Q07890 1332 aaPredicted RBP17.65■□□□□ 0.42
TTC3-208ENST00000428693 NPHP3Q7Z494 1330 aa17.65■□□□□ 0.42
TTC3-208ENST00000428693 ABCC11Q96J66 1382 aa17.65■□□□□ 0.42
TTC3-208ENST00000428693 C14orf93Q9H972 538 aaKnown RBP17.64■□□□□ 0.41
TTC3-208ENST00000428693 QTRT2Q9H974 415 aaKnown RBP17.64■□□□□ 0.41
TTC3-208ENST00000428693 DHX57Q6P158 1386 aaKnown RBP17.64■□□□□ 0.41
TTC3-208ENST00000428693 CDC42BPGQ6DT37 1551 aa17.63■□□□□ 0.41
TTC3-208ENST00000428693 POGKQ9P215 609 aa17.63■□□□□ 0.41
TTC3-208ENST00000428693 PLEKHG5O94827 1062 aa17.62■□□□□ 0.41
TTC3-208ENST00000428693 TECPR2O15040 1411 aa17.62■□□□□ 0.41
TTC3-208ENST00000428693 DCAF11Q8TEB1 546 aa17.61■□□□□ 0.41
TTC3-208ENST00000428693 PRAM1Q96QH2 718 aa17.61■□□□□ 0.41
TTC3-208ENST00000428693 KNDC1Q76NI1 1749 aa17.59■□□□□ 0.41
TTC3-208ENST00000428693 USP21Q9UK80 565 aa17.59■□□□□ 0.41
TTC3-208ENST00000428693 MYOM2P54296 1465 aa17.58■□□□□ 0.41
TTC3-208ENST00000428693 TRAK1Q9UPV9 953 aa17.58■□□□□ 0.4
TTC3-208ENST00000428693 LAMC1P11047 1609 aa17.58■□□□□ 0.4
TTC3-208ENST00000428693 RBM6P78332 1123 aaKnown RBP17.57■□□□□ 0.4
TTC3-208ENST00000428693 LMOD2Q6P5Q4 547 aa17.57■□□□□ 0.4
TTC3-208ENST00000428693 HAP1P54257 671 aaPredicted RBP17.56■□□□□ 0.4
TTC3-208ENST00000428693 KRT28Q7Z3Y7 464 aa17.56■□□□□ 0.4
TTC3-208ENST00000428693 SIRT1Q96EB6 747 aa17.56■□□□□ 0.4
TTC3-208ENST00000428693 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
TTC3-208ENST00000428693 NRXN1Q9ULB1 1477 aa17.56■□□□□ 0.4
TTC3-208ENST00000428693 UPF1Q92900 1129 aaKnown RBP eCLIP17.55■□□□□ 0.4
TTC3-208ENST00000428693 PHF8Q9UPP1 1060 aa17.55■□□□□ 0.4
TTC3-208ENST00000428693 PXDNQ92626 1479 aa17.55■□□□□ 0.4
TTC3-208ENST00000428693 FMN2Q9NZ56 1722 aa17.55■□□□□ 0.4
TTC3-208ENST00000428693 TRPC5Q9UL62 973 aaPredicted RBP17.54■□□□□ 0.4
TTC3-208ENST00000428693 MINK1Q8N4C8 1332 aaPredicted RBP17.53■□□□□ 0.4
TTC3-208ENST00000428693 PSME1Q06323 249 aa17.53■□□□□ 0.4
TTC3-208ENST00000428693 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.4
TTC3-208ENST00000428693 RGPD8O14715 1765 aaPredicted RBP17.52■□□□□ 0.4
TTC3-208ENST00000428693 RGS12O14924 1447 aa17.51■□□□□ 0.39
TTC3-208ENST00000428693 HRCP23327 699 aa17.51■□□□□ 0.39
TTC3-208ENST00000428693 COL22A1Q8NFW1 1626 aaPredicted RBP17.5■□□□□ 0.39
TTC3-208ENST00000428693 CDK12Q9NYV4 1490 aaPredicted RBP17.5■□□□□ 0.39
TTC3-208ENST00000428693 KIF1AQ12756 1690 aa17.5■□□□□ 0.39
TTC3-208ENST00000428693 SPATA31A3Q5VYP0 1347 aa17.49■□□□□ 0.39
TTC3-208ENST00000428693 FNBP4Q8N3X1 1017 aaPredicted RBP17.49■□□□□ 0.39
TTC3-208ENST00000428693 CABLES1Q8TDN4 633 aa17.48■□□□□ 0.39
TTC3-208ENST00000428693 DLC1Q96QB1 1528 aa17.47■□□□□ 0.39
TTC3-208ENST00000428693 STAC3Q96MF2 364 aa17.46■□□□□ 0.39
TTC3-208ENST00000428693 ADGRB1O14514 1584 aa17.45■□□□□ 0.38
TTC3-208ENST00000428693 TNS3Q68CZ2 1445 aa17.45■□□□□ 0.38
TTC3-208ENST00000428693 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
TTC3-208ENST00000428693 ATRNO75882 1429 aa17.44■□□□□ 0.38
TTC3-208ENST00000428693 MARF1Q9Y4F3 1742 aaKnown RBP17.44■□□□□ 0.38
TTC3-208ENST00000428693 WASLO00401 505 aaPredicted RBP17.43■□□□□ 0.38
TTC3-208ENST00000428693 PAK3O75914 559 aaPredicted RBP17.43■□□□□ 0.38
TTC3-208ENST00000428693 NGDNQ8NEJ9 315 aaKnown RBP17.43■□□□□ 0.38
TTC3-208ENST00000428693 GPRASP1Q5JY77 1395 aa17.42■□□□□ 0.38
TTC3-208ENST00000428693 ANKARQ7Z5J8 1434 aa17.42■□□□□ 0.38
TTC3-208ENST00000428693 UNC5CLQ8IV45 518 aa17.42■□□□□ 0.38
TTC3-208ENST00000428693 GJD4Q96KN9 370 aaPredicted RBP17.42■□□□□ 0.38
TTC3-208ENST00000428693 BCL9LQ86UU0 1499 aa17.42■□□□□ 0.38
TTC3-208ENST00000428693 EIF3AQ14152 1382 aaKnown RBP17.41■□□□□ 0.38
TTC3-208ENST00000428693 ATAD2Q6PL18 1390 aa17.41■□□□□ 0.38
TTC3-208ENST00000428693 SBNO1A3KN83 1393 aa17.4■□□□□ 0.38
TTC3-208ENST00000428693 ARHGEF10O15013 1369 aa17.4■□□□□ 0.38
TTC3-208ENST00000428693 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
TTC3-208ENST00000428693 USP32Q8NFA0 1604 aa17.39■□□□□ 0.38
TTC3-208ENST00000428693 ADGRB2O60241 1585 aa17.39■□□□□ 0.37
TTC3-208ENST00000428693 A0A0G2JS52 829 aa17.38■□□□□ 0.37
TTC3-208ENST00000428693 MYT1Q01538 1121 aa17.38■□□□□ 0.37
TTC3-208ENST00000428693 TULP4Q9NRJ4 1543 aa17.37■□□□□ 0.37
TTC3-208ENST00000428693 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
TTC3-208ENST00000428693 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
TTC3-208ENST00000428693 CDK19Q9BWU1 502 aa17.36■□□□□ 0.37
TTC3-208ENST00000428693 ARHGEF28Q8N1W1 1705 aaKnown RBP17.35■□□□□ 0.37
TTC3-208ENST00000428693 NEUROD1Q13562 356 aa17.35■□□□□ 0.37
TTC3-208ENST00000428693 SLIT2O94813 1529 aa17.35■□□□□ 0.37
TTC3-208ENST00000428693 FAM83GA6ND36 823 aa17.34■□□□□ 0.37
TTC3-208ENST00000428693 RALGAPBQ86X10 1494 aa17.34■□□□□ 0.37
TTC3-208ENST00000428693 SRPK2P78362 688 aaKnown RBP17.32■□□□□ 0.36
TTC3-208ENST00000428693 NUTM2GQ5VZR2 741 aa17.32■□□□□ 0.36
TTC3-208ENST00000428693 BTG4Q9NY30 223 aa17.32■□□□□ 0.36
TTC3-208ENST00000428693 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.32■□□□□ 0.36
TTC3-208ENST00000428693 VPS72Q15906 364 aa17.31■□□□□ 0.36
TTC3-208ENST00000428693 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
TTC3-208ENST00000428693 SIN3AQ96ST3 1273 aa17.31■□□□□ 0.36
TTC3-208ENST00000428693 PLCH1Q4KWH8 1693 aa17.31■□□□□ 0.36
TTC3-208ENST00000428693 ABCA3Q99758 1704 aa17.3■□□□□ 0.36
TTC3-208ENST00000428693 GLI3P10071 1580 aa17.3■□□□□ 0.36
TTC3-208ENST00000428693 ITSN1Q15811 1721 aa17.3■□□□□ 0.36
TTC3-208ENST00000428693 TRPM3Q9HCF6 1732 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms