RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 AKAP17AQ02040 695 aaKnown RBP11.99□□□□□ -0.49
SNX13-203ENST00000428135 MTHFSP49914 203 aa11.99□□□□□ -0.49
SNX13-203ENST00000428135 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
SNX13-203ENST00000428135 PDE3BQ13370 1112 aa11.98□□□□□ -0.49
SNX13-203ENST00000428135 DDX58O95786 925 aaKnown RBP11.98□□□□□ -0.49
SNX13-203ENST00000428135 NOC3LQ8WTT2 800 aaKnown RBP11.98□□□□□ -0.49
SNX13-203ENST00000428135 ST18O60284 1047 aa11.98□□□□□ -0.49
SNX13-203ENST00000428135 FYCO1Q9BQS8 1478 aa11.98□□□□□ -0.49
SNX13-203ENST00000428135 RRP1P56182 461 aaKnown RBP11.98□□□□□ -0.49
SNX13-203ENST00000428135 ANO2Q9NQ90 1003 aa11.98□□□□□ -0.49
SNX13-203ENST00000428135 G3BP1Q13283 466 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNX13-203ENST00000428135 SF3B2Q13435 895 aaKnown RBP11.98□□□□□ -0.49
SNX13-203ENST00000428135 GPRASP1Q5JY77 1395 aa11.97□□□□□ -0.49
SNX13-203ENST00000428135 MAGI1Q96QZ7 1491 aaPredicted RBP11.97□□□□□ -0.49
SNX13-203ENST00000428135 WAPLQ7Z5K2 1190 aa11.97□□□□□ -0.49
SNX13-203ENST00000428135 PANK1Q8TE04 598 aa11.97□□□□□ -0.49
SNX13-203ENST00000428135 KIF7Q2M1P5 1343 aa11.96□□□□□ -0.49
SNX13-203ENST00000428135 TOM1L2Q6ZVM7 507 aa11.96□□□□□ -0.49
SNX13-203ENST00000428135 RUNDC1Q96C34 613 aa11.96□□□□□ -0.49
SNX13-203ENST00000428135 LNPKQ9C0E8 428 aa11.96□□□□□ -0.49
SNX13-203ENST00000428135 ADGRL1O94910 1474 aa11.96□□□□□ -0.5
SNX13-203ENST00000428135 DZIP1LQ8IYY4 767 aaKnown RBP11.96□□□□□ -0.5
SNX13-203ENST00000428135 TCEAL9Q9UHQ7 104 aa11.95□□□□□ -0.5
SNX13-203ENST00000428135 STK11IPQ8N1F8 1099 aa11.95□□□□□ -0.5
SNX13-203ENST00000428135 SYNE3Q6ZMZ3 975 aa11.95□□□□□ -0.5
SNX13-203ENST00000428135 AMOTL1Q8IY63 956 aa11.95□□□□□ -0.5
SNX13-203ENST00000428135 SLC12A5Q9H2X9 1139 aa11.95□□□□□ -0.5
SNX13-203ENST00000428135 FAM161AQ3B820 660 aa11.95□□□□□ -0.5
SNX13-203ENST00000428135 CDK19Q9BWU1 502 aa11.95□□□□□ -0.5
SNX13-203ENST00000428135 CWC22Q9HCG8 908 aaKnown RBP11.95□□□□□ -0.5
SNX13-203ENST00000428135 CABP1Q9NZU7 370 aa11.94□□□□□ -0.5
SNX13-203ENST00000428135 NFXL1Q6ZNB6 911 aa11.94□□□□□ -0.5
SNX13-203ENST00000428135 WASHC4Q2M389 1173 aa11.94□□□□□ -0.5
SNX13-203ENST00000428135 PRXQ9BXM0 1461 aa11.94□□□□□ -0.5
SNX13-203ENST00000428135 TPM4P67936 248 aa11.94□□□□□ -0.5
SNX13-203ENST00000428135 C1orf115Q9H7X2 142 aa11.94□□□□□ -0.5
SNX13-203ENST00000428135 PRDM11Q9NQV5 511 aa11.94□□□□□ -0.5
SNX13-203ENST00000428135 TPD52L1Q16890 204 aaPredicted RBP11.93□□□□□ -0.5
SNX13-203ENST00000428135 SYAP1Q96A49 352 aaPredicted RBP11.93□□□□□ -0.5
SNX13-203ENST00000428135 ADAMTS8Q9UP79 889 aa11.93□□□□□ -0.5
SNX13-203ENST00000428135 PRKAR2BP31323 418 aa11.93□□□□□ -0.5
SNX13-203ENST00000428135 UBAP1LF5GYI3 381 aa11.93□□□□□ -0.5
SNX13-203ENST00000428135 EPRSP07814 1512 aaKnown RBP11.92□□□□□ -0.5
SNX13-203ENST00000428135 RRS1Q15050 365 aaKnown RBP11.92□□□□□ -0.5
SNX13-203ENST00000428135 HECW1Q76N89 1606 aa11.92□□□□□ -0.5
SNX13-203ENST00000428135 CENPQQ7L2Z9 268 aaPredicted RBP11.92□□□□□ -0.5
SNX13-203ENST00000428135 FOXO3O43524 673 aa11.91□□□□□ -0.5
SNX13-203ENST00000428135 MYL6BP14649 208 aa11.91□□□□□ -0.5
SNX13-203ENST00000428135 TSHZ2Q9NRE2 1034 aa11.91□□□□□ -0.5
SNX13-203ENST00000428135 CDCA7LQ96GN5 454 aa11.91□□□□□ -0.5
SNX13-203ENST00000428135 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
SNX13-203ENST00000428135 GNAI1P63096 354 aa11.91□□□□□ -0.5
SNX13-203ENST00000428135 CCDC34Q96HJ3 373 aa11.91□□□□□ -0.5
SNX13-203ENST00000428135 PDE4AP27815 886 aa11.9□□□□□ -0.5
SNX13-203ENST00000428135 SULT6B1Q6IMI4 303 aa11.9□□□□□ -0.5
SNX13-203ENST00000428135 IPO9Q96P70 1041 aaKnown RBP11.9□□□□□ -0.5
SNX13-203ENST00000428135 API5Q9BZZ5 524 aaKnown RBP11.9□□□□□ -0.5
SNX13-203ENST00000428135 SLC52A1Q9NWF4 448 aa11.9□□□□□ -0.5
SNX13-203ENST00000428135 CPLX1O14810 134 aa11.9□□□□□ -0.5
SNX13-203ENST00000428135 TSR2Q969E8 191 aaKnown RBP11.9□□□□□ -0.5
SNX13-203ENST00000428135 MIA2Q96PC5 1412 aa11.9□□□□□ -0.5
SNX13-203ENST00000428135 ERBINQ96RT1 1412 aa11.9□□□□□ -0.5
SNX13-203ENST00000428135 DNAJC2Q99543 621 aaKnown RBP11.9□□□□□ -0.5
SNX13-203ENST00000428135 PPP6R1Q9UPN7 881 aa11.9□□□□□ -0.5
SNX13-203ENST00000428135 ERICH3Q5RHP9 1530 aa11.9□□□□□ -0.5
SNX13-203ENST00000428135 CHMP4CQ96CF2 233 aa11.9□□□□□ -0.5
SNX13-203ENST00000428135 UBTFL1P0CB47 393 aaPredicted RBP11.9□□□□□ -0.51
SNX13-203ENST00000428135 TRDNQ13061 729 aa11.89□□□□□ -0.51
SNX13-203ENST00000428135 NGLY1Q96IV0 654 aa11.89□□□□□ -0.51
SNX13-203ENST00000428135 GOLGA6L3A6NEY3 463 aa11.89□□□□□ -0.51
SNX13-203ENST00000428135 BICDL1Q6ZP65 573 aa11.89□□□□□ -0.51
SNX13-203ENST00000428135 CCDC7Q96M83 1385 aa11.89□□□□□ -0.51
SNX13-203ENST00000428135 ASXL2Q76L83 1435 aa11.89□□□□□ -0.51
SNX13-203ENST00000428135 KIF21AQ7Z4S6 1674 aa11.89□□□□□ -0.51
SNX13-203ENST00000428135 TCP11L2Q8N4U5 519 aa11.89□□□□□ -0.51
SNX13-203ENST00000428135 TRIM29Q14134 588 aa11.88□□□□□ -0.51
SNX13-203ENST00000428135 SIL1Q9H173 461 aa11.88□□□□□ -0.51
SNX13-203ENST00000428135 IKQ13123 557 aaPredicted RBP11.88□□□□□ -0.51
SNX13-203ENST00000428135 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
SNX13-203ENST00000428135 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
SNX13-203ENST00000428135 KIF3AQ9Y496 699 aa11.88□□□□□ -0.51
SNX13-203ENST00000428135 ZKSCAN1P17029 563 aaPredicted RBP11.88□□□□□ -0.51
SNX13-203ENST00000428135 CABP4P57796 275 aa11.88□□□□□ -0.51
SNX13-203ENST00000428135 RUFY2Q8WXA3 655 aa11.88□□□□□ -0.51
SNX13-203ENST00000428135 CCDC85AQ96PX6 553 aaPredicted RBP11.88□□□□□ -0.51
SNX13-203ENST00000428135 FANCAO15360 1455 aa11.88□□□□□ -0.51
SNX13-203ENST00000428135 AMOTL2Q9Y2J4 779 aa11.88□□□□□ -0.51
SNX13-203ENST00000428135 VPS37CA5D8V6 355 aaPredicted RBP11.87□□□□□ -0.51
SNX13-203ENST00000428135 IDI1Q13907 227 aa11.87□□□□□ -0.51
SNX13-203ENST00000428135 KIF6Q6ZMV9 814 aa11.87□□□□□ -0.51
SNX13-203ENST00000428135 ZBED9Q6R2W3 1325 aa11.87□□□□□ -0.51
SNX13-203ENST00000428135 TATP17735 454 aaPredicted RBP11.87□□□□□ -0.51
SNX13-203ENST00000428135 SPINK5Q9NQ38 1064 aaPredicted RBP11.87□□□□□ -0.51
SNX13-203ENST00000428135 EFCAB5A4FU69 1503 aa11.87□□□□□ -0.51
SNX13-203ENST00000428135 DDX49Q9Y6V7 483 aaKnown RBP11.87□□□□□ -0.51
SNX13-203ENST00000428135 PLEKHO1Q53GL0 409 aaPredicted RBP11.86□□□□□ -0.51
SNX13-203ENST00000428135 DENND4BO75064 1496 aaPredicted RBP11.86□□□□□ -0.51
SNX13-203ENST00000428135 A0A0U1RQG5 324 aaPredicted RBP11.86□□□□□ -0.51
SNX13-203ENST00000428135 ERICH2A1L162 156 aa11.86□□□□□ -0.51
SNX13-203ENST00000428135 EXOSC9Q06265 439 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms