RNA–Protein interactions for RNA: ENST00000415338.1

AC239798.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC239798.2, Length 3,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239798.2-201ENST00000415338 ABCC1P33527 1531 aa17.76■□□□□ 0.43
AC239798.2-201ENST00000415338 RRS1Q15050 365 aaKnown RBP17.76■□□□□ 0.43
AC239798.2-201ENST00000415338 FAM161AQ3B820 660 aa17.76■□□□□ 0.43
AC239798.2-201ENST00000415338 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
AC239798.2-201ENST00000415338 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
AC239798.2-201ENST00000415338 ZRANB1Q9UGI0 708 aa17.75■□□□□ 0.43
AC239798.2-201ENST00000415338 TRHP20396 242 aaPredicted RBP17.74■□□□□ 0.43
AC239798.2-201ENST00000415338 NUTM2GQ5VZR2 741 aa17.74■□□□□ 0.43
AC239798.2-201ENST00000415338 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
AC239798.2-201ENST00000415338 PRKAR2BP31323 418 aa17.73■□□□□ 0.43
AC239798.2-201ENST00000415338 MFAP1P55081 439 aaKnown RBP17.73■□□□□ 0.43
AC239798.2-201ENST00000415338 TRPM1Q7Z4N2 1603 aa17.73■□□□□ 0.43
AC239798.2-201ENST00000415338 SLC26A8Q96RN1 970 aa17.73■□□□□ 0.43
AC239798.2-201ENST00000415338 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
AC239798.2-201ENST00000415338 RLBP1P12271 317 aa17.72■□□□□ 0.43
AC239798.2-201ENST00000415338 LMOD2Q6P5Q4 547 aa17.72■□□□□ 0.43
AC239798.2-201ENST00000415338 LTV1Q96GA3 475 aaPredicted RBP17.72■□□□□ 0.43
AC239798.2-201ENST00000415338 CEBPAP49715 358 aaPredicted RBP17.71■□□□□ 0.43
AC239798.2-201ENST00000415338 NPATQ14207 1427 aa17.71■□□□□ 0.43
AC239798.2-201ENST00000415338 MS4A1P11836 297 aa17.71■□□□□ 0.42
AC239798.2-201ENST00000415338 DCTN1Q14203 1278 aa17.7■□□□□ 0.42
AC239798.2-201ENST00000415338 ZKSCAN2Q63HK3 967 aa17.7■□□□□ 0.42
AC239798.2-201ENST00000415338 RBM33Q96EV2 1170 aaKnown RBP17.7■□□□□ 0.42
AC239798.2-201ENST00000415338 EMILIN1Q9Y6C2 1016 aa17.7■□□□□ 0.42
AC239798.2-201ENST00000415338 HSP90AA1P07900 732 aaKnown RBP17.69■□□□□ 0.42
AC239798.2-201ENST00000415338 RARSP54136 660 aaKnown RBP17.69■□□□□ 0.42
AC239798.2-201ENST00000415338 RTEL1-TNFRSF6BF6WH68 1400 aa17.69■□□□□ 0.42
AC239798.2-201ENST00000415338 NME9Q86XW9 330 aa17.69■□□□□ 0.42
AC239798.2-201ENST00000415338 ZNF518AQ6AHZ1 1483 aa17.69■□□□□ 0.42
AC239798.2-201ENST00000415338 PMFBP1Q8TBY8 1022 aa17.69■□□□□ 0.42
AC239798.2-201ENST00000415338 DZIP1LQ8IYY4 767 aaKnown RBP17.68■□□□□ 0.42
AC239798.2-201ENST00000415338 PRDM15P57071 1507 aaPredicted RBP17.68■□□□□ 0.42
AC239798.2-201ENST00000415338 ZFYVE16Q7Z3T8 1539 aa17.68■□□□□ 0.42
AC239798.2-201ENST00000415338 SLC52A1Q9NWF4 448 aa17.68■□□□□ 0.42
AC239798.2-201ENST00000415338 NECTIN2Q92692 538 aa17.67■□□□□ 0.42
AC239798.2-201ENST00000415338 EIF2AK4Q9P2K8 1649 aaKnown RBP17.67■□□□□ 0.42
AC239798.2-201ENST00000415338 RWDD1Q9H446 243 aaPredicted RBP17.67■□□□□ 0.42
AC239798.2-201ENST00000415338 FYB1O15117 783 aa17.67■□□□□ 0.42
AC239798.2-201ENST00000415338 NOB1Q9ULX3 412 aaKnown RBP17.67■□□□□ 0.42
AC239798.2-201ENST00000415338 CLTCL1P53675 1640 aa17.66■□□□□ 0.42
AC239798.2-201ENST00000415338 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
AC239798.2-201ENST00000415338 LNPKQ9C0E8 428 aa17.66■□□□□ 0.42
AC239798.2-201ENST00000415338 FOXD4L1Q9NU39 408 aa17.66■□□□□ 0.42
AC239798.2-201ENST00000415338 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
AC239798.2-201ENST00000415338 PCDHB15Q9Y5E8 787 aa17.66■□□□□ 0.42
AC239798.2-201ENST00000415338 NKTRP30414 1462 aaKnown RBP17.66■□□□□ 0.42
AC239798.2-201ENST00000415338 IQGAP3Q86VI3 1631 aa17.66■□□□□ 0.42
AC239798.2-201ENST00000415338 YEATS2Q9ULM3 1422 aa17.65■□□□□ 0.42
AC239798.2-201ENST00000415338 SSH1Q8WYL5 1049 aa17.65■□□□□ 0.42
AC239798.2-201ENST00000415338 ERVK-7P63135 1459 aa17.65■□□□□ 0.42
AC239798.2-201ENST00000415338 BLMP54132 1417 aaPredicted RBP17.64■□□□□ 0.41
AC239798.2-201ENST00000415338 E9PCH4 1651 aa17.64■□□□□ 0.41
AC239798.2-201ENST00000415338 COG3Q96JB2 828 aa17.64■□□□□ 0.41
AC239798.2-201ENST00000415338 UNC13BO14795 1591 aa17.63■□□□□ 0.41
AC239798.2-201ENST00000415338 FAM83GA6ND36 823 aa17.63■□□□□ 0.41
AC239798.2-201ENST00000415338 GZF1Q9H116 711 aaPredicted RBP17.63■□□□□ 0.41
AC239798.2-201ENST00000415338 SEC24BO95487 1268 aa17.63■□□□□ 0.41
AC239798.2-201ENST00000415338 SLC4A10Q6U841 1118 aa17.61■□□□□ 0.41
AC239798.2-201ENST00000415338 NGDNQ8NEJ9 315 aaKnown RBP17.61■□□□□ 0.41
AC239798.2-201ENST00000415338 A0A1W2PP64 1363 aa17.61■□□□□ 0.41
AC239798.2-201ENST00000415338 RPGRIP1LQ68CZ1 1315 aa17.61■□□□□ 0.41
AC239798.2-201ENST00000415338 ZNF428Q96B54 188 aa17.61■□□□□ 0.41
AC239798.2-201ENST00000415338 MIS18AQ9NYP9 233 aa17.61■□□□□ 0.41
AC239798.2-201ENST00000415338 PLXNC1O60486 1568 aa17.6■□□□□ 0.41
AC239798.2-201ENST00000415338 PTPRTO14522 1441 aa17.6■□□□□ 0.41
AC239798.2-201ENST00000415338 BECN1Q14457 450 aa17.6■□□□□ 0.41
AC239798.2-201ENST00000415338 ANKRD45Q5TZF3 282 aa17.6■□□□□ 0.41
AC239798.2-201ENST00000415338 TRPM2O94759 1503 aa17.6■□□□□ 0.41
AC239798.2-201ENST00000415338 UHRF1BP1LA0JNW5 1464 aa17.59■□□□□ 0.41
AC239798.2-201ENST00000415338 PDE3AQ14432 1141 aa17.59■□□□□ 0.41
AC239798.2-201ENST00000415338 FRAT2O75474 233 aaPredicted RBP17.59■□□□□ 0.41
AC239798.2-201ENST00000415338 ZMYM4Q5VZL5 1548 aa17.59■□□□□ 0.41
AC239798.2-201ENST00000415338 TMEM57Q8N5G2 664 aa17.59■□□□□ 0.41
AC239798.2-201ENST00000415338 NFKBIBQ15653 356 aa17.58■□□□□ 0.41
AC239798.2-201ENST00000415338 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
AC239798.2-201ENST00000415338 PHACTR3Q96KR7 559 aa17.58■□□□□ 0.4
AC239798.2-201ENST00000415338 PIK3C2GO75747 1445 aa17.57■□□□□ 0.4
AC239798.2-201ENST00000415338 TRIM27P14373 513 aa17.57■□□□□ 0.4
AC239798.2-201ENST00000415338 POLR1AO95602 1720 aaPredicted RBP17.57■□□□□ 0.4
AC239798.2-201ENST00000415338 ZNF521Q96K83 1311 aa17.57■□□□□ 0.4
AC239798.2-201ENST00000415338 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
AC239798.2-201ENST00000415338 C8orf34Q49A92 452 aa17.57■□□□□ 0.4
AC239798.2-201ENST00000415338 SULT6B1Q6IMI4 303 aa17.56■□□□□ 0.4
AC239798.2-201ENST00000415338 NUDT16Q96DE0 195 aaKnown RBP17.56■□□□□ 0.4
AC239798.2-201ENST00000415338 POGZQ7Z3K3 1410 aa17.56■□□□□ 0.4
AC239798.2-201ENST00000415338 WDR63Q8IWG1 891 aa17.56■□□□□ 0.4
AC239798.2-201ENST00000415338 MVPQ14764 893 aaKnown RBP17.55■□□□□ 0.4
AC239798.2-201ENST00000415338 PNNQ9H307 717 aaKnown RBP17.55■□□□□ 0.4
AC239798.2-201ENST00000415338 MADDQ8WXG6 1647 aa17.54■□□□□ 0.4
AC239798.2-201ENST00000415338 AMPHP49418 695 aa17.54■□□□□ 0.4
AC239798.2-201ENST00000415338 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
AC239798.2-201ENST00000415338 ATF7IPQ6VMQ6 1270 aa17.53■□□□□ 0.4
AC239798.2-201ENST00000415338 MCM10Q7L590 875 aa17.53■□□□□ 0.4
AC239798.2-201ENST00000415338 KDM2BQ8NHM5 1336 aa17.53■□□□□ 0.4
AC239798.2-201ENST00000415338 CLASP1Q7Z460 1538 aa17.53■□□□□ 0.4
AC239798.2-201ENST00000415338 SHROOM2Q13796 1616 aa17.53■□□□□ 0.4
AC239798.2-201ENST00000415338 AEBP1Q8IUX7 1158 aa17.52■□□□□ 0.4
AC239798.2-201ENST00000415338 POLR3AO14802 1390 aaPredicted RBP17.52■□□□□ 0.4
AC239798.2-201ENST00000415338 ANKRD36BQ8N2N9 1353 aa17.52■□□□□ 0.4
AC239798.2-201ENST00000415338 TSPYL6Q8N831 410 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms