RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 MORC1Q86VD1 984 aa18.24■□□□□ 0.51
CDCA3-202ENST00000422785 CCDC136Q96JN2 1154 aa18.24■□□□□ 0.51
CDCA3-202ENST00000422785 STAG3Q9UJ98 1225 aa18.24■□□□□ 0.51
CDCA3-202ENST00000422785 YTHDC2Q9H6S0 1430 aaKnown RBP18.24■□□□□ 0.51
CDCA3-202ENST00000422785 ALKQ9UM73 1620 aa18.23■□□□□ 0.51
CDCA3-202ENST00000422785 CGNL1Q0VF96 1302 aa18.23■□□□□ 0.51
CDCA3-202ENST00000422785 STK26Q9P289 416 aa18.23■□□□□ 0.51
CDCA3-202ENST00000422785 NINLQ9Y2I6 1382 aa18.22■□□□□ 0.51
CDCA3-202ENST00000422785 A2ML1A8K2U0 1454 aa18.22■□□□□ 0.51
CDCA3-202ENST00000422785 CABP2Q9NPB3 220 aa18.21■□□□□ 0.51
CDCA3-202ENST00000422785 NSD2O96028 1365 aa18.2■□□□□ 0.5
CDCA3-202ENST00000422785 SAFB2Q14151 953 aaKnown RBP eCLIP18.2■□□□□ 0.5
CDCA3-202ENST00000422785 GOLGA2Q08379 1002 aa18.2■□□□□ 0.5
CDCA3-202ENST00000422785 MLECQ14165 292 aa18.2■□□□□ 0.5
CDCA3-202ENST00000422785 NGEFQ8N5V2 710 aa18.19■□□□□ 0.5
CDCA3-202ENST00000422785 CCDC146Q8IYE0 955 aa18.19■□□□□ 0.5
CDCA3-202ENST00000422785 DUSP27Q5VZP5 1158 aa18.19■□□□□ 0.5
CDCA3-202ENST00000422785 PRAM1Q96QH2 718 aa18.19■□□□□ 0.5
CDCA3-202ENST00000422785 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
CDCA3-202ENST00000422785 POGKQ9P215 609 aa18.18■□□□□ 0.5
CDCA3-202ENST00000422785 APAF1O14727 1248 aa18.17■□□□□ 0.5
CDCA3-202ENST00000422785 EXOC6Q8TAG9 804 aa18.17■□□□□ 0.5
CDCA3-202ENST00000422785 ATAD2Q6PL18 1390 aa18.17■□□□□ 0.5
CDCA3-202ENST00000422785 RIMS2Q9UQ26 1411 aa18.17■□□□□ 0.5
CDCA3-202ENST00000422785 PRKCSHP14314 528 aaPredicted RBP18.17■□□□□ 0.5
CDCA3-202ENST00000422785 SRPK2P78362 688 aaKnown RBP18.17■□□□□ 0.5
CDCA3-202ENST00000422785 SHPRHQ149N8 1683 aa18.17■□□□□ 0.5
CDCA3-202ENST00000422785 SLFN5Q08AF3 891 aa18.16■□□□□ 0.5
CDCA3-202ENST00000422785 MINK1Q8N4C8 1332 aaPredicted RBP18.15■□□□□ 0.5
CDCA3-202ENST00000422785 TNNT2P45379 298 aaPredicted RBP18.15■□□□□ 0.5
CDCA3-202ENST00000422785 TRMT2AQ8IZ69 625 aaKnown RBP18.15■□□□□ 0.5
CDCA3-202ENST00000422785 ZMYM3Q14202 1370 aa18.15■□□□□ 0.5
CDCA3-202ENST00000422785 DLC1Q96QB1 1528 aa18.14■□□□□ 0.49
CDCA3-202ENST00000422785 A0A1W2PP64 1363 aa18.14■□□□□ 0.49
CDCA3-202ENST00000422785 ABCC11Q96J66 1382 aa18.14■□□□□ 0.49
CDCA3-202ENST00000422785 ESF1Q9H501 851 aaKnown RBP18.14■□□□□ 0.49
CDCA3-202ENST00000422785 SETD1AO15047 1707 aaKnown RBP18.13■□□□□ 0.49
CDCA3-202ENST00000422785 MTHFSP49914 203 aa18.12■□□□□ 0.49
CDCA3-202ENST00000422785 CFAP53Q96M91 514 aa18.12■□□□□ 0.49
CDCA3-202ENST00000422785 TERF2IPQ9NYB0 399 aa18.12■□□□□ 0.49
CDCA3-202ENST00000422785 PLIN1O60240 522 aa18.11■□□□□ 0.49
CDCA3-202ENST00000422785 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.11■□□□□ 0.49
CDCA3-202ENST00000422785 CD163L1Q9NR16 1453 aa18.1■□□□□ 0.49
CDCA3-202ENST00000422785 E9PSI1 815 aa18.1■□□□□ 0.49
CDCA3-202ENST00000422785 CDK19Q9BWU1 502 aa18.09■□□□□ 0.49
CDCA3-202ENST00000422785 RUNDC1Q96C34 613 aa18.08■□□□□ 0.49
CDCA3-202ENST00000422785 NKTRP30414 1462 aaKnown RBP18.08■□□□□ 0.49
CDCA3-202ENST00000422785 NRXN3Q9Y4C0 1643 aa18.08■□□□□ 0.48
CDCA3-202ENST00000422785 MED14O60244 1454 aa18.08■□□□□ 0.48
CDCA3-202ENST00000422785 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.48
CDCA3-202ENST00000422785 FANCIQ9NVI1 1328 aa18.07■□□□□ 0.48
CDCA3-202ENST00000422785 ANKRD26Q9UPS8 1709 aa18.06■□□□□ 0.48
CDCA3-202ENST00000422785 CRBNQ96SW2 442 aa18.06■□□□□ 0.48
CDCA3-202ENST00000422785 TNRQ92752 1358 aa18.06■□□□□ 0.48
CDCA3-202ENST00000422785 IQSEC2Q5JU85 1478 aa18.06■□□□□ 0.48
CDCA3-202ENST00000422785 HDGFP51858 240 aaKnown RBP18.06■□□□□ 0.48
CDCA3-202ENST00000422785 HDGFL2Q7Z4V5 671 aaPredicted RBP18.06■□□□□ 0.48
CDCA3-202ENST00000422785 WWC1Q8IX03 1113 aa18.06■□□□□ 0.48
CDCA3-202ENST00000422785 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.05■□□□□ 0.48
CDCA3-202ENST00000422785 NLRP1Q9C000 1473 aa18.05■□□□□ 0.48
CDCA3-202ENST00000422785 FYB1O15117 783 aa18.04■□□□□ 0.48
CDCA3-202ENST00000422785 WAPLQ7Z5K2 1190 aa18.04■□□□□ 0.48
CDCA3-202ENST00000422785 GGNBP2Q9H3C7 697 aa18.04■□□□□ 0.48
CDCA3-202ENST00000422785 CABP1Q9NZU7 370 aa18.03■□□□□ 0.48
CDCA3-202ENST00000422785 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
CDCA3-202ENST00000422785 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
CDCA3-202ENST00000422785 TCP11L2Q8N4U5 519 aa18.03■□□□□ 0.48
CDCA3-202ENST00000422785 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
CDCA3-202ENST00000422785 C20orf194Q5TEA3 1177 aa18.02■□□□□ 0.48
CDCA3-202ENST00000422785 METP08581 1390 aa18.02■□□□□ 0.48
CDCA3-202ENST00000422785 ATP7BP35670 1465 aa18.01■□□□□ 0.47
CDCA3-202ENST00000422785 CCDC27Q2M243 656 aa18.01■□□□□ 0.47
CDCA3-202ENST00000422785 SIRT1Q96EB6 747 aa18.01■□□□□ 0.47
CDCA3-202ENST00000422785 UBR1Q8IWV7 1749 aa18.01■□□□□ 0.47
CDCA3-202ENST00000422785 TMEM2Q9UHN6 1383 aa18■□□□□ 0.47
CDCA3-202ENST00000422785 KNDC1Q76NI1 1749 aa18■□□□□ 0.47
CDCA3-202ENST00000422785 KIF20BQ96Q89 1820 aa17.99■□□□□ 0.47
CDCA3-202ENST00000422785 TECPR2O15040 1411 aa17.99■□□□□ 0.47
CDCA3-202ENST00000422785 U2AF1L5P0DN76 240 aaPredicted RBP17.99■□□□□ 0.47
CDCA3-202ENST00000422785 U2AF1Q01081 240 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDCA3-202ENST00000422785 WDR63Q8IWG1 891 aa17.99■□□□□ 0.47
CDCA3-202ENST00000422785 COL3A1P02461 1466 aaPredicted RBP17.99■□□□□ 0.47
CDCA3-202ENST00000422785 FAM135BQ49AJ0 1406 aa17.99■□□□□ 0.47
CDCA3-202ENST00000422785 NEUROD2Q15784 382 aa17.98■□□□□ 0.47
CDCA3-202ENST00000422785 RRP7AQ9Y3A4 280 aaKnown RBP17.98■□□□□ 0.47
CDCA3-202ENST00000422785 WASLO00401 505 aaPredicted RBP17.97■□□□□ 0.47
CDCA3-202ENST00000422785 ADGRB2O60241 1585 aa17.97■□□□□ 0.47
CDCA3-202ENST00000422785 CPS1P31327 1500 aa17.96■□□□□ 0.47
CDCA3-202ENST00000422785 TXNDC2Q86VQ3 553 aa17.96■□□□□ 0.46
CDCA3-202ENST00000422785 TCERG1O14776 1098 aaKnown RBP17.95■□□□□ 0.46
CDCA3-202ENST00000422785 PNPLA6Q8IY17 1366 aa17.95■□□□□ 0.46
CDCA3-202ENST00000422785 BCAR3O75815 825 aa17.94■□□□□ 0.46
CDCA3-202ENST00000422785 CPSF1Q10570 1443 aaKnown RBP17.94■□□□□ 0.46
CDCA3-202ENST00000422785 ANP32EQ9BTT0 268 aa17.94■□□□□ 0.46
CDCA3-202ENST00000422785 PLEKHF1Q96S99 279 aa17.93■□□□□ 0.46
CDCA3-202ENST00000422785 PPIP5K1Q6PFW1 1433 aa17.93■□□□□ 0.46
CDCA3-202ENST00000422785 MSH5O43196 834 aa17.92■□□□□ 0.46
CDCA3-202ENST00000422785 ADAMTS13Q76LX8 1427 aa17.92■□□□□ 0.46
CDCA3-202ENST00000422785 U2SURPO15042 1029 aaKnown RBP17.92■□□□□ 0.46
CDCA3-202ENST00000422785 EDC4Q6P2E9 1401 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms