RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 TESK2Q96S53 571 aa17.81■□□□□ 0.44
HNF4A-204ENST00000415691 ABCC11Q96J66 1382 aa17.8■□□□□ 0.44
HNF4A-204ENST00000415691 KCNA6P17658 529 aa17.78■□□□□ 0.44
HNF4A-204ENST00000415691 IRX6P78412 446 aaPredicted RBP17.78■□□□□ 0.44
HNF4A-204ENST00000415691 CENPJQ9HC77 1338 aaPredicted RBP17.78■□□□□ 0.44
HNF4A-204ENST00000415691 PLEKHH1Q9ULM0 1364 aa17.78■□□□□ 0.44
HNF4A-204ENST00000415691 POGKQ9P215 609 aa17.78■□□□□ 0.44
HNF4A-204ENST00000415691 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.44
HNF4A-204ENST00000415691 ROBO2Q9HCK4 1378 aa17.77■□□□□ 0.44
HNF4A-204ENST00000415691 DIP2AQ14689 1571 aa17.77■□□□□ 0.44
HNF4A-204ENST00000415691 RBM33Q96EV2 1170 aaKnown RBP17.76■□□□□ 0.43
HNF4A-204ENST00000415691 PIK3R4Q99570 1358 aa17.75■□□□□ 0.43
HNF4A-204ENST00000415691 RTL5Q5HYW3 569 aaPredicted RBP17.75■□□□□ 0.43
HNF4A-204ENST00000415691 MINK1Q8N4C8 1332 aaPredicted RBP17.74■□□□□ 0.43
HNF4A-204ENST00000415691 ARHGEF28Q8N1W1 1705 aaKnown RBP17.74■□□□□ 0.43
HNF4A-204ENST00000415691 PAK3O75914 559 aaPredicted RBP17.73■□□□□ 0.43
HNF4A-204ENST00000415691 TECPR2O15040 1411 aa17.73■□□□□ 0.43
HNF4A-204ENST00000415691 WASHC2AQ641Q2 1341 aa17.73■□□□□ 0.43
HNF4A-204ENST00000415691 NBR1Q14596 966 aa17.73■□□□□ 0.43
HNF4A-204ENST00000415691 SIRT1Q96EB6 747 aa17.73■□□□□ 0.43
HNF4A-204ENST00000415691 IPO9Q96P70 1041 aaKnown RBP17.73■□□□□ 0.43
HNF4A-204ENST00000415691 POLR3GLQ9BT43 218 aa17.73■□□□□ 0.43
HNF4A-204ENST00000415691 DISP3Q9P2K9 1392 aa17.73■□□□□ 0.43
HNF4A-204ENST00000415691 DLC1Q96QB1 1528 aa17.72■□□□□ 0.43
HNF4A-204ENST00000415691 SALL2Q9Y467 1007 aaPredicted RBP17.71■□□□□ 0.43
HNF4A-204ENST00000415691 KIF7Q2M1P5 1343 aa17.71■□□□□ 0.43
HNF4A-204ENST00000415691 ZBED9Q6R2W3 1325 aa17.7■□□□□ 0.42
HNF4A-204ENST00000415691 ANP32AP39687 249 aaKnown RBP17.7■□□□□ 0.42
HNF4A-204ENST00000415691 TMF1P82094 1093 aa17.7■□□□□ 0.42
HNF4A-204ENST00000415691 CHD2O14647 1828 aaKnown RBP17.7■□□□□ 0.42
HNF4A-204ENST00000415691 FAM135BQ49AJ0 1406 aa17.7■□□□□ 0.42
HNF4A-204ENST00000415691 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
HNF4A-204ENST00000415691 CPS1P31327 1500 aa17.69■□□□□ 0.42
HNF4A-204ENST00000415691 ZNF335Q9H4Z2 1342 aaPredicted RBP17.69■□□□□ 0.42
HNF4A-204ENST00000415691 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
HNF4A-204ENST00000415691 XRN1Q8IZH2 1706 aaKnown RBP17.68■□□□□ 0.42
HNF4A-204ENST00000415691 CCDC7Q96M83 1385 aa17.68■□□□□ 0.42
HNF4A-204ENST00000415691 QRICH2Q9H0J4 1663 aa17.67■□□□□ 0.42
HNF4A-204ENST00000415691 KNDC1Q76NI1 1749 aa17.67■□□□□ 0.42
HNF4A-204ENST00000415691 PROSER2Q86WR7 435 aaPredicted RBP17.67■□□□□ 0.42
HNF4A-204ENST00000415691 PTCH1Q13635 1447 aa17.66■□□□□ 0.42
HNF4A-204ENST00000415691 CABP2Q9NPB3 220 aa17.66■□□□□ 0.42
HNF4A-204ENST00000415691 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
HNF4A-204ENST00000415691 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
HNF4A-204ENST00000415691 UBE2Q2Q8WVN8 375 aa17.65■□□□□ 0.42
HNF4A-204ENST00000415691 USP35Q9P2H5 1018 aa17.65■□□□□ 0.42
HNF4A-204ENST00000415691 STRCP1A6NGW2 1772 aa17.64■□□□□ 0.41
HNF4A-204ENST00000415691 ZBTB47Q9UFB7 747 aaPredicted RBP17.64■□□□□ 0.41
HNF4A-204ENST00000415691 EVC2Q86UK5 1308 aa17.64■□□□□ 0.41
HNF4A-204ENST00000415691 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
HNF4A-204ENST00000415691 WASLO00401 505 aaPredicted RBP17.63■□□□□ 0.41
HNF4A-204ENST00000415691 SLC24A1O60721 1099 aa17.63■□□□□ 0.41
HNF4A-204ENST00000415691 SRPK2P78362 688 aaKnown RBP17.63■□□□□ 0.41
HNF4A-204ENST00000415691 TULP4Q9NRJ4 1543 aa17.62■□□□□ 0.41
HNF4A-204ENST00000415691 NWD1Q149M9 1564 aa17.62■□□□□ 0.41
HNF4A-204ENST00000415691 NUTM2FA1L443 756 aa17.62■□□□□ 0.41
HNF4A-204ENST00000415691 C14orf37Q86TY3 774 aa17.6■□□□□ 0.41
HNF4A-204ENST00000415691 CDCA8Q53HL2 280 aa17.6■□□□□ 0.41
HNF4A-204ENST00000415691 TMEM94Q12767 1356 aa17.59■□□□□ 0.41
HNF4A-204ENST00000415691 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
HNF4A-204ENST00000415691 SMG6Q86US8 1419 aaKnown RBP17.59■□□□□ 0.41
HNF4A-204ENST00000415691 IL27Q8NEV9 243 aa17.58■□□□□ 0.41
HNF4A-204ENST00000415691 NKTRP30414 1462 aaKnown RBP17.58■□□□□ 0.4
HNF4A-204ENST00000415691 SLC12A5Q9H2X9 1139 aa17.58■□□□□ 0.4
HNF4A-204ENST00000415691 TMC1Q8TDI8 760 aa17.57■□□□□ 0.4
HNF4A-204ENST00000415691 PRR36Q9H6K5 1346 aa17.56■□□□□ 0.4
HNF4A-204ENST00000415691 NUDT16Q96DE0 195 aaKnown RBP17.55■□□□□ 0.4
HNF4A-204ENST00000415691 LRRC7Q96NW7 1537 aa17.55■□□□□ 0.4
HNF4A-204ENST00000415691 CCDC136Q96JN2 1154 aa17.55■□□□□ 0.4
HNF4A-204ENST00000415691 PUS7Q96PZ0 661 aaKnown RBP17.55■□□□□ 0.4
HNF4A-204ENST00000415691 C19orf44Q9H6X5 657 aa17.54■□□□□ 0.4
HNF4A-204ENST00000415691 PRKRIP1Q9H875 184 aaPredicted RBP17.54■□□□□ 0.4
HNF4A-204ENST00000415691 PANK3Q9H999 370 aa17.54■□□□□ 0.4
HNF4A-204ENST00000415691 CABP1Q9NZU7 370 aa17.54■□□□□ 0.4
HNF4A-204ENST00000415691 ADGRL3Q9HAR2 1447 aa17.54■□□□□ 0.4
HNF4A-204ENST00000415691 NALCNQ8IZF0 1738 aa17.53■□□□□ 0.4
HNF4A-204ENST00000415691 ADGRB2O60241 1585 aa17.52■□□□□ 0.39
HNF4A-204ENST00000415691 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
HNF4A-204ENST00000415691 ATAD2Q6PL18 1390 aa17.5■□□□□ 0.39
HNF4A-204ENST00000415691 CCDC184Q52MB2 194 aa17.49■□□□□ 0.39
HNF4A-204ENST00000415691 NCOA3Q9Y6Q9 1424 aa17.49■□□□□ 0.39
HNF4A-204ENST00000415691 LTBP4Q8N2S1 1624 aa17.49■□□□□ 0.39
HNF4A-204ENST00000415691 PMFBP1Q8TBY8 1022 aa17.48■□□□□ 0.39
HNF4A-204ENST00000415691 CARD14Q9BXL6 1004 aa17.48■□□□□ 0.39
HNF4A-204ENST00000415691 XIRP1Q702N8 1843 aaKnown RBP17.48■□□□□ 0.39
HNF4A-204ENST00000415691 ATP7BP35670 1465 aa17.48■□□□□ 0.39
HNF4A-204ENST00000415691 ATF3P18847 181 aa17.48■□□□□ 0.39
HNF4A-204ENST00000415691 CNGB1Q14028 1251 aaPredicted RBP17.48■□□□□ 0.39
HNF4A-204ENST00000415691 MRS2Q9HD23 443 aa17.48■□□□□ 0.39
HNF4A-204ENST00000415691 PPIP5K1Q6PFW1 1433 aa17.47■□□□□ 0.39
HNF4A-204ENST00000415691 MYOM1P52179 1685 aa17.47■□□□□ 0.39
HNF4A-204ENST00000415691 MSH6P52701 1360 aa17.47■□□□□ 0.39
HNF4A-204ENST00000415691 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
HNF4A-204ENST00000415691 PER1O15534 1290 aaPredicted RBP17.47■□□□□ 0.39
HNF4A-204ENST00000415691 ORAI2Q96SN7 254 aa17.46■□□□□ 0.39
HNF4A-204ENST00000415691 NUDCQ9Y266 331 aa17.46■□□□□ 0.39
HNF4A-204ENST00000415691 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
HNF4A-204ENST00000415691 USP32Q8NFA0 1604 aa17.46■□□□□ 0.39
HNF4A-204ENST00000415691 ESCO1Q5FWF5 840 aa17.45■□□□□ 0.38
HNF4A-204ENST00000415691 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms