RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 DIP2AQ14689 1571 aa23.25■■□□□ 1.31
CALD1-204ENST00000417172 KDM4FA0A1W2PPD8 638 aa23.24■■□□□ 1.31
CALD1-204ENST00000417172 TMC1Q8TDI8 760 aa23.24■■□□□ 1.31
CALD1-204ENST00000417172 SLC12A5Q9H2X9 1139 aa23.24■■□□□ 1.31
CALD1-204ENST00000417172 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
CALD1-204ENST00000417172 SRPK2P78362 688 aaKnown RBP23.23■■□□□ 1.31
CALD1-204ENST00000417172 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
CALD1-204ENST00000417172 TBX22Q9Y458 520 aa23.22■■□□□ 1.31
CALD1-204ENST00000417172 FAM135BQ49AJ0 1406 aa23.21■■□□□ 1.31
CALD1-204ENST00000417172 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.21■■□□□ 1.31
CALD1-204ENST00000417172 CARD14Q9BXL6 1004 aa23.21■■□□□ 1.31
CALD1-204ENST00000417172 KTN1Q86UP2 1357 aaKnown RBP23.2■■□□□ 1.31
CALD1-204ENST00000417172 XRN1Q8IZH2 1706 aaKnown RBP23.2■■□□□ 1.3
CALD1-204ENST00000417172 CDK19Q9BWU1 502 aa23.2■■□□□ 1.3
CALD1-204ENST00000417172 AMOTL2Q9Y2J4 779 aa23.19■■□□□ 1.3
CALD1-204ENST00000417172 KNSTRNQ9Y448 316 aa23.19■■□□□ 1.3
CALD1-204ENST00000417172 PARD3Q8TEW0 1356 aa23.18■■□□□ 1.3
CALD1-204ENST00000417172 AMER1Q5JTC6 1135 aaPredicted RBP23.17■■□□□ 1.3
CALD1-204ENST00000417172 MRS2Q9HD23 443 aa23.17■■□□□ 1.3
CALD1-204ENST00000417172 NCKAP5LQ9HCH0 1330 aa23.16■■□□□ 1.3
CALD1-204ENST00000417172 SIRT1Q96EB6 747 aa23.16■■□□□ 1.3
CALD1-204ENST00000417172 PUS7Q96PZ0 661 aaKnown RBP23.16■■□□□ 1.3
CALD1-204ENST00000417172 CHD2O14647 1828 aaKnown RBP23.15■■□□□ 1.3
CALD1-204ENST00000417172 RALBP1Q15311 655 aa23.14■■□□□ 1.3
CALD1-204ENST00000417172 NPHP4O75161 1426 aaPredicted RBP23.14■■□□□ 1.29
CALD1-204ENST00000417172 NSD3Q9BZ95 1437 aa23.14■■□□□ 1.29
CALD1-204ENST00000417172 ATAD2Q6PL18 1390 aa23.12■■□□□ 1.29
CALD1-204ENST00000417172 MYBBP1AQ9BQG0 1328 aaKnown RBP23.12■■□□□ 1.29
CALD1-204ENST00000417172 PTCH1Q13635 1447 aa23.12■■□□□ 1.29
CALD1-204ENST00000417172 WASLO00401 505 aaPredicted RBP23.12■■□□□ 1.29
CALD1-204ENST00000417172 KCNA6P17658 529 aa23.12■■□□□ 1.29
CALD1-204ENST00000417172 ADGRB2O60241 1585 aa23.1■■□□□ 1.29
CALD1-204ENST00000417172 CD163L1Q9NR16 1453 aa23.1■■□□□ 1.29
CALD1-204ENST00000417172 A0A1W2PP64 1363 aa23.1■■□□□ 1.29
CALD1-204ENST00000417172 ANKRD36BQ8N2N9 1353 aa23.1■■□□□ 1.29
CALD1-204ENST00000417172 HSPA2P54652 639 aa23.09■■□□□ 1.29
CALD1-204ENST00000417172 FAM9BQ8IZU0 186 aa23.08■■□□□ 1.28
CALD1-204ENST00000417172 CABP1Q9NZU7 370 aa23.08■■□□□ 1.28
CALD1-204ENST00000417172 PIK3R4Q99570 1358 aa23.07■■□□□ 1.28
CALD1-204ENST00000417172 USP32Q8NFA0 1604 aa23.06■■□□□ 1.28
CALD1-204ENST00000417172 NINLQ9Y2I6 1382 aa23.06■■□□□ 1.28
CALD1-204ENST00000417172 CENPBP07199 599 aaPredicted RBP23.06■■□□□ 1.28
CALD1-204ENST00000417172 NPC1L1Q9UHC9 1359 aa23.05■■□□□ 1.28
CALD1-204ENST00000417172 PRR36Q9H6K5 1346 aa23.05■■□□□ 1.28
CALD1-204ENST00000417172 ATP7BP35670 1465 aa23.04■■□□□ 1.28
CALD1-204ENST00000417172 NUTM2FA1L443 756 aa23.04■■□□□ 1.28
CALD1-204ENST00000417172 RBM33Q96EV2 1170 aaKnown RBP23.04■■□□□ 1.28
CALD1-204ENST00000417172 LMTK3Q96Q04 1460 aa23.03■■□□□ 1.28
CALD1-204ENST00000417172 RGPD8O14715 1765 aaPredicted RBP23.03■■□□□ 1.28
CALD1-204ENST00000417172 BRD4O60885 1362 aaPredicted RBP23.03■■□□□ 1.28
CALD1-204ENST00000417172 NUDT16Q96DE0 195 aaKnown RBP23.03■■□□□ 1.28
CALD1-204ENST00000417172 PPIP5K1Q6PFW1 1433 aa23.03■■□□□ 1.28
CALD1-204ENST00000417172 NALCNQ8IZF0 1738 aa23.02■■□□□ 1.28
CALD1-204ENST00000417172 NLRP13Q86W25 1043 aa23.02■■□□□ 1.28
CALD1-204ENST00000417172 TOPAZ1Q8N9V7 1692 aa23.02■■□□□ 1.27
CALD1-204ENST00000417172 PPP2R1AP30153 589 aa23■■□□□ 1.27
CALD1-204ENST00000417172 TERF2IPQ9NYB0 399 aa22.99■■□□□ 1.27
CALD1-204ENST00000417172 ITSN1Q15811 1721 aa22.98■■□□□ 1.27
CALD1-204ENST00000417172 PNISRQ8TF01 805 aaKnown RBP22.98■■□□□ 1.27
CALD1-204ENST00000417172 CGNL1Q0VF96 1302 aa22.98■■□□□ 1.27
CALD1-204ENST00000417172 AKAP12Q02952 1782 aa22.97■■□□□ 1.27
CALD1-204ENST00000417172 CDC42BPGQ6DT37 1551 aa22.97■■□□□ 1.27
CALD1-204ENST00000417172 KIF20BQ96Q89 1820 aa22.97■■□□□ 1.27
CALD1-204ENST00000417172 STRCQ7RTU9 1775 aa22.97■■□□□ 1.27
CALD1-204ENST00000417172 NWD1Q149M9 1564 aa22.96■■□□□ 1.27
CALD1-204ENST00000417172 HDGFL2Q7Z4V5 671 aaPredicted RBP22.96■■□□□ 1.27
CALD1-204ENST00000417172 TNNT2P45379 298 aaPredicted RBP22.96■■□□□ 1.27
CALD1-204ENST00000417172 CCDC61Q9Y6R9 512 aa22.96■■□□□ 1.27
CALD1-204ENST00000417172 MON2Q7Z3U7 1717 aa22.96■■□□□ 1.27
CALD1-204ENST00000417172 NKTRP30414 1462 aaKnown RBP22.95■■□□□ 1.26
CALD1-204ENST00000417172 STRCP1A6NGW2 1772 aa22.95■■□□□ 1.26
CALD1-204ENST00000417172 HNRNPUQ00839 825 aaKnown RBP eCLIP22.95■■□□□ 1.26
CALD1-204ENST00000417172 CPSF1Q10570 1443 aaKnown RBP22.95■■□□□ 1.26
CALD1-204ENST00000417172 ANKRD26Q9UPS8 1709 aa22.95■■□□□ 1.26
CALD1-204ENST00000417172 FMN2Q9NZ56 1722 aa22.94■■□□□ 1.26
CALD1-204ENST00000417172 MORC1Q86VD1 984 aa22.93■■□□□ 1.26
CALD1-204ENST00000417172 GGNBP2Q9H3C7 697 aa22.92■■□□□ 1.26
CALD1-204ENST00000417172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.92■■□□□ 1.26
CALD1-204ENST00000417172 SENP3-EIF4A1A0A087X0R7 540 aa22.91■■□□□ 1.26
CALD1-204ENST00000417172 PELP1Q8IZL8 1130 aaKnown RBP22.9■■□□□ 1.26
CALD1-204ENST00000417172 FYB1O15117 783 aa22.9■■□□□ 1.26
CALD1-204ENST00000417172 NSD2O96028 1365 aa22.89■■□□□ 1.25
CALD1-204ENST00000417172 ADGRL3Q9HAR2 1447 aa22.87■■□□□ 1.25
CALD1-204ENST00000417172 NRKQ7Z2Y5 1582 aa22.87■■□□□ 1.25
CALD1-204ENST00000417172 PMFBP1Q8TBY8 1022 aa22.86■■□□□ 1.25
CALD1-204ENST00000417172 EDC4Q6P2E9 1401 aaKnown RBP22.86■■□□□ 1.25
CALD1-204ENST00000417172 ACEP12821 1306 aa22.86■■□□□ 1.25
CALD1-204ENST00000417172 PLEKHG3A1L390 1219 aa22.84■■□□□ 1.25
CALD1-204ENST00000417172 ZRANB1Q9UGI0 708 aa22.84■■□□□ 1.25
CALD1-204ENST00000417172 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
CALD1-204ENST00000417172 PROSER2Q86WR7 435 aaPredicted RBP22.83■■□□□ 1.25
CALD1-204ENST00000417172 NME9Q86XW9 330 aa22.83■■□□□ 1.25
CALD1-204ENST00000417172 ANKARQ7Z5J8 1434 aa22.82■■□□□ 1.24
CALD1-204ENST00000417172 USP6P35125 1406 aa22.8■■□□□ 1.24
CALD1-204ENST00000417172 SHPRHQ149N8 1683 aa22.8■■□□□ 1.24
CALD1-204ENST00000417172 FBLN1P23142 703 aa22.79■■□□□ 1.24
CALD1-204ENST00000417172 MTHFSP49914 203 aa22.79■■□□□ 1.24
CALD1-204ENST00000417172 ZNF692Q9BU19 519 aaPredicted RBP22.78■■□□□ 1.24
CALD1-204ENST00000417172 POLR3AO14802 1390 aaPredicted RBP22.77■■□□□ 1.24
CALD1-204ENST00000417172 ADAMTS8Q9UP79 889 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms