RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 FAM135BQ49AJ0 1406 aa20.68■□□□□ 0.9
ACTB-204ENST00000425660 NINLQ9Y2I6 1382 aa20.67■□□□□ 0.9
ACTB-204ENST00000425660 CPS1P31327 1500 aa20.67■□□□□ 0.9
ACTB-204ENST00000425660 ZNF142P52746 1687 aaPredicted RBP20.67■□□□□ 0.9
ACTB-204ENST00000425660 CNGB1Q14028 1251 aaPredicted RBP20.67■□□□□ 0.9
ACTB-204ENST00000425660 NLRP13Q86W25 1043 aa20.67■□□□□ 0.9
ACTB-204ENST00000425660 SAFB2Q14151 953 aaKnown RBP eCLIP20.66■□□□□ 0.9
ACTB-204ENST00000425660 CC2D1BQ5T0F9 858 aaKnown RBP20.66■□□□□ 0.9
ACTB-204ENST00000425660 CARD14Q9BXL6 1004 aa20.65■□□□□ 0.9
ACTB-204ENST00000425660 ATAD2Q6PL18 1390 aa20.64■□□□□ 0.89
ACTB-204ENST00000425660 SLC12A5Q9H2X9 1139 aa20.64■□□□□ 0.89
ACTB-204ENST00000425660 DIP2AQ14689 1571 aa20.64■□□□□ 0.89
ACTB-204ENST00000425660 PLEKHH1Q9ULM0 1364 aa20.63■□□□□ 0.89
ACTB-204ENST00000425660 MINK1Q8N4C8 1332 aaPredicted RBP20.63■□□□□ 0.89
ACTB-204ENST00000425660 TMC1Q8TDI8 760 aa20.62■□□□□ 0.89
ACTB-204ENST00000425660 BCANQ96GW7 911 aa20.62■□□□□ 0.89
ACTB-204ENST00000425660 CABP2Q9NPB3 220 aa20.62■□□□□ 0.89
ACTB-204ENST00000425660 TBX22Q9Y458 520 aa20.62■□□□□ 0.89
ACTB-204ENST00000425660 SETD1BQ9UPS6 1966 aaKnown RBP20.62■□□□□ 0.89
ACTB-204ENST00000425660 ANKRD36BQ8N2N9 1353 aa20.62■□□□□ 0.89
ACTB-204ENST00000425660 WAPLQ7Z5K2 1190 aa20.62■□□□□ 0.89
ACTB-204ENST00000425660 PNISRQ8TF01 805 aaKnown RBP20.62■□□□□ 0.89
ACTB-204ENST00000425660 FAM9BQ8IZU0 186 aa20.6■□□□□ 0.89
ACTB-204ENST00000425660 USP32Q8NFA0 1604 aa20.6■□□□□ 0.89
ACTB-204ENST00000425660 SRPK2P78362 688 aaKnown RBP20.6■□□□□ 0.89
ACTB-204ENST00000425660 NSD3Q9BZ95 1437 aa20.58■□□□□ 0.88
ACTB-204ENST00000425660 ROBO2Q9HCK4 1378 aa20.57■□□□□ 0.88
ACTB-204ENST00000425660 CDK19Q9BWU1 502 aa20.57■□□□□ 0.88
ACTB-204ENST00000425660 PTPRUQ92729 1446 aa20.57■□□□□ 0.88
ACTB-204ENST00000425660 HNRNPUQ00839 825 aaKnown RBP eCLIP20.57■□□□□ 0.88
ACTB-204ENST00000425660 SLC26A8Q96RN1 970 aa20.57■□□□□ 0.88
ACTB-204ENST00000425660 PIK3R4Q99570 1358 aa20.55■□□□□ 0.88
ACTB-204ENST00000425660 PTCH1Q13635 1447 aa20.55■□□□□ 0.88
ACTB-204ENST00000425660 ADGRB2O60241 1585 aa20.54■□□□□ 0.88
ACTB-204ENST00000425660 PPP2R1AP30153 589 aa20.54■□□□□ 0.88
ACTB-204ENST00000425660 CD163L1Q9NR16 1453 aa20.54■□□□□ 0.88
ACTB-204ENST00000425660 WASLO00401 505 aaPredicted RBP20.53■□□□□ 0.88
ACTB-204ENST00000425660 A0A1W2PP64 1363 aa20.53■□□□□ 0.88
ACTB-204ENST00000425660 ANKLE2Q86XL3 938 aa20.53■□□□□ 0.88
ACTB-204ENST00000425660 CGNL1Q0VF96 1302 aa20.52■□□□□ 0.88
ACTB-204ENST00000425660 NSD2O96028 1365 aa20.52■□□□□ 0.87
ACTB-204ENST00000425660 INSRP06213 1382 aa20.52■□□□□ 0.87
ACTB-204ENST00000425660 TERF2IPQ9NYB0 399 aa20.5■□□□□ 0.87
ACTB-204ENST00000425660 AMOTL2Q9Y2J4 779 aa20.5■□□□□ 0.87
ACTB-204ENST00000425660 XRN1Q8IZH2 1706 aaKnown RBP20.5■□□□□ 0.87
ACTB-204ENST00000425660 ZBED9Q6R2W3 1325 aa20.5■□□□□ 0.87
ACTB-204ENST00000425660 ATP7BP35670 1465 aa20.5■□□□□ 0.87
ACTB-204ENST00000425660 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
ACTB-204ENST00000425660 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.48■□□□□ 0.87
ACTB-204ENST00000425660 CABP1Q9NZU7 370 aa20.47■□□□□ 0.87
ACTB-204ENST00000425660 HDGFL2Q7Z4V5 671 aaPredicted RBP20.45■□□□□ 0.86
ACTB-204ENST00000425660 GTF3C3Q9Y5Q9 886 aa20.45■□□□□ 0.86
ACTB-204ENST00000425660 CPSF1Q10570 1443 aaKnown RBP20.44■□□□□ 0.86
ACTB-204ENST00000425660 CCDC61Q9Y6R9 512 aa20.43■□□□□ 0.86
ACTB-204ENST00000425660 PPIP5K1Q6PFW1 1433 aa20.43■□□□□ 0.86
ACTB-204ENST00000425660 HSPA2P54652 639 aa20.43■□□□□ 0.86
ACTB-204ENST00000425660 NUDT16Q96DE0 195 aaKnown RBP20.43■□□□□ 0.86
ACTB-204ENST00000425660 MORC1Q86VD1 984 aa20.42■□□□□ 0.86
ACTB-204ENST00000425660 NPHP4O75161 1426 aaPredicted RBP20.42■□□□□ 0.86
ACTB-204ENST00000425660 BLMP54132 1417 aaPredicted RBP20.41■□□□□ 0.86
ACTB-204ENST00000425660 KCNA6P17658 529 aa20.4■□□□□ 0.86
ACTB-204ENST00000425660 POLR3AO14802 1390 aaPredicted RBP20.4■□□□□ 0.86
ACTB-204ENST00000425660 CDC42BPGQ6DT37 1551 aa20.4■□□□□ 0.86
ACTB-204ENST00000425660 PRR36Q9H6K5 1346 aa20.4■□□□□ 0.86
ACTB-204ENST00000425660 CHD2O14647 1828 aaKnown RBP20.39■□□□□ 0.85
ACTB-204ENST00000425660 FYB1O15117 783 aa20.39■□□□□ 0.85
ACTB-204ENST00000425660 TOPAZ1Q8N9V7 1692 aa20.38■□□□□ 0.85
ACTB-204ENST00000425660 EDC4Q6P2E9 1401 aaKnown RBP20.37■□□□□ 0.85
ACTB-204ENST00000425660 ANKRD26Q9UPS8 1709 aa20.37■□□□□ 0.85
ACTB-204ENST00000425660 PLEKHG3A1L390 1219 aa20.34■□□□□ 0.85
ACTB-204ENST00000425660 ZNF692Q9BU19 519 aaPredicted RBP20.34■□□□□ 0.85
ACTB-204ENST00000425660 ADAMTS8Q9UP79 889 aa20.34■□□□□ 0.85
ACTB-204ENST00000425660 MON2Q7Z3U7 1717 aa20.34■□□□□ 0.85
ACTB-204ENST00000425660 NCKAP5LQ9HCH0 1330 aa20.34■□□□□ 0.85
ACTB-204ENST00000425660 WDR43Q15061 677 aaKnown RBP eCLIP20.33■□□□□ 0.85
ACTB-204ENST00000425660 AKAP12Q02952 1782 aa20.32■□□□□ 0.84
ACTB-204ENST00000425660 GGNBP2Q9H3C7 697 aa20.32■□□□□ 0.84
ACTB-204ENST00000425660 LMTK3Q96Q04 1460 aa20.32■□□□□ 0.84
ACTB-204ENST00000425660 KIF20BQ96Q89 1820 aa20.32■□□□□ 0.84
ACTB-204ENST00000425660 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
ACTB-204ENST00000425660 ANKARQ7Z5J8 1434 aa20.31■□□□□ 0.84
ACTB-204ENST00000425660 NKTRP30414 1462 aaKnown RBP20.3■□□□□ 0.84
ACTB-204ENST00000425660 TNNT2P45379 298 aaPredicted RBP20.3■□□□□ 0.84
ACTB-204ENST00000425660 MTHFSP49914 203 aa20.3■□□□□ 0.84
ACTB-204ENST00000425660 ITSN1Q15811 1721 aa20.29■□□□□ 0.84
ACTB-204ENST00000425660 NRKQ7Z2Y5 1582 aa20.28■□□□□ 0.84
ACTB-204ENST00000425660 AEBP2Q6ZN18 517 aaPredicted RBP20.27■□□□□ 0.84
ACTB-204ENST00000425660 SHPRHQ149N8 1683 aa20.27■□□□□ 0.84
ACTB-204ENST00000425660 ACEP12821 1306 aa20.27■□□□□ 0.84
ACTB-204ENST00000425660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.27■□□□□ 0.84
ACTB-204ENST00000425660 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.83
ACTB-204ENST00000425660 FMN2Q9NZ56 1722 aa20.26■□□□□ 0.83
ACTB-204ENST00000425660 USP6P35125 1406 aa20.26■□□□□ 0.83
ACTB-204ENST00000425660 NALCNQ8IZF0 1738 aa20.26■□□□□ 0.83
ACTB-204ENST00000425660 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
ACTB-204ENST00000425660 SSH2Q76I76 1423 aa20.25■□□□□ 0.83
ACTB-204ENST00000425660 ADGRL3Q9HAR2 1447 aa20.25■□□□□ 0.83
ACTB-204ENST00000425660 PNPLA6Q8IY17 1366 aa20.24■□□□□ 0.83
ACTB-204ENST00000425660 NUTM2FA1L443 756 aa20.23■□□□□ 0.83
ACTB-204ENST00000425660 PDE3BQ13370 1112 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms