RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 ZNF326Q5BKZ1 582 aaKnown RBP12.46□□□□□ -0.41
CSTF1-203ENST00000428552 GLI3P10071 1580 aa12.46□□□□□ -0.42
CSTF1-203ENST00000428552 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
CSTF1-203ENST00000428552 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.44□□□□□ -0.42
CSTF1-203ENST00000428552 GJD4Q96KN9 370 aaPredicted RBP12.43□□□□□ -0.42
CSTF1-203ENST00000428552 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
CSTF1-203ENST00000428552 SLIT2O94813 1529 aa12.42□□□□□ -0.42
CSTF1-203ENST00000428552 RALGAPBQ86X10 1494 aa12.42□□□□□ -0.42
CSTF1-203ENST00000428552 HFM1A2PYH4 1435 aa12.42□□□□□ -0.42
CSTF1-203ENST00000428552 LRP5O75197 1615 aa12.41□□□□□ -0.42
CSTF1-203ENST00000428552 BLMP54132 1417 aaPredicted RBP12.41□□□□□ -0.42
CSTF1-203ENST00000428552 KIF1BO60333 1816 aa12.41□□□□□ -0.42
CSTF1-203ENST00000428552 BRWD3Q6RI45 1802 aa12.41□□□□□ -0.42
CSTF1-203ENST00000428552 XPCQ01831 940 aaPredicted RBP12.4□□□□□ -0.42
CSTF1-203ENST00000428552 NPHP3Q7Z494 1330 aa12.39□□□□□ -0.43
CSTF1-203ENST00000428552 FOXD1Q16676 465 aa12.39□□□□□ -0.43
CSTF1-203ENST00000428552 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
CSTF1-203ENST00000428552 PPLO60437 1756 aa12.38□□□□□ -0.43
CSTF1-203ENST00000428552 FOXO3O43524 673 aa12.38□□□□□ -0.43
CSTF1-203ENST00000428552 ESCO1Q5FWF5 840 aa12.38□□□□□ -0.43
CSTF1-203ENST00000428552 ITGAEP38570 1179 aa12.37□□□□□ -0.43
CSTF1-203ENST00000428552 UNC5CLQ8IV45 518 aa12.37□□□□□ -0.43
CSTF1-203ENST00000428552 USP32Q8NFA0 1604 aa12.37□□□□□ -0.43
CSTF1-203ENST00000428552 NAIPQ13075 1403 aa12.37□□□□□ -0.43
CSTF1-203ENST00000428552 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
CSTF1-203ENST00000428552 TECPR2O15040 1411 aa12.35□□□□□ -0.43
CSTF1-203ENST00000428552 SPATA31A3Q5VYP0 1347 aa12.35□□□□□ -0.43
CSTF1-203ENST00000428552 RPGRIP1LQ68CZ1 1315 aa12.34□□□□□ -0.43
CSTF1-203ENST00000428552 FMN2Q9NZ56 1722 aa12.34□□□□□ -0.43
CSTF1-203ENST00000428552 PLEKHH1Q9ULM0 1364 aa12.33□□□□□ -0.44
CSTF1-203ENST00000428552 ONECUT3O60422 494 aaPredicted RBP12.33□□□□□ -0.44
CSTF1-203ENST00000428552 SEPT12Q8IYM1 358 aa12.33□□□□□ -0.44
CSTF1-203ENST00000428552 PLCH1Q4KWH8 1693 aa12.32□□□□□ -0.44
CSTF1-203ENST00000428552 ABCA3Q99758 1704 aa12.32□□□□□ -0.44
CSTF1-203ENST00000428552 NUTM2FA1L443 756 aa12.32□□□□□ -0.44
CSTF1-203ENST00000428552 WAPLQ7Z5K2 1190 aa12.32□□□□□ -0.44
CSTF1-203ENST00000428552 LRPPRCP42704 1394 aaKnown RBP12.31□□□□□ -0.44
CSTF1-203ENST00000428552 VPS72Q15906 364 aa12.31□□□□□ -0.44
CSTF1-203ENST00000428552 KIF1AQ12756 1690 aa12.31□□□□□ -0.44
CSTF1-203ENST00000428552 ADGRF5Q8IZF2 1346 aa12.31□□□□□ -0.44
CSTF1-203ENST00000428552 KNDC1Q76NI1 1749 aa12.31□□□□□ -0.44
CSTF1-203ENST00000428552 NWD2Q9ULI1 1742 aa12.31□□□□□ -0.44
CSTF1-203ENST00000428552 HRCP23327 699 aa12.3□□□□□ -0.44
CSTF1-203ENST00000428552 CCDC144AA2RUR9 1427 aa12.29□□□□□ -0.44
CSTF1-203ENST00000428552 PSDA5PKW4 1024 aaPredicted RBP12.29□□□□□ -0.44
CSTF1-203ENST00000428552 CABLES1Q8TDN4 633 aa12.29□□□□□ -0.44
CSTF1-203ENST00000428552 ABCC11Q96J66 1382 aa12.29□□□□□ -0.44
CSTF1-203ENST00000428552 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
CSTF1-203ENST00000428552 NRAPQ86VF7 1730 aa12.28□□□□□ -0.44
CSTF1-203ENST00000428552 IFT172Q9UG01 1749 aa12.28□□□□□ -0.44
CSTF1-203ENST00000428552 KRT28Q7Z3Y7 464 aa12.28□□□□□ -0.44
CSTF1-203ENST00000428552 KRT27Q7Z3Y8 459 aa12.28□□□□□ -0.44
CSTF1-203ENST00000428552 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
CSTF1-203ENST00000428552 RRBP1Q9P2E9 1410 aaKnown RBP12.28□□□□□ -0.44
CSTF1-203ENST00000428552 STK26Q9P289 416 aa12.27□□□□□ -0.45
CSTF1-203ENST00000428552 SPATA31E1Q6ZUB1 1445 aa12.27□□□□□ -0.45
CSTF1-203ENST00000428552 SF3B2Q13435 895 aaKnown RBP12.26□□□□□ -0.45
CSTF1-203ENST00000428552 TMEM132EQ6IEE7 984 aa12.26□□□□□ -0.45
CSTF1-203ENST00000428552 PPARGC1BQ86YN6 1023 aaKnown RBP12.26□□□□□ -0.45
CSTF1-203ENST00000428552 FAM83GA6ND36 823 aa12.25□□□□□ -0.45
CSTF1-203ENST00000428552 SBNO1A3KN83 1393 aa12.25□□□□□ -0.45
CSTF1-203ENST00000428552 PIK3C2GO75747 1445 aa12.25□□□□□ -0.45
CSTF1-203ENST00000428552 NRXN1Q9ULB1 1477 aa12.25□□□□□ -0.45
CSTF1-203ENST00000428552 YTHDC2Q9H6S0 1430 aaKnown RBP12.24□□□□□ -0.45
CSTF1-203ENST00000428552 TNS1Q9HBL0 1735 aaKnown RBP12.24□□□□□ -0.45
CSTF1-203ENST00000428552 DISP2A7MBM2 1401 aa12.23□□□□□ -0.45
CSTF1-203ENST00000428552 PHF8Q9UPP1 1060 aa12.23□□□□□ -0.45
CSTF1-203ENST00000428552 RGPD1P0DJD0 1748 aa12.23□□□□□ -0.45
CSTF1-203ENST00000428552 TRPM3Q9HCF6 1732 aaPredicted RBP12.23□□□□□ -0.45
CSTF1-203ENST00000428552 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
CSTF1-203ENST00000428552 BAG6P46379 1132 aa12.22□□□□□ -0.45
CSTF1-203ENST00000428552 EN1Q05925 392 aaPredicted RBP12.22□□□□□ -0.45
CSTF1-203ENST00000428552 FAM98CQ17RN3 349 aaKnown RBP12.22□□□□□ -0.45
CSTF1-203ENST00000428552 SLC4A1APQ9BWU0 796 aaKnown RBP12.22□□□□□ -0.45
CSTF1-203ENST00000428552 ANKRD30BQ9BXX2 1392 aa12.21□□□□□ -0.45
CSTF1-203ENST00000428552 CRYBG1Q9Y4K1 1723 aa12.21□□□□□ -0.45
CSTF1-203ENST00000428552 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
CSTF1-203ENST00000428552 FAM182BQ5T319 152 aa12.21□□□□□ -0.45
CSTF1-203ENST00000428552 SIRT1Q96EB6 747 aa12.21□□□□□ -0.45
CSTF1-203ENST00000428552 CCDC9Q9Y3X0 531 aaKnown RBP12.21□□□□□ -0.45
CSTF1-203ENST00000428552 ARHGEF10O15013 1369 aa12.2□□□□□ -0.46
CSTF1-203ENST00000428552 ALS2Q96Q42 1657 aa12.2□□□□□ -0.46
CSTF1-203ENST00000428552 R3HDM1Q15032 1099 aaKnown RBP12.2□□□□□ -0.46
CSTF1-203ENST00000428552 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
CSTF1-203ENST00000428552 PSME1Q06323 249 aa12.19□□□□□ -0.46
CSTF1-203ENST00000428552 RGL3Q3MIN7 710 aa12.19□□□□□ -0.46
CSTF1-203ENST00000428552 COL14A1Q05707 1796 aaKnown RBP12.19□□□□□ -0.46
CSTF1-203ENST00000428552 BTG4Q9NY30 223 aa12.18□□□□□ -0.46
CSTF1-203ENST00000428552 SPATA31A5Q5VU36 1347 aa12.17□□□□□ -0.46
CSTF1-203ENST00000428552 SPATA31A7Q8IWB4 1347 aa12.17□□□□□ -0.46
CSTF1-203ENST00000428552 EZH2Q15910 746 aaKnown RBP12.17□□□□□ -0.46
CSTF1-203ENST00000428552 CAMKK2Q96RR4 588 aa12.17□□□□□ -0.46
CSTF1-203ENST00000428552 C14orf93Q9H972 538 aaKnown RBP12.17□□□□□ -0.46
CSTF1-203ENST00000428552 ADGRB2O60241 1585 aa12.17□□□□□ -0.46
CSTF1-203ENST00000428552 LMOD2Q6P5Q4 547 aa12.16□□□□□ -0.46
CSTF1-203ENST00000428552 PMFBP1Q8TBY8 1022 aa12.16□□□□□ -0.46
CSTF1-203ENST00000428552 ANKARQ7Z5J8 1434 aa12.16□□□□□ -0.46
CSTF1-203ENST00000428552 A0A0G2JS52 829 aa12.15□□□□□ -0.46
CSTF1-203ENST00000428552 MYT1Q01538 1121 aa12.15□□□□□ -0.46
CSTF1-203ENST00000428552 RREB1Q92766 1687 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms