RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 STK26Q9P289 416 aa22.85■■□□□ 1.25
LRRTM1-202ENST00000409148 ANKRD36BQ8N2N9 1353 aa22.84■■□□□ 1.25
LRRTM1-202ENST00000409148 NINLQ9Y2I6 1382 aa22.84■■□□□ 1.25
LRRTM1-202ENST00000409148 RCAN3Q9UKA8 241 aa22.83■■□□□ 1.25
LRRTM1-202ENST00000409148 RIMS2Q9UQ26 1411 aa22.83■■□□□ 1.24
LRRTM1-202ENST00000409148 CGNL1Q0VF96 1302 aa22.82■■□□□ 1.24
LRRTM1-202ENST00000409148 MORC1Q86VD1 984 aa22.82■■□□□ 1.24
LRRTM1-202ENST00000409148 POLR3AO14802 1390 aaPredicted RBP22.81■■□□□ 1.24
LRRTM1-202ENST00000409148 NSD2O96028 1365 aa22.81■■□□□ 1.24
LRRTM1-202ENST00000409148 ZMYM3Q14202 1370 aa22.81■■□□□ 1.24
LRRTM1-202ENST00000409148 SAFB2Q14151 953 aaKnown RBP eCLIP22.8■■□□□ 1.24
LRRTM1-202ENST00000409148 CDCA7LQ96GN5 454 aa22.8■■□□□ 1.24
LRRTM1-202ENST00000409148 POGKQ9P215 609 aa22.8■■□□□ 1.24
LRRTM1-202ENST00000409148 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
LRRTM1-202ENST00000409148 CABP2Q9NPB3 220 aa22.79■■□□□ 1.24
LRRTM1-202ENST00000409148 ATAD2Q6PL18 1390 aa22.79■■□□□ 1.24
LRRTM1-202ENST00000409148 RRP1P56182 461 aaKnown RBP22.79■■□□□ 1.24
LRRTM1-202ENST00000409148 PRAM1Q96QH2 718 aa22.79■■□□□ 1.24
LRRTM1-202ENST00000409148 DLC1Q96QB1 1528 aa22.78■■□□□ 1.24
LRRTM1-202ENST00000409148 B4GALNT3Q6L9W6 998 aa22.78■■□□□ 1.24
LRRTM1-202ENST00000409148 SETD1AO15047 1707 aaKnown RBP22.77■■□□□ 1.24
LRRTM1-202ENST00000409148 SRPK2P78362 688 aaKnown RBP22.77■■□□□ 1.24
LRRTM1-202ENST00000409148 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.76■■□□□ 1.23
LRRTM1-202ENST00000409148 PLEKHH1Q9ULM0 1364 aa22.76■■□□□ 1.23
LRRTM1-202ENST00000409148 MINK1Q8N4C8 1332 aaPredicted RBP22.74■■□□□ 1.23
LRRTM1-202ENST00000409148 ZNF521Q96K83 1311 aa22.73■■□□□ 1.23
LRRTM1-202ENST00000409148 NGEFQ8N5V2 710 aa22.73■■□□□ 1.23
LRRTM1-202ENST00000409148 RBM19Q9Y4C8 960 aaKnown RBP22.72■■□□□ 1.23
LRRTM1-202ENST00000409148 TNRQ92752 1358 aa22.72■■□□□ 1.23
LRRTM1-202ENST00000409148 SHPRHQ149N8 1683 aa22.72■■□□□ 1.23
LRRTM1-202ENST00000409148 A0A1W2PP64 1363 aa22.72■■□□□ 1.23
LRRTM1-202ENST00000409148 ABCC11Q96J66 1382 aa22.71■■□□□ 1.23
LRRTM1-202ENST00000409148 NRXN3Q9Y4C0 1643 aa22.71■■□□□ 1.23
LRRTM1-202ENST00000409148 HDGFP51858 240 aaKnown RBP22.7■■□□□ 1.23
LRRTM1-202ENST00000409148 GOLGA2Q08379 1002 aa22.7■■□□□ 1.23
LRRTM1-202ENST00000409148 TERF2IPQ9NYB0 399 aa22.7■■□□□ 1.23
LRRTM1-202ENST00000409148 CCDC146Q8IYE0 955 aa22.7■■□□□ 1.22
LRRTM1-202ENST00000409148 CCDC136Q96JN2 1154 aa22.69■■□□□ 1.22
LRRTM1-202ENST00000409148 TNNT2P45379 298 aaPredicted RBP22.69■■□□□ 1.22
LRRTM1-202ENST00000409148 CFAP53Q96M91 514 aa22.69■■□□□ 1.22
LRRTM1-202ENST00000409148 APAF1O14727 1248 aa22.67■■□□□ 1.22
LRRTM1-202ENST00000409148 ANKRD26Q9UPS8 1709 aa22.67■■□□□ 1.22
LRRTM1-202ENST00000409148 CDK19Q9BWU1 502 aa22.66■■□□□ 1.22
LRRTM1-202ENST00000409148 UBR1Q8IWV7 1749 aa22.66■■□□□ 1.22
LRRTM1-202ENST00000409148 DUSP27Q5VZP5 1158 aa22.66■■□□□ 1.22
LRRTM1-202ENST00000409148 MED14O60244 1454 aa22.64■■□□□ 1.22
LRRTM1-202ENST00000409148 MTHFSP49914 203 aa22.64■■□□□ 1.22
LRRTM1-202ENST00000409148 KNDC1Q76NI1 1749 aa22.64■■□□□ 1.22
LRRTM1-202ENST00000409148 CD163L1Q9NR16 1453 aa22.64■■□□□ 1.22
LRRTM1-202ENST00000409148 HDGFL2Q7Z4V5 671 aaPredicted RBP22.64■■□□□ 1.21
LRRTM1-202ENST00000409148 SLFN5Q08AF3 891 aa22.63■■□□□ 1.21
LRRTM1-202ENST00000409148 TMEM2Q9UHN6 1383 aa22.61■■□□□ 1.21
LRRTM1-202ENST00000409148 WAPLQ7Z5K2 1190 aa22.6■■□□□ 1.21
LRRTM1-202ENST00000409148 NLRP1Q9C000 1473 aa22.6■■□□□ 1.21
LRRTM1-202ENST00000409148 TRMT2AQ8IZ69 625 aaKnown RBP22.6■■□□□ 1.21
LRRTM1-202ENST00000409148 EXOC6Q8TAG9 804 aa22.6■■□□□ 1.21
LRRTM1-202ENST00000409148 METP08581 1390 aa22.59■■□□□ 1.21
LRRTM1-202ENST00000409148 KIF20BQ96Q89 1820 aa22.59■■□□□ 1.21
LRRTM1-202ENST00000409148 ATP7BP35670 1465 aa22.59■■□□□ 1.21
LRRTM1-202ENST00000409148 RUNDC1Q96C34 613 aa22.59■■□□□ 1.21
LRRTM1-202ENST00000409148 E9PSI1 815 aa22.58■■□□□ 1.21
LRRTM1-202ENST00000409148 TECPR2O15040 1411 aa22.58■■□□□ 1.21
LRRTM1-202ENST00000409148 FAM135BQ49AJ0 1406 aa22.58■■□□□ 1.21
LRRTM1-202ENST00000409148 CPS1P31327 1500 aa22.57■■□□□ 1.2
LRRTM1-202ENST00000409148 SIRT1Q96EB6 747 aa22.57■■□□□ 1.2
LRRTM1-202ENST00000409148 CABP1Q9NZU7 370 aa22.57■■□□□ 1.2
LRRTM1-202ENST00000409148 NKTRP30414 1462 aaKnown RBP22.57■■□□□ 1.2
LRRTM1-202ENST00000409148 IQSEC2Q5JU85 1478 aa22.57■■□□□ 1.2
LRRTM1-202ENST00000409148 GGNBP2Q9H3C7 697 aa22.57■■□□□ 1.2
LRRTM1-202ENST00000409148 FYB1O15117 783 aa22.55■■□□□ 1.2
LRRTM1-202ENST00000409148 PLIN1O60240 522 aa22.54■■□□□ 1.2
LRRTM1-202ENST00000409148 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.54■■□□□ 1.2
LRRTM1-202ENST00000409148 WASLO00401 505 aaPredicted RBP22.53■■□□□ 1.2
LRRTM1-202ENST00000409148 C3P01024 1663 aa22.53■■□□□ 1.2
LRRTM1-202ENST00000409148 WWC1Q8IX03 1113 aa22.52■■□□□ 1.2
LRRTM1-202ENST00000409148 FER1L4A9Z1Z3 1794 aa22.51■■□□□ 1.19
LRRTM1-202ENST00000409148 MSH5O43196 834 aa22.51■■□□□ 1.19
LRRTM1-202ENST00000409148 TXNDC2Q86VQ3 553 aa22.51■■□□□ 1.19
LRRTM1-202ENST00000409148 PLEKHG1Q9ULL1 1385 aa22.51■■□□□ 1.19
LRRTM1-202ENST00000409148 NCBP3Q53F19 620 aaKnown RBP22.51■■□□□ 1.19
LRRTM1-202ENST00000409148 TCP11L2Q8N4U5 519 aa22.51■■□□□ 1.19
LRRTM1-202ENST00000409148 SPINK5Q9NQ38 1064 aaPredicted RBP22.51■■□□□ 1.19
LRRTM1-202ENST00000409148 COL3A1P02461 1466 aaPredicted RBP22.5■■□□□ 1.19
LRRTM1-202ENST00000409148 U2AF1L5P0DN76 240 aaPredicted RBP22.49■■□□□ 1.19
LRRTM1-202ENST00000409148 U2AF1Q01081 240 aaKnown RBP eCLIP22.49■■□□□ 1.19
LRRTM1-202ENST00000409148 ADAMTS13Q76LX8 1427 aa22.49■■□□□ 1.19
LRRTM1-202ENST00000409148 PPIP5K1Q6PFW1 1433 aa22.48■■□□□ 1.19
LRRTM1-202ENST00000409148 CRBNQ96SW2 442 aa22.48■■□□□ 1.19
LRRTM1-202ENST00000409148 ADGRB2O60241 1585 aa22.48■■□□□ 1.19
LRRTM1-202ENST00000409148 CCDC27Q2M243 656 aa22.48■■□□□ 1.19
LRRTM1-202ENST00000409148 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
LRRTM1-202ENST00000409148 CPSF1Q10570 1443 aaKnown RBP22.47■■□□□ 1.19
LRRTM1-202ENST00000409148 EDC4Q6P2E9 1401 aaKnown RBP22.47■■□□□ 1.19
LRRTM1-202ENST00000409148 CDC42BPGQ6DT37 1551 aa22.46■■□□□ 1.19
LRRTM1-202ENST00000409148 CEBPAP49715 358 aaPredicted RBP22.46■■□□□ 1.19
LRRTM1-202ENST00000409148 WDR63Q8IWG1 891 aa22.46■■□□□ 1.19
LRRTM1-202ENST00000409148 DMRT2Q9Y5R5 561 aa22.46■■□□□ 1.19
LRRTM1-202ENST00000409148 SLIT1O75093 1534 aa22.45■■□□□ 1.18
LRRTM1-202ENST00000409148 NEUROD2Q15784 382 aa22.45■■□□□ 1.18
LRRTM1-202ENST00000409148 EID1Q9Y6B2 187 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms