RNA–Protein interactions for RNA: ENST00000415356.1

AC007349.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC007349.3, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007349.3-201ENST00000415356 ROBO2Q9HCK4 1378 aa11.23□□□□□ -0.61
AC007349.3-201ENST00000415356 ATRNO75882 1429 aa11.22□□□□□ -0.61
AC007349.3-201ENST00000415356 SOS2Q07890 1332 aaPredicted RBP11.22□□□□□ -0.61
AC007349.3-201ENST00000415356 BRWD3Q6RI45 1802 aa11.21□□□□□ -0.61
AC007349.3-201ENST00000415356 MARF1Q9Y4F3 1742 aaKnown RBP11.21□□□□□ -0.61
AC007349.3-201ENST00000415356 ROCK1Q13464 1354 aa11.21□□□□□ -0.61
AC007349.3-201ENST00000415356 PPARGC1BQ86YN6 1023 aaKnown RBP11.21□□□□□ -0.61
AC007349.3-201ENST00000415356 COL22A1Q8NFW1 1626 aaPredicted RBP11.2□□□□□ -0.62
AC007349.3-201ENST00000415356 ATAD2Q6PL18 1390 aa11.2□□□□□ -0.62
AC007349.3-201ENST00000415356 XPCQ01831 940 aaPredicted RBP11.2□□□□□ -0.62
AC007349.3-201ENST00000415356 KIF1BO60333 1816 aa11.2□□□□□ -0.62
AC007349.3-201ENST00000415356 BCL9LQ86UU0 1499 aa11.19□□□□□ -0.62
AC007349.3-201ENST00000415356 FNBP4Q8N3X1 1017 aaPredicted RBP11.19□□□□□ -0.62
AC007349.3-201ENST00000415356 TRPC5Q9UL62 973 aaPredicted RBP11.19□□□□□ -0.62
AC007349.3-201ENST00000415356 MYOM2P54296 1465 aa11.19□□□□□ -0.62
AC007349.3-201ENST00000415356 GLI3P10071 1580 aa11.17□□□□□ -0.62
AC007349.3-201ENST00000415356 PXDNQ92626 1479 aa11.17□□□□□ -0.62
AC007349.3-201ENST00000415356 PTCH1Q13635 1447 aa11.17□□□□□ -0.62
AC007349.3-201ENST00000415356 NUTM2FA1L443 756 aa11.16□□□□□ -0.62
AC007349.3-201ENST00000415356 DEFB132Q7Z7B7 95 aa11.16□□□□□ -0.62
AC007349.3-201ENST00000415356 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
AC007349.3-201ENST00000415356 PPLO60437 1756 aa11.15□□□□□ -0.62
AC007349.3-201ENST00000415356 RGPD8O14715 1765 aaPredicted RBP11.14□□□□□ -0.63
AC007349.3-201ENST00000415356 FOXO3O43524 673 aa11.13□□□□□ -0.63
AC007349.3-201ENST00000415356 ESCO1Q5FWF5 840 aa11.13□□□□□ -0.63
AC007349.3-201ENST00000415356 GJD4Q96KN9 370 aaPredicted RBP11.13□□□□□ -0.63
AC007349.3-201ENST00000415356 RALGAPBQ86X10 1494 aa11.12□□□□□ -0.63
AC007349.3-201ENST00000415356 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.12□□□□□ -0.63
AC007349.3-201ENST00000415356 WAPLQ7Z5K2 1190 aa11.12□□□□□ -0.63
AC007349.3-201ENST00000415356 PLEKHH1Q9ULM0 1364 aa11.12□□□□□ -0.63
AC007349.3-201ENST00000415356 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
AC007349.3-201ENST00000415356 CDC42BPGQ6DT37 1551 aa11.11□□□□□ -0.63
AC007349.3-201ENST00000415356 PRAG1Q86YV5 1406 aa11.1□□□□□ -0.63
AC007349.3-201ENST00000415356 SLIT2O94813 1529 aa11.1□□□□□ -0.63
AC007349.3-201ENST00000415356 ADGRF5Q8IZF2 1346 aa11.09□□□□□ -0.63
AC007349.3-201ENST00000415356 NAIPQ13075 1403 aa11.09□□□□□ -0.63
AC007349.3-201ENST00000415356 CABLES1Q8TDN4 633 aa11.09□□□□□ -0.63
AC007349.3-201ENST00000415356 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
AC007349.3-201ENST00000415356 STK26Q9P289 416 aa11.09□□□□□ -0.63
AC007349.3-201ENST00000415356 HFM1A2PYH4 1435 aa11.09□□□□□ -0.63
AC007349.3-201ENST00000415356 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
AC007349.3-201ENST00000415356 FMN2Q9NZ56 1722 aa11.08□□□□□ -0.64
AC007349.3-201ENST00000415356 USP32Q8NFA0 1604 aa11.08□□□□□ -0.64
AC007349.3-201ENST00000415356 PLCH1Q4KWH8 1693 aa11.08□□□□□ -0.64
AC007349.3-201ENST00000415356 ABCA3Q99758 1704 aa11.07□□□□□ -0.64
AC007349.3-201ENST00000415356 PSDA5PKW4 1024 aaPredicted RBP11.07□□□□□ -0.64
AC007349.3-201ENST00000415356 VGFO15240 615 aaPredicted RBP11.07□□□□□ -0.64
AC007349.3-201ENST00000415356 IFFO2Q5TF58 517 aa11.07□□□□□ -0.64
AC007349.3-201ENST00000415356 TMEM132EQ6IEE7 984 aa11.07□□□□□ -0.64
AC007349.3-201ENST00000415356 UNC5CLQ8IV45 518 aa11.07□□□□□ -0.64
AC007349.3-201ENST00000415356 BLMP54132 1417 aaPredicted RBP11.07□□□□□ -0.64
AC007349.3-201ENST00000415356 DSG3P32926 999 aa11.06□□□□□ -0.64
AC007349.3-201ENST00000415356 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
AC007349.3-201ENST00000415356 SEPT12Q8IYM1 358 aa11.06□□□□□ -0.64
AC007349.3-201ENST00000415356 IFT172Q9UG01 1749 aa11.06□□□□□ -0.64
AC007349.3-201ENST00000415356 SPATA31A3Q5VYP0 1347 aa11.06□□□□□ -0.64
AC007349.3-201ENST00000415356 LRP5O75197 1615 aa11.06□□□□□ -0.64
AC007349.3-201ENST00000415356 KNDC1Q76NI1 1749 aa11.04□□□□□ -0.64
AC007349.3-201ENST00000415356 RGL3Q3MIN7 710 aa11.03□□□□□ -0.64
AC007349.3-201ENST00000415356 FAM182BQ5T319 152 aa11.03□□□□□ -0.64
AC007349.3-201ENST00000415356 KRT28Q7Z3Y7 464 aa11.03□□□□□ -0.64
AC007349.3-201ENST00000415356 NRAPQ86VF7 1730 aa11.03□□□□□ -0.64
AC007349.3-201ENST00000415356 TECPR2O15040 1411 aa11.02□□□□□ -0.64
AC007349.3-201ENST00000415356 RRBP1Q9P2E9 1410 aaKnown RBP11.02□□□□□ -0.64
AC007349.3-201ENST00000415356 KIF1AQ12756 1690 aa11.02□□□□□ -0.64
AC007349.3-201ENST00000415356 NWD2Q9ULI1 1742 aa11.02□□□□□ -0.65
AC007349.3-201ENST00000415356 RPGRIP1LQ68CZ1 1315 aa11.02□□□□□ -0.65
AC007349.3-201ENST00000415356 LRPPRCP42704 1394 aaKnown RBP11.02□□□□□ -0.65
AC007349.3-201ENST00000415356 HRCP23327 699 aa11.01□□□□□ -0.65
AC007349.3-201ENST00000415356 VPS72Q15906 364 aa11.01□□□□□ -0.65
AC007349.3-201ENST00000415356 TNS3Q68CZ2 1445 aa11.01□□□□□ -0.65
AC007349.3-201ENST00000415356 SPATA31E1Q6ZUB1 1445 aa11.01□□□□□ -0.65
AC007349.3-201ENST00000415356 FAM83GA6ND36 823 aa11□□□□□ -0.65
AC007349.3-201ENST00000415356 ONECUT3O60422 494 aaPredicted RBP11□□□□□ -0.65
AC007349.3-201ENST00000415356 KRT27Q7Z3Y8 459 aa11□□□□□ -0.65
AC007349.3-201ENST00000415356 SLC4A1APQ9BWU0 796 aaKnown RBP11□□□□□ -0.65
AC007349.3-201ENST00000415356 CCDC9Q9Y3X0 531 aaKnown RBP11□□□□□ -0.65
AC007349.3-201ENST00000415356 EN1Q05925 392 aaPredicted RBP10.99□□□□□ -0.65
AC007349.3-201ENST00000415356 SAFB2Q14151 953 aaKnown RBP eCLIP10.99□□□□□ -0.65
AC007349.3-201ENST00000415356 FAM98CQ17RN3 349 aaKnown RBP10.99□□□□□ -0.65
AC007349.3-201ENST00000415356 ABCC11Q96J66 1382 aa10.99□□□□□ -0.65
AC007349.3-201ENST00000415356 CCDC144AA2RUR9 1427 aa10.99□□□□□ -0.65
AC007349.3-201ENST00000415356 YTHDC2Q9H6S0 1430 aaKnown RBP10.99□□□□□ -0.65
AC007349.3-201ENST00000415356 TNS1Q9HBL0 1735 aaKnown RBP10.98□□□□□ -0.65
AC007349.3-201ENST00000415356 TRPM3Q9HCF6 1732 aaPredicted RBP10.98□□□□□ -0.65
AC007349.3-201ENST00000415356 LMOD2Q6P5Q4 547 aa10.98□□□□□ -0.65
AC007349.3-201ENST00000415356 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
AC007349.3-201ENST00000415356 PIK3C2GO75747 1445 aa10.98□□□□□ -0.65
AC007349.3-201ENST00000415356 HAP1P54257 671 aaPredicted RBP10.97□□□□□ -0.65
AC007349.3-201ENST00000415356 SF3B2Q13435 895 aaKnown RBP10.97□□□□□ -0.65
AC007349.3-201ENST00000415356 PPP4R3CPQ6ZMV5 832 aa10.97□□□□□ -0.65
AC007349.3-201ENST00000415356 PMFBP1Q8TBY8 1022 aa10.97□□□□□ -0.65
AC007349.3-201ENST00000415356 NRXN1Q9ULB1 1477 aa10.97□□□□□ -0.65
AC007349.3-201ENST00000415356 CRYBG1Q9Y4K1 1723 aa10.96□□□□□ -0.65
AC007349.3-201ENST00000415356 A0A0G2JS52 829 aa10.96□□□□□ -0.65
AC007349.3-201ENST00000415356 MYT1Q01538 1121 aa10.96□□□□□ -0.65
AC007349.3-201ENST00000415356 R3HDM1Q15032 1099 aaKnown RBP10.96□□□□□ -0.65
AC007349.3-201ENST00000415356 RGPD1P0DJD0 1748 aa10.95□□□□□ -0.66
AC007349.3-201ENST00000415356 ALS2Q96Q42 1657 aa10.95□□□□□ -0.66
AC007349.3-201ENST00000415356 CFAP70Q5T0N1 1121 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms