RNA–Protein interactions for RNA: ENST00000415356.1

AC007349.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC007349.3, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007349.3-201ENST00000415356 NISCHQ9Y2I1 1504 aa18.72■□□□□ 0.59
AC007349.3-201ENST00000415356 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
AC007349.3-201ENST00000415356 ABCC9O60706 1549 aa17.25■□□□□ 0.35
AC007349.3-201ENST00000415356 CHIC1Q5VXU3 224 aa17.11■□□□□ 0.33
AC007349.3-201ENST00000415356 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
AC007349.3-201ENST00000415356 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
AC007349.3-201ENST00000415356 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
AC007349.3-201ENST00000415356 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
AC007349.3-201ENST00000415356 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
AC007349.3-201ENST00000415356 NACADO15069 1562 aa15.99■□□□□ 0.15
AC007349.3-201ENST00000415356 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
AC007349.3-201ENST00000415356 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
AC007349.3-201ENST00000415356 BICRAQ9NZM4 1560 aa15.84■□□□□ 0.13
AC007349.3-201ENST00000415356 SENP3Q9H4L4 574 aaPredicted RBP15.83■□□□□ 0.12
AC007349.3-201ENST00000415356 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
AC007349.3-201ENST00000415356 CC2D2AQ9P2K1 1620 aa15.54■□□□□ 0.08
AC007349.3-201ENST00000415356 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
AC007349.3-201ENST00000415356 CECR2Q9BXF3 1484 aa15.51■□□□□ 0.07
AC007349.3-201ENST00000415356 SCRIBQ14160 1630 aa15.46■□□□□ 0.07
AC007349.3-201ENST00000415356 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.06
AC007349.3-201ENST00000415356 DNAJC5Q9H3Z4 198 aa15.45■□□□□ 0.06
AC007349.3-201ENST00000415356 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
AC007349.3-201ENST00000415356 SHROOM4Q9ULL8 1493 aa15.37■□□□□ 0.05
AC007349.3-201ENST00000415356 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
AC007349.3-201ENST00000415356 FOXD1Q16676 465 aa15.03■□□□□ -0
AC007349.3-201ENST00000415356 CUX2O14529 1486 aa14.84□□□□□ -0.03
AC007349.3-201ENST00000415356 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
AC007349.3-201ENST00000415356 NESP48681 1621 aa14.78□□□□□ -0.04
AC007349.3-201ENST00000415356 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
AC007349.3-201ENST00000415356 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
AC007349.3-201ENST00000415356 SMARCA4P51532 1647 aa14.68□□□□□ -0.06
AC007349.3-201ENST00000415356 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
AC007349.3-201ENST00000415356 THOC2Q8NI27 1593 aaKnown RBP14.63□□□□□ -0.07
AC007349.3-201ENST00000415356 SMARCA2P51531 1590 aa14.62□□□□□ -0.07
AC007349.3-201ENST00000415356 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
AC007349.3-201ENST00000415356 KIF21AQ7Z4S6 1674 aa14.56□□□□□ -0.08
AC007349.3-201ENST00000415356 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
AC007349.3-201ENST00000415356 MROH2BQ7Z745 1585 aa14.49□□□□□ -0.09
AC007349.3-201ENST00000415356 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
AC007349.3-201ENST00000415356 PEG3Q9GZU2 1588 aa14.48□□□□□ -0.09
AC007349.3-201ENST00000415356 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
AC007349.3-201ENST00000415356 MSH5O43196 834 aa14.47□□□□□ -0.09
AC007349.3-201ENST00000415356 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
AC007349.3-201ENST00000415356 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
AC007349.3-201ENST00000415356 WIZO95785 1651 aa14.33□□□□□ -0.12
AC007349.3-201ENST00000415356 MRC2Q9UBG0 1479 aa14.32□□□□□ -0.12
AC007349.3-201ENST00000415356 WDR62O43379 1518 aa14.31□□□□□ -0.12
AC007349.3-201ENST00000415356 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
AC007349.3-201ENST00000415356 FANCD2Q9BXW9 1451 aa14.19□□□□□ -0.14
AC007349.3-201ENST00000415356 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
AC007349.3-201ENST00000415356 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
AC007349.3-201ENST00000415356 CFTRP13569 1480 aa14.12□□□□□ -0.15
AC007349.3-201ENST00000415356 RIMBP3CA6NJZ7 1639 aa14.08□□□□□ -0.15
AC007349.3-201ENST00000415356 RIMBP3BA6NNM3 1639 aa14.08□□□□□ -0.15
AC007349.3-201ENST00000415356 RIMBP3Q9UFD9 1639 aa14.08□□□□□ -0.15
AC007349.3-201ENST00000415356 RSF1Q96T23 1441 aaPredicted RBP14.05□□□□□ -0.16
AC007349.3-201ENST00000415356 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
AC007349.3-201ENST00000415356 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
AC007349.3-201ENST00000415356 PRDM2Q13029 1718 aa13.99□□□□□ -0.17
AC007349.3-201ENST00000415356 ARHGEF11O15085 1522 aa13.98□□□□□ -0.17
AC007349.3-201ENST00000415356 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
AC007349.3-201ENST00000415356 IFT140Q96RY7 1462 aa13.92□□□□□ -0.18
AC007349.3-201ENST00000415356 TOPBP1Q92547 1522 aa13.91□□□□□ -0.18
AC007349.3-201ENST00000415356 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
AC007349.3-201ENST00000415356 CHD1O14646 1710 aa13.9□□□□□ -0.18
AC007349.3-201ENST00000415356 CYB5RLQ6IPT4 315 aa13.9□□□□□ -0.18
AC007349.3-201ENST00000415356 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.19
AC007349.3-201ENST00000415356 ARAP1Q96P48 1450 aa13.86□□□□□ -0.19
AC007349.3-201ENST00000415356 TARBP1Q13395 1621 aaKnown RBP13.83□□□□□ -0.2
AC007349.3-201ENST00000415356 DNMBPQ6XZF7 1577 aa13.81□□□□□ -0.2
AC007349.3-201ENST00000415356 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
AC007349.3-201ENST00000415356 FBLN2P98095 1184 aa13.77□□□□□ -0.21
AC007349.3-201ENST00000415356 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.21
AC007349.3-201ENST00000415356 POLA1P09884 1462 aaPredicted RBP13.76□□□□□ -0.21
AC007349.3-201ENST00000415356 PIAS4Q8N2W9 510 aaPredicted RBP13.73□□□□□ -0.21
AC007349.3-201ENST00000415356 ABCC8Q09428 1581 aa13.73□□□□□ -0.21
AC007349.3-201ENST00000415356 TDRD9Q8NDG6 1382 aaKnown RBP13.72□□□□□ -0.21
AC007349.3-201ENST00000415356 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
AC007349.3-201ENST00000415356 CLASP1Q7Z460 1538 aa13.68□□□□□ -0.22
AC007349.3-201ENST00000415356 SOGA1O94964 1423 aa13.65□□□□□ -0.22
AC007349.3-201ENST00000415356 FGD5Q6ZNL6 1462 aa13.64□□□□□ -0.23
AC007349.3-201ENST00000415356 CUX1P39880 1505 aa13.62□□□□□ -0.23
AC007349.3-201ENST00000415356 SYNJ1O43426 1573 aa13.58□□□□□ -0.23
AC007349.3-201ENST00000415356 CHMP7Q8WUX9 453 aaPredicted RBP13.58□□□□□ -0.24
AC007349.3-201ENST00000415356 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
AC007349.3-201ENST00000415356 ERCC6L2Q5T890 1561 aa13.56□□□□□ -0.24
AC007349.3-201ENST00000415356 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
AC007349.3-201ENST00000415356 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
AC007349.3-201ENST00000415356 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
AC007349.3-201ENST00000415356 SYNJ2O15056 1496 aa13.53□□□□□ -0.24
AC007349.3-201ENST00000415356 GAPVD1Q14C86 1478 aa13.53□□□□□ -0.24
AC007349.3-201ENST00000415356 ABCA5Q8WWZ7 1642 aa13.47□□□□□ -0.25
AC007349.3-201ENST00000415356 ILDR1Q86SU0 546 aaPredicted RBP13.46□□□□□ -0.25
AC007349.3-201ENST00000415356 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
AC007349.3-201ENST00000415356 ABCA10Q8WWZ4 1543 aa13.43□□□□□ -0.26
AC007349.3-201ENST00000415356 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
AC007349.3-201ENST00000415356 GRIN2AQ12879 1464 aa13.41□□□□□ -0.26
AC007349.3-201ENST00000415356 KIF13AQ9H1H9 1805 aa13.41□□□□□ -0.26
AC007349.3-201ENST00000415356 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
AC007349.3-201ENST00000415356 NUP160Q12769 1436 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms