RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 TMC1Q8TDI8 760 aa19.63■□□□□ 0.73
SEMA4D-204ENST00000420101 RIMS1Q86UR5 1692 aaKnown RBP19.63■□□□□ 0.73
SEMA4D-204ENST00000420101 CCDC184Q52MB2 194 aa19.62■□□□□ 0.73
SEMA4D-204ENST00000420101 ZBTB47Q9UFB7 747 aaPredicted RBP19.62■□□□□ 0.73
SEMA4D-204ENST00000420101 PER1O15534 1290 aaPredicted RBP19.62■□□□□ 0.73
SEMA4D-204ENST00000420101 RNF123Q5XPI4 1314 aa19.62■□□□□ 0.73
SEMA4D-204ENST00000420101 FAM9BQ8IZU0 186 aa19.61■□□□□ 0.73
SEMA4D-204ENST00000420101 MINK1Q8N4C8 1332 aaPredicted RBP19.6■□□□□ 0.73
SEMA4D-204ENST00000420101 ARHGEF28Q8N1W1 1705 aaKnown RBP19.6■□□□□ 0.73
SEMA4D-204ENST00000420101 LTKP29376 864 aa19.59■□□□□ 0.73
SEMA4D-204ENST00000420101 SRPK2P78362 688 aaKnown RBP19.59■□□□□ 0.73
SEMA4D-204ENST00000420101 B4GALNT3Q6L9W6 998 aa19.59■□□□□ 0.73
SEMA4D-204ENST00000420101 MYBBP1AQ9BQG0 1328 aaKnown RBP19.58■□□□□ 0.73
SEMA4D-204ENST00000420101 PTPRMP28827 1452 aa19.58■□□□□ 0.72
SEMA4D-204ENST00000420101 LRPPRCP42704 1394 aaKnown RBP19.58■□□□□ 0.72
SEMA4D-204ENST00000420101 CABP2Q9NPB3 220 aa19.57■□□□□ 0.72
SEMA4D-204ENST00000420101 METP08581 1390 aa19.56■□□□□ 0.72
SEMA4D-204ENST00000420101 WAPLQ7Z5K2 1190 aa19.55■□□□□ 0.72
SEMA4D-204ENST00000420101 PLEKHG1Q9ULL1 1385 aa19.55■□□□□ 0.72
SEMA4D-204ENST00000420101 PAK3O75914 559 aaPredicted RBP19.55■□□□□ 0.72
SEMA4D-204ENST00000420101 NBR1Q14596 966 aa19.55■□□□□ 0.72
SEMA4D-204ENST00000420101 SLC26A8Q96RN1 970 aa19.54■□□□□ 0.72
SEMA4D-204ENST00000420101 SLC12A5Q9H2X9 1139 aa19.54■□□□□ 0.72
SEMA4D-204ENST00000420101 ABCC11Q96J66 1382 aa19.53■□□□□ 0.72
SEMA4D-204ENST00000420101 ADAMTSL3P82987 1691 aa19.53■□□□□ 0.72
SEMA4D-204ENST00000420101 PARD3Q8TEW0 1356 aa19.53■□□□□ 0.72
SEMA4D-204ENST00000420101 NRXN3Q9Y4C0 1643 aa19.53■□□□□ 0.72
SEMA4D-204ENST00000420101 MYOM1P52179 1685 aa19.52■□□□□ 0.72
SEMA4D-204ENST00000420101 PUS7Q96PZ0 661 aaKnown RBP19.52■□□□□ 0.72
SEMA4D-204ENST00000420101 TULP4Q9NRJ4 1543 aa19.51■□□□□ 0.71
SEMA4D-204ENST00000420101 NLRP13Q86W25 1043 aa19.51■□□□□ 0.71
SEMA4D-204ENST00000420101 SLIT1O75093 1534 aa19.5■□□□□ 0.71
SEMA4D-204ENST00000420101 CDK19Q9BWU1 502 aa19.5■□□□□ 0.71
SEMA4D-204ENST00000420101 DLC1Q96QB1 1528 aa19.5■□□□□ 0.71
SEMA4D-204ENST00000420101 CEP170BQ9Y4F5 1589 aaPredicted RBP19.49■□□□□ 0.71
SEMA4D-204ENST00000420101 ARHGAP23Q9P227 1491 aa19.49■□□□□ 0.71
SEMA4D-204ENST00000420101 SETD1AO15047 1707 aaKnown RBP19.49■□□□□ 0.71
SEMA4D-204ENST00000420101 BRD4O60885 1362 aaPredicted RBP19.49■□□□□ 0.71
SEMA4D-204ENST00000420101 PLEKHH1Q9ULM0 1364 aa19.49■□□□□ 0.71
SEMA4D-204ENST00000420101 AMER1Q5JTC6 1135 aaPredicted RBP19.49■□□□□ 0.71
SEMA4D-204ENST00000420101 NUDCQ9Y266 331 aa19.49■□□□□ 0.71
SEMA4D-204ENST00000420101 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
SEMA4D-204ENST00000420101 ADAMTS13Q76LX8 1427 aa19.48■□□□□ 0.71
SEMA4D-204ENST00000420101 PPM1GO15355 546 aaPredicted RBP19.48■□□□□ 0.71
SEMA4D-204ENST00000420101 CARD14Q9BXL6 1004 aa19.48■□□□□ 0.71
SEMA4D-204ENST00000420101 ANO8Q9HCE9 1232 aaPredicted RBP19.48■□□□□ 0.71
SEMA4D-204ENST00000420101 ATAD2Q6PL18 1390 aa19.47■□□□□ 0.71
SEMA4D-204ENST00000420101 ANKLE2Q86XL3 938 aa19.46■□□□□ 0.71
SEMA4D-204ENST00000420101 NSD3Q9BZ95 1437 aa19.46■□□□□ 0.71
SEMA4D-204ENST00000420101 TBX22Q9Y458 520 aa19.45■□□□□ 0.7
SEMA4D-204ENST00000420101 SIRT1Q96EB6 747 aa19.44■□□□□ 0.7
SEMA4D-204ENST00000420101 TCERG1O14776 1098 aaKnown RBP19.44■□□□□ 0.7
SEMA4D-204ENST00000420101 AMOTL2Q9Y2J4 779 aa19.43■□□□□ 0.7
SEMA4D-204ENST00000420101 NINLQ9Y2I6 1382 aa19.43■□□□□ 0.7
SEMA4D-204ENST00000420101 FAM135BQ49AJ0 1406 aa19.43■□□□□ 0.7
SEMA4D-204ENST00000420101 PNISRQ8TF01 805 aaKnown RBP19.42■□□□□ 0.7
SEMA4D-204ENST00000420101 TERF2IPQ9NYB0 399 aa19.42■□□□□ 0.7
SEMA4D-204ENST00000420101 ANKRD36BQ8N2N9 1353 aa19.42■□□□□ 0.7
SEMA4D-204ENST00000420101 NPC1L1Q9UHC9 1359 aa19.42■□□□□ 0.7
SEMA4D-204ENST00000420101 MS4A1P11836 297 aa19.41■□□□□ 0.7
SEMA4D-204ENST00000420101 TECPR2O15040 1411 aa19.41■□□□□ 0.7
SEMA4D-204ENST00000420101 WASLO00401 505 aaPredicted RBP19.41■□□□□ 0.7
SEMA4D-204ENST00000420101 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
SEMA4D-204ENST00000420101 HDGFL2Q7Z4V5 671 aaPredicted RBP19.41■□□□□ 0.7
SEMA4D-204ENST00000420101 ROBO2Q9HCK4 1378 aa19.4■□□□□ 0.7
SEMA4D-204ENST00000420101 CGNL1Q0VF96 1302 aa19.4■□□□□ 0.7
SEMA4D-204ENST00000420101 MORC1Q86VD1 984 aa19.4■□□□□ 0.7
SEMA4D-204ENST00000420101 CABP1Q9NZU7 370 aa19.39■□□□□ 0.7
SEMA4D-204ENST00000420101 CPS1P31327 1500 aa19.39■□□□□ 0.69
SEMA4D-204ENST00000420101 MED14O60244 1454 aa19.39■□□□□ 0.69
SEMA4D-204ENST00000420101 KNDC1Q76NI1 1749 aa19.38■□□□□ 0.69
SEMA4D-204ENST00000420101 UBE2Q2Q8WVN8 375 aa19.38■□□□□ 0.69
SEMA4D-204ENST00000420101 SALL2Q9Y467 1007 aaPredicted RBP19.37■□□□□ 0.69
SEMA4D-204ENST00000420101 PTPRUQ92729 1446 aa19.37■□□□□ 0.69
SEMA4D-204ENST00000420101 TNNT2P45379 298 aaPredicted RBP19.37■□□□□ 0.69
SEMA4D-204ENST00000420101 A0A1W2PP64 1363 aa19.36■□□□□ 0.69
SEMA4D-204ENST00000420101 ZNF142P52746 1687 aaPredicted RBP19.36■□□□□ 0.69
SEMA4D-204ENST00000420101 DIP2AQ14689 1571 aa19.36■□□□□ 0.69
SEMA4D-204ENST00000420101 SETD1BQ9UPS6 1966 aaKnown RBP19.35■□□□□ 0.69
SEMA4D-204ENST00000420101 NUDT16Q96DE0 195 aaKnown RBP19.35■□□□□ 0.69
SEMA4D-204ENST00000420101 DDRGK1Q96HY6 314 aa19.34■□□□□ 0.69
SEMA4D-204ENST00000420101 WDR43Q15061 677 aaKnown RBP eCLIP19.33■□□□□ 0.69
SEMA4D-204ENST00000420101 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
SEMA4D-204ENST00000420101 NUTM2FA1L443 756 aa19.32■□□□□ 0.68
SEMA4D-204ENST00000420101 KCNA6P17658 529 aa19.31■□□□□ 0.68
SEMA4D-204ENST00000420101 PPIP5K1Q6PFW1 1433 aa19.31■□□□□ 0.68
SEMA4D-204ENST00000420101 CCDC61Q9Y6R9 512 aa19.3■□□□□ 0.68
SEMA4D-204ENST00000420101 NCKAP5LQ9HCH0 1330 aa19.3■□□□□ 0.68
SEMA4D-204ENST00000420101 NSD2O96028 1365 aa19.3■□□□□ 0.68
SEMA4D-204ENST00000420101 PIK3R4Q99570 1358 aa19.3■□□□□ 0.68
SEMA4D-204ENST00000420101 PTCH1Q13635 1447 aa19.29■□□□□ 0.68
SEMA4D-204ENST00000420101 NEFMP07197 916 aa19.29■□□□□ 0.68
SEMA4D-204ENST00000420101 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.29■□□□□ 0.68
SEMA4D-204ENST00000420101 GGNBP2Q9H3C7 697 aa19.29■□□□□ 0.68
SEMA4D-204ENST00000420101 NPHP4O75161 1426 aaPredicted RBP19.28■□□□□ 0.68
SEMA4D-204ENST00000420101 IL27Q8NEV9 243 aa19.28■□□□□ 0.68
SEMA4D-204ENST00000420101 CD163L1Q9NR16 1453 aa19.26■□□□□ 0.67
SEMA4D-204ENST00000420101 USP32Q8NFA0 1604 aa19.26■□□□□ 0.67
SEMA4D-204ENST00000420101 ATP7BP35670 1465 aa19.26■□□□□ 0.67
SEMA4D-204ENST00000420101 BACH2Q9BYV9 841 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms