RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 NISCHQ9Y2I1 1504 aa39.04■■■■□ 3.84
PTPA-213ENST00000419582 ABCC9O60706 1549 aa36.05■■■■□ 3.36
PTPA-213ENST00000419582 CCDC180Q9P1Z9 1646 aa35.34■■■■□ 3.25
PTPA-213ENST00000419582 DNAJC5BQ9UF47 199 aa34.68■■■■□ 3.14
PTPA-213ENST00000419582 RB1CC1Q8TDY2 1594 aa34.05■■■■□ 3.04
PTPA-213ENST00000419582 NACADO15069 1562 aa33.68■■■□□ 2.98
PTPA-213ENST00000419582 PABPN1Q86U42 306 aaKnown RBP eCLIP33.46■■■□□ 2.95
PTPA-213ENST00000419582 DCAF8L2P0C7V8 631 aa33.16■■■□□ 2.9
PTPA-213ENST00000419582 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
PTPA-213ENST00000419582 BICRAQ9NZM4 1560 aa33.09■■■□□ 2.89
PTPA-213ENST00000419582 MYO15BQ96JP2 1530 aa33.08■■■□□ 2.89
PTPA-213ENST00000419582 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
PTPA-213ENST00000419582 CECR2Q9BXF3 1484 aa32.64■■■□□ 2.82
PTPA-213ENST00000419582 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
PTPA-213ENST00000419582 DNAJC5Q9H3Z4 198 aa32.54■■■□□ 2.8
PTPA-213ENST00000419582 EIF4G1Q04637 1599 aaKnown RBP32.32■■■□□ 2.77
PTPA-213ENST00000419582 DCAF1Q9Y4B6 1507 aa32.31■■■□□ 2.76
PTPA-213ENST00000419582 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
PTPA-213ENST00000419582 SCRIBQ14160 1630 aa31.99■■■□□ 2.71
PTPA-213ENST00000419582 CUX2O14529 1486 aa31.56■■■□□ 2.64
PTPA-213ENST00000419582 ERCC6Q03468 1493 aa31.2■■■□□ 2.58
PTPA-213ENST00000419582 NCAPD3P42695 1498 aa31.18■■■□□ 2.58
PTPA-213ENST00000419582 ATAD2BQ9ULI0 1458 aa30.88■■■□□ 2.53
PTPA-213ENST00000419582 HMGXB3Q12766 1538 aa30.78■■■□□ 2.52
PTPA-213ENST00000419582 NESP48681 1621 aa30.74■■■□□ 2.51
PTPA-213ENST00000419582 SMARCA2P51531 1590 aa30.74■■■□□ 2.51
PTPA-213ENST00000419582 THOC2Q8NI27 1593 aaKnown RBP30.61■■■□□ 2.49
PTPA-213ENST00000419582 SMARCA4P51532 1647 aa30.55■■■□□ 2.48
PTPA-213ENST00000419582 TRIM41Q8WV44 630 aa30.53■■■□□ 2.48
PTPA-213ENST00000419582 LAMC3Q9Y6N6 1575 aa30.5■■■□□ 2.47
PTPA-213ENST00000419582 BAZ1BQ9UIG0 1483 aaKnown RBP30.46■■■□□ 2.47
PTPA-213ENST00000419582 PDS5BQ9NTI5 1447 aa30.4■■■□□ 2.46
PTPA-213ENST00000419582 PEG3Q9GZU2 1588 aa30.39■■■□□ 2.46
PTPA-213ENST00000419582 BAZ1AQ9NRL2 1556 aaPredicted RBP30.34■■■□□ 2.45
PTPA-213ENST00000419582 KIF21AQ7Z4S6 1674 aa30.23■■■□□ 2.43
PTPA-213ENST00000419582 CADPSQ9ULU8 1353 aa30.15■■■□□ 2.42
PTPA-213ENST00000419582 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
PTPA-213ENST00000419582 WDR62O43379 1518 aa30.07■■■□□ 2.4
PTPA-213ENST00000419582 OSCARQ8IYS5 282 aa30.01■■■□□ 2.39
PTPA-213ENST00000419582 MROH2BQ7Z745 1585 aa30.01■■■□□ 2.39
PTPA-213ENST00000419582 CEP164Q9UPV0 1460 aa29.81■■■□□ 2.36
PTPA-213ENST00000419582 FANCD2Q9BXW9 1451 aa29.71■■■□□ 2.35
PTPA-213ENST00000419582 CFTRP13569 1480 aa29.63■■■□□ 2.33
PTPA-213ENST00000419582 RIMBP3CA6NJZ7 1639 aa29.54■■■□□ 2.32
PTPA-213ENST00000419582 RIMBP3BA6NNM3 1639 aa29.54■■■□□ 2.32
PTPA-213ENST00000419582 RIMBP3Q9UFD9 1639 aa29.54■■■□□ 2.32
PTPA-213ENST00000419582 WIZO95785 1651 aa29.52■■■□□ 2.32
PTPA-213ENST00000419582 URB2Q14146 1524 aaKnown RBP29.51■■■□□ 2.32
PTPA-213ENST00000419582 ARHGEF11O15085 1522 aa29.41■■■□□ 2.3
PTPA-213ENST00000419582 IFT140Q96RY7 1462 aa29.3■■■□□ 2.28
PTPA-213ENST00000419582 CYB5RLQ6IPT4 315 aa29.27■■■□□ 2.28
PTPA-213ENST00000419582 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
PTPA-213ENST00000419582 TOP2AP11388 1531 aaKnown RBP29.18■■■□□ 2.26
PTPA-213ENST00000419582 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
PTPA-213ENST00000419582 TRHP20396 242 aaPredicted RBP29.14■■■□□ 2.26
PTPA-213ENST00000419582 ARAP1Q96P48 1450 aa29.07■■■□□ 2.24
PTPA-213ENST00000419582 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
PTPA-213ENST00000419582 TOPBP1Q92547 1522 aa29.05■■■□□ 2.24
PTPA-213ENST00000419582 PRDM2Q13029 1718 aa29.05■■■□□ 2.24
PTPA-213ENST00000419582 EIF4G3O43432 1585 aaKnown RBP29■■■□□ 2.23
PTPA-213ENST00000419582 AEBP2Q6ZN18 517 aaPredicted RBP28.92■■■□□ 2.22
PTPA-213ENST00000419582 AQRO60306 1485 aaKnown RBP eCLIP28.91■■■□□ 2.223e-7■■■■■ 30.5
PTPA-213ENST00000419582 CCDC88BA6NC98 1476 aa28.89■■■□□ 2.22
PTPA-213ENST00000419582 CHD1O14646 1710 aa28.87■■■□□ 2.21
PTPA-213ENST00000419582 DNMBPQ6XZF7 1577 aa28.87■■■□□ 2.21
PTPA-213ENST00000419582 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
PTPA-213ENST00000419582 FBLN2P98095 1184 aa28.83■■■□□ 2.21
PTPA-213ENST00000419582 POLA1P09884 1462 aaPredicted RBP28.72■■■□□ 2.19
PTPA-213ENST00000419582 CLASP1Q7Z460 1538 aa28.69■■■□□ 2.18
PTPA-213ENST00000419582 TDRD9Q8NDG6 1382 aaKnown RBP28.61■■■□□ 2.17
PTPA-213ENST00000419582 SOGA1O94964 1423 aa28.6■■■□□ 2.17
PTPA-213ENST00000419582 WDR97A6NE52 1622 aa28.6■■■□□ 2.17
PTPA-213ENST00000419582 CHMP7Q8WUX9 453 aaPredicted RBP28.58■■■□□ 2.17
PTPA-213ENST00000419582 RAD54L2Q9Y4B4 1467 aa28.57■■■□□ 2.16
PTPA-213ENST00000419582 SYNJ1O43426 1573 aa28.56■■■□□ 2.16
PTPA-213ENST00000419582 SNAPC4Q5SXM2 1469 aa28.55■■■□□ 2.16
PTPA-213ENST00000419582 MAGI1Q96QZ7 1491 aaPredicted RBP28.54■■■□□ 2.16
PTPA-213ENST00000419582 SYNJ2O15056 1496 aa28.45■■■□□ 2.14
PTPA-213ENST00000419582 GRIN2BQ13224 1484 aa28.45■■■□□ 2.14
PTPA-213ENST00000419582 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
PTPA-213ENST00000419582 FGD5Q6ZNL6 1462 aa28.38■■■□□ 2.13
PTPA-213ENST00000419582 CUX1P39880 1505 aa28.23■■■□□ 2.11
PTPA-213ENST00000419582 ABCA10Q8WWZ4 1543 aa28.1■■■□□ 2.09
PTPA-213ENST00000419582 PBRM1Q86U86 1689 aa28.1■■■□□ 2.09
PTPA-213ENST00000419582 ERCC6L2Q5T890 1561 aa28.08■■■□□ 2.09
PTPA-213ENST00000419582 NUP160Q12769 1436 aa28.06■■■□□ 2.08
PTPA-213ENST00000419582 GRIN2AQ12879 1464 aa28.05■■■□□ 2.08
PTPA-213ENST00000419582 ABCA5Q8WWZ7 1642 aa28.04■■■□□ 2.08
PTPA-213ENST00000419582 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
PTPA-213ENST00000419582 SHROOM2Q13796 1616 aa27.96■■■□□ 2.07
PTPA-213ENST00000419582 KIF13AQ9H1H9 1805 aa27.94■■■□□ 2.06
PTPA-213ENST00000419582 FHAD1B1AJZ9 1412 aa27.87■■■□□ 2.05
PTPA-213ENST00000419582 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
PTPA-213ENST00000419582 ABCC10Q5T3U5 1492 aa27.85■■■□□ 2.05
PTPA-213ENST00000419582 WRNQ14191 1432 aaPredicted RBP eCLIP27.83■■■□□ 2.051e-6■■□□□ 12
PTPA-213ENST00000419582 KDM4FA0A1W2PPD8 638 aa27.82■■■□□ 2.04
PTPA-213ENST00000419582 FAM69CQ0P6D2 419 aa27.82■■■□□ 2.04
PTPA-213ENST00000419582 JPH4Q96JJ6 628 aa27.79■■■□□ 2.04
PTPA-213ENST00000419582 PRG4Q92954 1404 aaPredicted RBP27.78■■■□□ 2.04
PTPA-213ENST00000419582 ILDR1Q86SU0 546 aaPredicted RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms