RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 UNC5CLQ8IV45 518 aa23.37■■□□□ 1.33
PTPA-213ENST00000419582 DEFB132Q7Z7B7 95 aa23.35■■□□□ 1.33
PTPA-213ENST00000419582 ROBO2Q9HCK4 1378 aa23.35■■□□□ 1.33
PTPA-213ENST00000419582 ONECUT3O60422 494 aaPredicted RBP23.34■■□□□ 1.33
PTPA-213ENST00000419582 SLIT2O94813 1529 aa23.33■■□□□ 1.33
PTPA-213ENST00000419582 SF3B2Q13435 895 aaKnown RBP23.33■■□□□ 1.33
PTPA-213ENST00000419582 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.33■■□□□ 1.32
PTPA-213ENST00000419582 RALGAPBQ86X10 1494 aa23.32■■□□□ 1.32
PTPA-213ENST00000419582 PXDNQ92626 1479 aa23.32■■□□□ 1.32
PTPA-213ENST00000419582 SPHKAPQ2M3C7 1700 aa23.32■■□□□ 1.32
PTPA-213ENST00000419582 NEXMIFQ5QGS0 1516 aa23.32■■□□□ 1.32
PTPA-213ENST00000419582 HFM1A2PYH4 1435 aa23.32■■□□□ 1.32
PTPA-213ENST00000419582 MARF1Q9Y4F3 1742 aaKnown RBP23.3■■□□□ 1.32
PTPA-213ENST00000419582 GLI3P10071 1580 aa23.3■■□□□ 1.32
PTPA-213ENST00000419582 LRPPRCP42704 1394 aaKnown RBP23.29■■□□□ 1.32
PTPA-213ENST00000419582 VGFO15240 615 aaPredicted RBP23.29■■□□□ 1.32
PTPA-213ENST00000419582 ESCO1Q5FWF5 840 aa23.28■■□□□ 1.32
PTPA-213ENST00000419582 HRCP23327 699 aa23.27■■□□□ 1.32
PTPA-213ENST00000419582 FOXO3O43524 673 aa23.26■■□□□ 1.31
PTPA-213ENST00000419582 SEPT12Q8IYM1 358 aa23.26■■□□□ 1.31
PTPA-213ENST00000419582 VPS72Q15906 364 aa23.24■■□□□ 1.31
PTPA-213ENST00000419582 CDC42BPGQ6DT37 1551 aa23.22■■□□□ 1.31
PTPA-213ENST00000419582 KRT27Q7Z3Y8 459 aa23.21■■□□□ 1.31
PTPA-213ENST00000419582 SPATA31A3Q5VYP0 1347 aa23.21■■□□□ 1.31
PTPA-213ENST00000419582 RPGRIP1LQ68CZ1 1315 aa23.21■■□□□ 1.31
PTPA-213ENST00000419582 BAG6P46379 1132 aa23.2■■□□□ 1.3
PTPA-213ENST00000419582 BRWD3Q6RI45 1802 aa23.19■■□□□ 1.3
PTPA-213ENST00000419582 XPCQ01831 940 aaPredicted RBP23.17■■□□□ 1.3
PTPA-213ENST00000419582 PSDA5PKW4 1024 aaPredicted RBP23.16■■□□□ 1.3
PTPA-213ENST00000419582 CLTCL1P53675 1640 aa23.15■■□□□ 1.3
PTPA-213ENST00000419582 USP32Q8NFA0 1604 aa23.12■■□□□ 1.29
PTPA-213ENST00000419582 CCDC144AA2RUR9 1427 aa23.12■■□□□ 1.29
PTPA-213ENST00000419582 NAIPQ13075 1403 aa23.11■■□□□ 1.29
PTPA-213ENST00000419582 TECPR2O15040 1411 aa23.1■■□□□ 1.29
PTPA-213ENST00000419582 KRT28Q7Z3Y7 464 aa23.1■■□□□ 1.29
PTPA-213ENST00000419582 KIF1BO60333 1816 aa23.1■■□□□ 1.29
PTPA-213ENST00000419582 DISP2A7MBM2 1401 aa23.08■■□□□ 1.29
PTPA-213ENST00000419582 NWD2Q9ULI1 1742 aa23.08■■□□□ 1.29
PTPA-213ENST00000419582 ABCC11Q96J66 1382 aa23.06■■□□□ 1.28
PTPA-213ENST00000419582 PSME1Q06323 249 aa23.06■■□□□ 1.28
PTPA-213ENST00000419582 EN1Q05925 392 aaPredicted RBP23.05■■□□□ 1.28
PTPA-213ENST00000419582 R3HDM1Q15032 1099 aaKnown RBP23.04■■□□□ 1.28
PTPA-213ENST00000419582 CCDC9Q9Y3X0 531 aaKnown RBP23.04■■□□□ 1.28
PTPA-213ENST00000419582 KIF1AQ12756 1690 aa23.03■■□□□ 1.28
PTPA-213ENST00000419582 SBNO1A3KN83 1393 aa23.03■■□□□ 1.28
PTPA-213ENST00000419582 TNS3Q68CZ2 1445 aa23.03■■□□□ 1.28
PTPA-213ENST00000419582 FAM83GA6ND36 823 aa23.03■■□□□ 1.28
PTPA-213ENST00000419582 WAPLQ7Z5K2 1190 aa23.03■■□□□ 1.28
PTPA-213ENST00000419582 HAP1P54257 671 aaPredicted RBP23.02■■□□□ 1.28
PTPA-213ENST00000419582 SIRT1Q96EB6 747 aa23.02■■□□□ 1.28
PTPA-213ENST00000419582 NUTM2FA1L443 756 aa23.01■■□□□ 1.27
PTPA-213ENST00000419582 YY1P25490 414 aa23.01■■□□□ 1.27
PTPA-213ENST00000419582 CABLES1Q8TDN4 633 aa23■■□□□ 1.27
PTPA-213ENST00000419582 ARHGEF10O15013 1369 aa23■■□□□ 1.27
PTPA-213ENST00000419582 PLCH1Q4KWH8 1693 aa22.98■■□□□ 1.27
PTPA-213ENST00000419582 FAM98CQ17RN3 349 aaKnown RBP22.98■■□□□ 1.27
PTPA-213ENST00000419582 PHF8Q9UPP1 1060 aa22.98■■□□□ 1.27
PTPA-213ENST00000419582 CAMKK2Q96RR4 588 aa22.97■■□□□ 1.27
PTPA-213ENST00000419582 RGPD1P0DJD0 1748 aa22.96■■□□□ 1.27
PTPA-213ENST00000419582 FMN2Q9NZ56 1722 aa22.96■■□□□ 1.27
PTPA-213ENST00000419582 PPLO60437 1756 aa22.96■■□□□ 1.27
PTPA-213ENST00000419582 ITGAEP38570 1179 aa22.95■■□□□ 1.26
PTPA-213ENST00000419582 PARD3Q8TEW0 1356 aa22.95■■□□□ 1.26
PTPA-213ENST00000419582 STK26Q9P289 416 aa22.94■■□□□ 1.26
PTPA-213ENST00000419582 PLEKHH1Q9ULM0 1364 aa22.93■■□□□ 1.26
PTPA-213ENST00000419582 ADGRF5Q8IZF2 1346 aa22.93■■□□□ 1.26
PTPA-213ENST00000419582 A0A0G2JS52 829 aa22.93■■□□□ 1.26
PTPA-213ENST00000419582 MYT1Q01538 1121 aa22.93■■□□□ 1.26
PTPA-213ENST00000419582 EZH2Q15910 746 aaKnown RBP22.93■■□□□ 1.26
PTPA-213ENST00000419582 NRXN1Q9ULB1 1477 aa22.92■■□□□ 1.26
PTPA-213ENST00000419582 SPATA31A5Q5VU36 1347 aa22.92■■□□□ 1.26
PTPA-213ENST00000419582 SPATA31A7Q8IWB4 1347 aa22.92■■□□□ 1.26
PTPA-213ENST00000419582 BTG4Q9NY30 223 aa22.92■■□□□ 1.26
PTPA-213ENST00000419582 ANKRD30BQ9BXX2 1392 aa22.89■■□□□ 1.26
PTPA-213ENST00000419582 KNDC1Q76NI1 1749 aa22.89■■□□□ 1.26
PTPA-213ENST00000419582 NRAPQ86VF7 1730 aa22.89■■□□□ 1.26
PTPA-213ENST00000419582 RRBP1Q9P2E9 1410 aaKnown RBP22.89■■□□□ 1.25
PTPA-213ENST00000419582 ABCA3Q99758 1704 aa22.88■■□□□ 1.25
PTPA-213ENST00000419582 FAM196AQ6ZSG2 479 aa22.88■■□□□ 1.25
PTPA-213ENST00000419582 FAM182BQ5T319 152 aa22.87■■□□□ 1.25
PTPA-213ENST00000419582 TMEM132EQ6IEE7 984 aa22.87■■□□□ 1.25
PTPA-213ENST00000419582 TNS1Q9HBL0 1735 aaKnown RBP22.86■■□□□ 1.25
PTPA-213ENST00000419582 YTHDC2Q9H6S0 1430 aaKnown RBP22.86■■□□□ 1.25
PTPA-213ENST00000419582 LMOD2Q6P5Q4 547 aa22.86■■□□□ 1.25
PTPA-213ENST00000419582 THSD7AQ9UPZ6 1657 aa22.85■■□□□ 1.25
PTPA-213ENST00000419582 COL14A1Q05707 1796 aaKnown RBP22.84■■□□□ 1.25
PTPA-213ENST00000419582 DCAF8L1A6NGE4 600 aa22.83■■□□□ 1.25
PTPA-213ENST00000419582 ADGRB2O60241 1585 aa22.83■■□□□ 1.25
PTPA-213ENST00000419582 PIK3C2GO75747 1445 aa22.82■■□□□ 1.24
PTPA-213ENST00000419582 NINLQ9Y2I6 1382 aa22.82■■□□□ 1.24
PTPA-213ENST00000419582 TRIM37O94972 964 aa22.82■■□□□ 1.24
PTPA-213ENST00000419582 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
PTPA-213ENST00000419582 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
PTPA-213ENST00000419582 ANKARQ7Z5J8 1434 aa22.82■■□□□ 1.24
PTPA-213ENST00000419582 APBA3O96018 575 aa22.81■■□□□ 1.24
PTPA-213ENST00000419582 NBPF8Q3BBV2 869 aa22.81■■□□□ 1.24
PTPA-213ENST00000419582 NBPF14Q5TI25 921 aa22.81■■□□□ 1.24
PTPA-213ENST00000419582 SPON1Q9HCB6 807 aa22.8■■□□□ 1.24
PTPA-213ENST00000419582 SPATA31A1Q5TZJ5 1347 aa22.8■■□□□ 1.24
PTPA-213ENST00000419582 C14orf93Q9H972 538 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms