RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 SETD1BQ9UPS6 1966 aaKnown RBP11.97□□□□□ -0.49
ABCA8-202ENST00000428549 MROH2AA6NES4 1674 aa11.97□□□□□ -0.49
ABCA8-202ENST00000428549 E9PCH4 1651 aa11.97□□□□□ -0.49
ABCA8-202ENST00000428549 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
ABCA8-202ENST00000428549 DNAJC2Q99543 621 aaKnown RBP11.97□□□□□ -0.49
ABCA8-202ENST00000428549 ABCC3O15438 1527 aa11.96□□□□□ -0.5
ABCA8-202ENST00000428549 CEP152O94986 1710 aa11.96□□□□□ -0.5
ABCA8-202ENST00000428549 TONSLQ96HA7 1378 aa11.95□□□□□ -0.5
ABCA8-202ENST00000428549 C3P01024 1663 aa11.95□□□□□ -0.5
ABCA8-202ENST00000428549 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
ABCA8-202ENST00000428549 NAP1L2Q9ULW6 460 aaPredicted RBP11.95□□□□□ -0.5
ABCA8-202ENST00000428549 ZNF316A6NFI3 1004 aaPredicted RBP11.94□□□□□ -0.5
ABCA8-202ENST00000428549 CANXP27824 592 aaKnown RBP11.94□□□□□ -0.5
ABCA8-202ENST00000428549 EXOC8Q8IYI6 725 aa11.94□□□□□ -0.5
ABCA8-202ENST00000428549 NPATQ14207 1427 aa11.94□□□□□ -0.5
ABCA8-202ENST00000428549 CAMSAP1Q5T5Y3 1602 aa11.94□□□□□ -0.5
ABCA8-202ENST00000428549 SPHKAPQ2M3C7 1700 aa11.94□□□□□ -0.5
ABCA8-202ENST00000428549 PTPRTO14522 1441 aa11.93□□□□□ -0.5
ABCA8-202ENST00000428549 HSP90AB4PQ58FF6 505 aa11.93□□□□□ -0.5
ABCA8-202ENST00000428549 GPATCH11Q8N954 259 aa11.93□□□□□ -0.5
ABCA8-202ENST00000428549 SLC24A3Q9HC58 644 aa11.93□□□□□ -0.5
ABCA8-202ENST00000428549 TRPM2O94759 1503 aa11.93□□□□□ -0.5
ABCA8-202ENST00000428549 PLA2R1Q13018 1463 aa11.93□□□□□ -0.5
ABCA8-202ENST00000428549 RGL2O15211 777 aa11.93□□□□□ -0.5
ABCA8-202ENST00000428549 NEFMP07197 916 aa11.93□□□□□ -0.5
ABCA8-202ENST00000428549 FBXO31Q5XUX0 539 aaPredicted RBP11.93□□□□□ -0.5
ABCA8-202ENST00000428549 CCDC144AA2RUR9 1427 aa11.92□□□□□ -0.5
ABCA8-202ENST00000428549 ARHGAP31Q2M1Z3 1444 aa11.92□□□□□ -0.5
ABCA8-202ENST00000428549 IPO4Q8TEX9 1081 aaKnown RBP11.91□□□□□ -0.5
ABCA8-202ENST00000428549 SALL2Q9Y467 1007 aaPredicted RBP11.91□□□□□ -0.5
ABCA8-202ENST00000428549 UHRF1BP1Q6BDS2 1440 aa11.9□□□□□ -0.5
ABCA8-202ENST00000428549 PTMAP06454 111 aaKnown RBP11.89□□□□□ -0.51
ABCA8-202ENST00000428549 NEURL4Q96JN8 1562 aa11.89□□□□□ -0.51
ABCA8-202ENST00000428549 TNRQ92752 1358 aa11.89□□□□□ -0.51
ABCA8-202ENST00000428549 LOC102724159A0A0B4J2E5 919 aa11.89□□□□□ -0.51
ABCA8-202ENST00000428549 PWP2Q15269 919 aaKnown RBP11.89□□□□□ -0.51
ABCA8-202ENST00000428549 WWC1Q8IX03 1113 aa11.89□□□□□ -0.51
ABCA8-202ENST00000428549 LMTK3Q96Q04 1460 aa11.88□□□□□ -0.51
ABCA8-202ENST00000428549 PPP1R15AO75807 674 aaPredicted RBP11.88□□□□□ -0.51
ABCA8-202ENST00000428549 DEKP35659 375 aaKnown RBP11.88□□□□□ -0.51
ABCA8-202ENST00000428549 SECISBP2LQ93073 1101 aaKnown RBP11.88□□□□□ -0.51
ABCA8-202ENST00000428549 PREX1Q8TCU6 1659 aa11.87□□□□□ -0.51
ABCA8-202ENST00000428549 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
ABCA8-202ENST00000428549 CFAP65Q6ZU64 1925 aaKnown RBP11.87□□□□□ -0.51
ABCA8-202ENST00000428549 NOS1P29475 1434 aa11.86□□□□□ -0.51
ABCA8-202ENST00000428549 HSPA2P54652 639 aa11.86□□□□□ -0.51
ABCA8-202ENST00000428549 CLTCL1P53675 1640 aa11.86□□□□□ -0.51
ABCA8-202ENST00000428549 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
ABCA8-202ENST00000428549 L3MBTL2Q969R5 705 aa11.86□□□□□ -0.51
ABCA8-202ENST00000428549 SPINK5Q9NQ38 1064 aaPredicted RBP11.86□□□□□ -0.51
ABCA8-202ENST00000428549 RIPOR2Q9Y4F9 1068 aa11.86□□□□□ -0.51
ABCA8-202ENST00000428549 ERVK-7P63135 1459 aa11.86□□□□□ -0.51
ABCA8-202ENST00000428549 FAM43BQ6ZT52 329 aaPredicted RBP11.85□□□□□ -0.51
ABCA8-202ENST00000428549 ZC3H15Q8WU90 426 aaKnown RBP11.85□□□□□ -0.51
ABCA8-202ENST00000428549 FBXW7Q969H0 707 aa11.84□□□□□ -0.51
ABCA8-202ENST00000428549 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
ABCA8-202ENST00000428549 SPATA31E1Q6ZUB1 1445 aa11.84□□□□□ -0.51
ABCA8-202ENST00000428549 NLRP1Q9C000 1473 aa11.84□□□□□ -0.51
ABCA8-202ENST00000428549 PIK3C2BO00750 1634 aa11.83□□□□□ -0.52
ABCA8-202ENST00000428549 ANKRD13AQ8IZ07 590 aa11.83□□□□□ -0.52
ABCA8-202ENST00000428549 A2ML1A8K2U0 1454 aa11.83□□□□□ -0.52
ABCA8-202ENST00000428549 THEMISQ8N1K5 641 aaPredicted RBP11.82□□□□□ -0.52
ABCA8-202ENST00000428549 SYNMO15061 1565 aa11.82□□□□□ -0.52
ABCA8-202ENST00000428549 KIF1BO60333 1816 aa11.82□□□□□ -0.52
ABCA8-202ENST00000428549 SLC52A1Q9NWF4 448 aa11.82□□□□□ -0.52
ABCA8-202ENST00000428549 MYO3AQ8NEV4 1616 aa11.81□□□□□ -0.52
ABCA8-202ENST00000428549 NOL8Q76FK4 1167 aaKnown RBP11.81□□□□□ -0.52
ABCA8-202ENST00000428549 ADGRB3O60242 1522 aa11.81□□□□□ -0.52
ABCA8-202ENST00000428549 CEP170BQ9Y4F5 1589 aaPredicted RBP11.81□□□□□ -0.52
ABCA8-202ENST00000428549 UGGT1Q9NYU2 1555 aa11.8□□□□□ -0.52
ABCA8-202ENST00000428549 IDI1Q13907 227 aa11.8□□□□□ -0.52
ABCA8-202ENST00000428549 STAC3Q96MF2 364 aa11.8□□□□□ -0.52
ABCA8-202ENST00000428549 CAPN15O75808 1086 aa11.79□□□□□ -0.52
ABCA8-202ENST00000428549 WDR70Q9NW82 654 aa11.79□□□□□ -0.52
ABCA8-202ENST00000428549 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
ABCA8-202ENST00000428549 AMOTL2Q9Y2J4 779 aa11.79□□□□□ -0.52
ABCA8-202ENST00000428549 ZNF142P52746 1687 aaPredicted RBP11.79□□□□□ -0.52
ABCA8-202ENST00000428549 FTSJ3Q8IY81 847 aaKnown RBP11.78□□□□□ -0.52
ABCA8-202ENST00000428549 LAS1LQ9Y4W2 734 aaKnown RBP11.78□□□□□ -0.52
ABCA8-202ENST00000428549 SMARCA5O60264 1052 aaPredicted RBP11.77□□□□□ -0.53
ABCA8-202ENST00000428549 BARGINQ6ZT62 677 aa11.77□□□□□ -0.53
ABCA8-202ENST00000428549 TMTC2Q8N394 836 aa11.77□□□□□ -0.53
ABCA8-202ENST00000428549 OS9Q13438 667 aaPredicted RBP11.76□□□□□ -0.53
ABCA8-202ENST00000428549 ANKLE2Q86XL3 938 aa11.76□□□□□ -0.53
ABCA8-202ENST00000428549 SPATA32Q96LK8 384 aa11.76□□□□□ -0.53
ABCA8-202ENST00000428549 KCNG1Q9UIX4 513 aa11.76□□□□□ -0.53
ABCA8-202ENST00000428549 IFT172Q9UG01 1749 aa11.76□□□□□ -0.53
ABCA8-202ENST00000428549 MYOM2P54296 1465 aa11.76□□□□□ -0.53
ABCA8-202ENST00000428549 RALGAPBQ86X10 1494 aa11.76□□□□□ -0.53
ABCA8-202ENST00000428549 PRAG1Q86YV5 1406 aa11.76□□□□□ -0.53
ABCA8-202ENST00000428549 NBPF8Q3BBV2 869 aa11.75□□□□□ -0.53
ABCA8-202ENST00000428549 RGL3Q3MIN7 710 aa11.75□□□□□ -0.53
ABCA8-202ENST00000428549 IL27Q8NEV9 243 aa11.75□□□□□ -0.53
ABCA8-202ENST00000428549 DCAF11Q8TEB1 546 aa11.75□□□□□ -0.53
ABCA8-202ENST00000428549 NCKAP5LQ9HCH0 1330 aa11.75□□□□□ -0.53
ABCA8-202ENST00000428549 BRD1O95696 1058 aa11.75□□□□□ -0.53
ABCA8-202ENST00000428549 RPGRIP1LQ68CZ1 1315 aa11.74□□□□□ -0.53
ABCA8-202ENST00000428549 IRF5Q13568 498 aa11.74□□□□□ -0.53
ABCA8-202ENST00000428549 MYH16Q9H6N6 1097 aa11.74□□□□□ -0.53
ABCA8-202ENST00000428549 TMEM131LA2VDJ0 1609 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms