RNA–Protein interactions for RNA: ENST00000417466.5

VGLL4-205, Transcript of vestigial like family member 4, humanhuman

TSL 3

Gene VGLL4, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-205ENST00000417466 CDK12Q9NYV4 1490 aaPredicted RBP33.35■■■□□ 2.93
VGLL4-205ENST00000417466 TECPR2O15040 1411 aa33.35■■■□□ 2.93
VGLL4-205ENST00000417466 LRPPRCP42704 1394 aaKnown RBP33.34■■■□□ 2.93
VGLL4-205ENST00000417466 PIK3C2GO75747 1445 aa33.32■■■□□ 2.92
VGLL4-205ENST00000417466 TMEM132EQ6IEE7 984 aa33.32■■■□□ 2.92
VGLL4-205ENST00000417466 WAPLQ7Z5K2 1190 aa33.32■■■□□ 2.92
VGLL4-205ENST00000417466 UPF1Q92900 1129 aaKnown RBP eCLIP33.32■■■□□ 2.92
VGLL4-205ENST00000417466 ADAMTS2O95450 1211 aa33.31■■■□□ 2.92
VGLL4-205ENST00000417466 KNDC1Q76NI1 1749 aa33.31■■■□□ 2.92
VGLL4-205ENST00000417466 ACIN1Q9UKV3 1341 aaKnown RBP33.3■■■□□ 2.92
VGLL4-205ENST00000417466 ESCO1Q5FWF5 840 aa33.3■■■□□ 2.92
VGLL4-205ENST00000417466 QTRT2Q9H974 415 aaKnown RBP33.3■■■□□ 2.92
VGLL4-205ENST00000417466 ABCC11Q96J66 1382 aa33.3■■■□□ 2.92
VGLL4-205ENST00000417466 NGLY1Q96IV0 654 aa33.28■■■□□ 2.92
VGLL4-205ENST00000417466 COL22A1Q8NFW1 1626 aaPredicted RBP33.27■■■□□ 2.92
VGLL4-205ENST00000417466 PLEKHH1Q9ULM0 1364 aa33.26■■■□□ 2.92
VGLL4-205ENST00000417466 NPHP3Q7Z494 1330 aa33.26■■■□□ 2.91
VGLL4-205ENST00000417466 RBM6P78332 1123 aaKnown RBP33.25■■■□□ 2.91
VGLL4-205ENST00000417466 PXDNQ92626 1479 aa33.24■■■□□ 2.91
VGLL4-205ENST00000417466 YTHDC2Q9H6S0 1430 aaKnown RBP33.23■■■□□ 2.91
VGLL4-205ENST00000417466 NUTM2FA1L443 756 aa33.22■■■□□ 2.91
VGLL4-205ENST00000417466 FOXO3O43524 673 aa33.22■■■□□ 2.91
VGLL4-205ENST00000417466 RGS12O14924 1447 aa33.2■■■□□ 2.91
VGLL4-205ENST00000417466 C14orf93Q9H972 538 aaKnown RBP33.2■■■□□ 2.91
VGLL4-205ENST00000417466 FMN2Q9NZ56 1722 aa33.19■■■□□ 2.9
VGLL4-205ENST00000417466 NRXN1Q9ULB1 1477 aa33.19■■■□□ 2.9
VGLL4-205ENST00000417466 XPCQ01831 940 aaPredicted RBP33.18■■■□□ 2.9
VGLL4-205ENST00000417466 MYOM2P54296 1465 aa33.18■■■□□ 2.9
VGLL4-205ENST00000417466 SIRT1Q96EB6 747 aa33.17■■■□□ 2.9
VGLL4-205ENST00000417466 RAB3GAP2Q9H2M9 1393 aa33.17■■■□□ 2.9
VGLL4-205ENST00000417466 FNBP4Q8N3X1 1017 aaPredicted RBP33.16■■■□□ 2.9
VGLL4-205ENST00000417466 USP21Q9UK80 565 aa33.16■■■□□ 2.9
VGLL4-205ENST00000417466 CFAP70Q5T0N1 1121 aa33.15■■■□□ 2.9
VGLL4-205ENST00000417466 MARF1Q9Y4F3 1742 aaKnown RBP33.11■■■□□ 2.89
VGLL4-205ENST00000417466 DHX57Q6P158 1386 aaKnown RBP33.11■■■□□ 2.89
VGLL4-205ENST00000417466 TRPC5Q9UL62 973 aaPredicted RBP33.1■■■□□ 2.89
VGLL4-205ENST00000417466 KIF1AQ12756 1690 aa33.1■■■□□ 2.89
VGLL4-205ENST00000417466 RGPD8O14715 1765 aaPredicted RBP33.09■■■□□ 2.89
VGLL4-205ENST00000417466 ATRNO75882 1429 aa33.07■■■□□ 2.88
VGLL4-205ENST00000417466 SPATA31A3Q5VYP0 1347 aa33.04■■■□□ 2.88
VGLL4-205ENST00000417466 BCL9LQ86UU0 1499 aa33.04■■■□□ 2.88
VGLL4-205ENST00000417466 PRAM1Q96QH2 718 aa33.03■■■□□ 2.88
VGLL4-205ENST00000417466 KRT28Q7Z3Y7 464 aa33.02■■■□□ 2.88
VGLL4-205ENST00000417466 SAFB2Q14151 953 aaKnown RBP eCLIP33.01■■■□□ 2.87
VGLL4-205ENST00000417466 PHF8Q9UPP1 1060 aa33■■■□□ 2.87
VGLL4-205ENST00000417466 DLC1Q96QB1 1528 aa32.99■■■□□ 2.87
VGLL4-205ENST00000417466 ADGRB1O14514 1584 aa32.97■■■□□ 2.87
VGLL4-205ENST00000417466 POGKQ9P215 609 aa32.95■■■□□ 2.87
VGLL4-205ENST00000417466 ATAD2Q6PL18 1390 aa32.95■■■□□ 2.86
VGLL4-205ENST00000417466 PSME1Q06323 249 aa32.93■■■□□ 2.86
VGLL4-205ENST00000417466 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.93■■■□□ 2.86
VGLL4-205ENST00000417466 TNS3Q68CZ2 1445 aa32.93■■■□□ 2.86
VGLL4-205ENST00000417466 USP32Q8NFA0 1604 aa32.92■■■□□ 2.86
VGLL4-205ENST00000417466 GJD4Q96KN9 370 aaPredicted RBP32.92■■■□□ 2.86
VGLL4-205ENST00000417466 KDM2AQ9Y2K7 1162 aa32.92■■■□□ 2.86
VGLL4-205ENST00000417466 DCAF11Q8TEB1 546 aa32.91■■■□□ 2.86
VGLL4-205ENST00000417466 SLIT2O94813 1529 aa32.91■■■□□ 2.86
VGLL4-205ENST00000417466 ADGRB2O60241 1585 aa32.91■■■□□ 2.86
VGLL4-205ENST00000417466 HRCP23327 699 aa32.9■■■□□ 2.86
VGLL4-205ENST00000417466 TRAK1Q9UPV9 953 aa32.9■■■□□ 2.86
VGLL4-205ENST00000417466 ANKARQ7Z5J8 1434 aa32.89■■■□□ 2.86
VGLL4-205ENST00000417466 SBNO1A3KN83 1393 aa32.88■■■□□ 2.85
VGLL4-205ENST00000417466 UNC5CLQ8IV45 518 aa32.88■■■□□ 2.85
VGLL4-205ENST00000417466 PMFBP1Q8TBY8 1022 aa32.86■■■□□ 2.85
VGLL4-205ENST00000417466 CABLES1Q8TDN4 633 aa32.86■■■□□ 2.85
VGLL4-205ENST00000417466 STAC3Q96MF2 364 aa32.85■■■□□ 2.85
VGLL4-205ENST00000417466 HIRIP3Q9BW71 556 aaPredicted RBP32.85■■■□□ 2.85
VGLL4-205ENST00000417466 EP400Q96L91 3159 aa32.83■■■□□ 2.85
VGLL4-205ENST00000417466 HAP1P54257 671 aaPredicted RBP32.83■■■□□ 2.85
VGLL4-205ENST00000417466 GLI3P10071 1580 aa32.83■■■□□ 2.85
VGLL4-205ENST00000417466 ABCA3Q99758 1704 aa32.82■■■□□ 2.85
VGLL4-205ENST00000417466 RALGAPBQ86X10 1494 aa32.82■■■□□ 2.84
VGLL4-205ENST00000417466 MINK1Q8N4C8 1332 aaPredicted RBP32.81■■■□□ 2.84
VGLL4-205ENST00000417466 PLEKHG5O94827 1062 aa32.81■■■□□ 2.84
VGLL4-205ENST00000417466 LMOD2Q6P5Q4 547 aa32.81■■■□□ 2.84
VGLL4-205ENST00000417466 ARHGEF10O15013 1369 aa32.81■■■□□ 2.84
VGLL4-205ENST00000417466 PRR36Q9H6K5 1346 aa32.78■■■□□ 2.84
VGLL4-205ENST00000417466 TRPM3Q9HCF6 1732 aaPredicted RBP32.78■■■□□ 2.84
VGLL4-205ENST00000417466 PLCH1Q4KWH8 1693 aa32.78■■■□□ 2.84
VGLL4-205ENST00000417466 NWD2Q9ULI1 1742 aa32.77■■■□□ 2.84
VGLL4-205ENST00000417466 TULP4Q9NRJ4 1543 aa32.77■■■□□ 2.84
VGLL4-205ENST00000417466 EIF3AQ14152 1382 aaKnown RBP32.76■■■□□ 2.83
VGLL4-205ENST00000417466 WASLO00401 505 aaPredicted RBP32.76■■■□□ 2.83
VGLL4-205ENST00000417466 ARHGEF28Q8N1W1 1705 aaKnown RBP32.73■■■□□ 2.83
VGLL4-205ENST00000417466 ALS2Q96Q42 1657 aa32.72■■■□□ 2.83
VGLL4-205ENST00000417466 VPS72Q15906 364 aa32.72■■■□□ 2.83
VGLL4-205ENST00000417466 CCDC125Q86Z20 511 aa32.72■■■□□ 2.83
VGLL4-205ENST00000417466 BRWD3Q6RI45 1802 aa32.72■■■□□ 2.83
VGLL4-205ENST00000417466 GPRASP1Q5JY77 1395 aa32.71■■■□□ 2.83
VGLL4-205ENST00000417466 FAM83GA6ND36 823 aa32.71■■■□□ 2.83
VGLL4-205ENST00000417466 ONECUT3O60422 494 aaPredicted RBP32.65■■■□□ 2.82
VGLL4-205ENST00000417466 SEPT12Q8IYM1 358 aa32.65■■■□□ 2.82
VGLL4-205ENST00000417466 NGDNQ8NEJ9 315 aaKnown RBP32.65■■■□□ 2.82
VGLL4-205ENST00000417466 CCDC9Q9Y3X0 531 aaKnown RBP32.64■■■□□ 2.82
VGLL4-205ENST00000417466 ITSN1Q15811 1721 aa32.63■■■□□ 2.81
VGLL4-205ENST00000417466 NRAPQ86VF7 1730 aa32.63■■■□□ 2.81
VGLL4-205ENST00000417466 ATP7BP35670 1465 aa32.62■■■□□ 2.81
VGLL4-205ENST00000417466 CRYBG1Q9Y4K1 1723 aa32.61■■■□□ 2.81
VGLL4-205ENST00000417466 NUDT16Q96DE0 195 aaKnown RBP32.61■■■□□ 2.81
VGLL4-205ENST00000417466 KIAA1210Q9ULL0 1709 aa32.6■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms