RNA–Protein interactions for RNA: ENST00000426910.1

CROCCP1-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 1, humanhuman

BASIC

Gene CROCCP1, Length 5,675 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP1-201ENST00000426910 TEFQ10587 303 aa20.59■□□□□ 0.89
CROCCP1-201ENST00000426910 INTS3Q68E01 1043 aaKnown RBP20.59■□□□□ 0.89
CROCCP1-201ENST00000426910 TOP2BQ02880 1626 aa20.59■□□□□ 0.89
CROCCP1-201ENST00000426910 C1orf115Q9H7X2 142 aa20.59■□□□□ 0.89
CROCCP1-201ENST00000426910 EHBP1L1Q8N3D4 1523 aa20.59■□□□□ 0.89
CROCCP1-201ENST00000426910 VPS37CA5D8V6 355 aaPredicted RBP20.59■□□□□ 0.89
CROCCP1-201ENST00000426910 TRAK2O60296 914 aa20.58■□□□□ 0.89
CROCCP1-201ENST00000426910 FKBP5Q13451 457 aaPredicted RBP20.58■□□□□ 0.89
CROCCP1-201ENST00000426910 TSR1Q2NL82 804 aaKnown RBP20.58■□□□□ 0.89
CROCCP1-201ENST00000426910 TTC5Q8N0Z6 440 aa20.58■□□□□ 0.89
CROCCP1-201ENST00000426910 RNF214Q8ND24 703 aa20.58■□□□□ 0.88
CROCCP1-201ENST00000426910 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.88
CROCCP1-201ENST00000426910 TCP11L2Q8N4U5 519 aa20.58■□□□□ 0.88
CROCCP1-201ENST00000426910 MTHFSP49914 203 aa20.57■□□□□ 0.88
CROCCP1-201ENST00000426910 BACH2Q9BYV9 841 aa20.57■□□□□ 0.88
CROCCP1-201ENST00000426910 SNAPC4Q5SXM2 1469 aa20.57■□□□□ 0.88
CROCCP1-201ENST00000426910 C9orf78Q9NZ63 289 aaPredicted RBP20.57■□□□□ 0.88
CROCCP1-201ENST00000426910 HECW1Q76N89 1606 aa20.57■□□□□ 0.88
CROCCP1-201ENST00000426910 ATF3P18847 181 aa20.57■□□□□ 0.88
CROCCP1-201ENST00000426910 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
CROCCP1-201ENST00000426910 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
CROCCP1-201ENST00000426910 R3HCC1Q9Y3T6 440 aaKnown RBP20.56■□□□□ 0.88
CROCCP1-201ENST00000426910 NASPP49321 788 aaPredicted RBP20.55■□□□□ 0.88
CROCCP1-201ENST00000426910 BICD2Q8TD16 824 aa20.55■□□□□ 0.88
CROCCP1-201ENST00000426910 PNISRQ8TF01 805 aaKnown RBP20.55■□□□□ 0.88
CROCCP1-201ENST00000426910 NOL10Q9BSC4 688 aaKnown RBP20.55■□□□□ 0.88
CROCCP1-201ENST00000426910 IFIT2P09913 472 aaKnown RBP20.54■□□□□ 0.88
CROCCP1-201ENST00000426910 ZNF771Q7L3S4 317 aaPredicted RBP20.54■□□□□ 0.88
CROCCP1-201ENST00000426910 CNKSR2Q8WXI2 1034 aa20.54■□□□□ 0.88
CROCCP1-201ENST00000426910 NUCB2P80303 420 aa20.54■□□□□ 0.88
CROCCP1-201ENST00000426910 SYNE3Q6ZMZ3 975 aa20.54■□□□□ 0.88
CROCCP1-201ENST00000426910 MRE11P49959 708 aa20.54■□□□□ 0.88
CROCCP1-201ENST00000426910 TSR2Q969E8 191 aaKnown RBP20.54■□□□□ 0.88
CROCCP1-201ENST00000426910 POLA1P09884 1462 aaPredicted RBP20.54■□□□□ 0.88
CROCCP1-201ENST00000426910 CDC45O75419 566 aa20.53■□□□□ 0.88
CROCCP1-201ENST00000426910 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.53■□□□□ 0.88
CROCCP1-201ENST00000426910 TPM2P07951 284 aa20.53■□□□□ 0.88
CROCCP1-201ENST00000426910 MEX3CQ5U5Q3 659 aaKnown RBP20.53■□□□□ 0.88
CROCCP1-201ENST00000426910 AMOTL1Q8IY63 956 aa20.53■□□□□ 0.88
CROCCP1-201ENST00000426910 ZKSCAN1P17029 563 aaPredicted RBP20.53■□□□□ 0.88
CROCCP1-201ENST00000426910 EXOSC9Q06265 439 aaKnown RBP20.53■□□□□ 0.88
CROCCP1-201ENST00000426910 CAVIN1Q6NZI2 390 aaKnown RBP20.53■□□□□ 0.88
CROCCP1-201ENST00000426910 TSPYL4Q9UJ04 414 aa20.52■□□□□ 0.88
CROCCP1-201ENST00000426910 SMC3Q9UQE7 1217 aa20.52■□□□□ 0.88
CROCCP1-201ENST00000426910 SMG6Q86US8 1419 aaKnown RBP20.52■□□□□ 0.88
CROCCP1-201ENST00000426910 DHX16O60231 1041 aaKnown RBP20.52■□□□□ 0.88
CROCCP1-201ENST00000426910 GNAI1P63096 354 aa20.51■□□□□ 0.87
CROCCP1-201ENST00000426910 CFAP70Q5T0N1 1121 aa20.51■□□□□ 0.87
CROCCP1-201ENST00000426910 RUFY2Q8WXA3 655 aa20.51■□□□□ 0.87
CROCCP1-201ENST00000426910 NEXNQ0ZGT2 675 aa20.51■□□□□ 0.87
CROCCP1-201ENST00000426910 SYTL4Q96C24 671 aaPredicted RBP20.51■□□□□ 0.87
CROCCP1-201ENST00000426910 PATL2C9JE40 543 aaKnown RBP20.51■□□□□ 0.87
CROCCP1-201ENST00000426910 KLHL34Q8N239 644 aa20.51■□□□□ 0.87
CROCCP1-201ENST00000426910 PCMTD1Q96MG8 357 aaPredicted RBP20.5■□□□□ 0.87
CROCCP1-201ENST00000426910 ROCK1Q13464 1354 aa20.5■□□□□ 0.87
CROCCP1-201ENST00000426910 CCDC27Q2M243 656 aa20.49■□□□□ 0.87
CROCCP1-201ENST00000426910 NOB1Q9ULX3 412 aaKnown RBP20.49■□□□□ 0.87
CROCCP1-201ENST00000426910 APPP05067 770 aa20.48■□□□□ 0.87
CROCCP1-201ENST00000426910 TPM1P09493 284 aa20.48■□□□□ 0.87
CROCCP1-201ENST00000426910 CWC22Q9HCG8 908 aaKnown RBP20.47■□□□□ 0.87
CROCCP1-201ENST00000426910 SAMD1Q6SPF0 538 aaPredicted RBP20.47■□□□□ 0.87
CROCCP1-201ENST00000426910 VPS37DQ86XT2 251 aa20.47■□□□□ 0.87
CROCCP1-201ENST00000426910 AFAP1Q8N556 730 aa20.47■□□□□ 0.87
CROCCP1-201ENST00000426910 PRPF40AO75400 957 aaKnown RBP20.46■□□□□ 0.87
CROCCP1-201ENST00000426910 TROQ12816 1431 aaPredicted RBP20.46■□□□□ 0.87
CROCCP1-201ENST00000426910 IFT57Q9NWB7 429 aa20.46■□□□□ 0.87
CROCCP1-201ENST00000426910 HFM1A2PYH4 1435 aa20.45■□□□□ 0.86
CROCCP1-201ENST00000426910 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
CROCCP1-201ENST00000426910 C9orf84Q5VXU9 1444 aa20.45■□□□□ 0.86
CROCCP1-201ENST00000426910 DDX58O95786 925 aaKnown RBP20.45■□□□□ 0.86
CROCCP1-201ENST00000426910 TRIM29Q14134 588 aa20.45■□□□□ 0.86
CROCCP1-201ENST00000426910 NUTM2GQ5VZR2 741 aa20.45■□□□□ 0.86
CROCCP1-201ENST00000426910 LRRFIP1Q32MZ4 808 aaKnown RBP20.44■□□□□ 0.86
CROCCP1-201ENST00000426910 TIAM1Q13009 1591 aa20.44■□□□□ 0.86
CROCCP1-201ENST00000426910 HOMER1Q86YM7 354 aa20.44■□□□□ 0.86
CROCCP1-201ENST00000426910 RBM10P98175 930 aaKnown RBP20.43■□□□□ 0.86
CROCCP1-201ENST00000426910 SASS6Q6UVJ0 657 aa20.43■□□□□ 0.86
CROCCP1-201ENST00000426910 CHMP4CQ96CF2 233 aa20.43■□□□□ 0.86
CROCCP1-201ENST00000426910 G3BP1Q13283 466 aaKnown RBP eCLIP20.43■□□□□ 0.86
CROCCP1-201ENST00000426910 CPLX2Q6PUV4 134 aaKnown RBP20.42■□□□□ 0.86
CROCCP1-201ENST00000426910 MPNDQ8N594 471 aa20.42■□□□□ 0.86
CROCCP1-201ENST00000426910 PRXQ9BXM0 1461 aa20.42■□□□□ 0.86
CROCCP1-201ENST00000426910 GPRASP1Q5JY77 1395 aa20.42■□□□□ 0.86
CROCCP1-201ENST00000426910 RAPGEF4Q8WZA2 1011 aa20.42■□□□□ 0.86
CROCCP1-201ENST00000426910 PRKAR2BP31323 418 aa20.42■□□□□ 0.86
CROCCP1-201ENST00000426910 C11orf95C9JLR9 678 aaPredicted RBP20.41■□□□□ 0.86
CROCCP1-201ENST00000426910 KDM4AO75164 1064 aa20.41■□□□□ 0.86
CROCCP1-201ENST00000426910 AIMP1Q12904 312 aaKnown RBP20.41■□□□□ 0.86
CROCCP1-201ENST00000426910 CCDC70Q6NSX1 233 aa20.41■□□□□ 0.86
CROCCP1-201ENST00000426910 AAMPQ13685 434 aa20.41■□□□□ 0.86
CROCCP1-201ENST00000426910 NEK4P51957 841 aa20.41■□□□□ 0.86
CROCCP1-201ENST00000426910 CCDC39Q9UFE4 941 aa20.41■□□□□ 0.86
CROCCP1-201ENST00000426910 KIAA1107Q9UPP5 1409 aa20.41■□□□□ 0.86
CROCCP1-201ENST00000426910 CPLX1O14810 134 aa20.4■□□□□ 0.86
CROCCP1-201ENST00000426910 SETQ01105 290 aaPredicted RBP20.4■□□□□ 0.86
CROCCP1-201ENST00000426910 SLC12A5Q9H2X9 1139 aa20.4■□□□□ 0.86
CROCCP1-201ENST00000426910 POGZQ7Z3K3 1410 aa20.4■□□□□ 0.86
CROCCP1-201ENST00000426910 PDE3AQ14432 1141 aa20.4■□□□□ 0.86
CROCCP1-201ENST00000426910 CCDC43Q96MW1 224 aaKnown RBP20.4■□□□□ 0.86
CROCCP1-201ENST00000426910 RNF20Q5VTR2 975 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms