RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 USP21Q9UK80 565 aa13.94□□□□□ -0.18
NIF3L1-203ENST00000409129 AMOTL2Q9Y2J4 779 aa13.94□□□□□ -0.18
NIF3L1-203ENST00000409129 ATRNO75882 1429 aa13.93□□□□□ -0.18
NIF3L1-203ENST00000409129 LAMC1P11047 1609 aa13.93□□□□□ -0.18
NIF3L1-203ENST00000409129 ZNF326Q5BKZ1 582 aaKnown RBP13.92□□□□□ -0.18
NIF3L1-203ENST00000409129 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.18
NIF3L1-203ENST00000409129 SLC4A2P04920 1241 aa13.9□□□□□ -0.18
NIF3L1-203ENST00000409129 TRPC5Q9UL62 973 aaPredicted RBP13.9□□□□□ -0.18
NIF3L1-203ENST00000409129 DEFB132Q7Z7B7 95 aa13.89□□□□□ -0.19
NIF3L1-203ENST00000409129 SPHKAPQ2M3C7 1700 aa13.88□□□□□ -0.19
NIF3L1-203ENST00000409129 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
NIF3L1-203ENST00000409129 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
NIF3L1-203ENST00000409129 RRBP1Q9P2E9 1410 aaKnown RBP13.88□□□□□ -0.19
NIF3L1-203ENST00000409129 GLI3P10071 1580 aa13.88□□□□□ -0.19
NIF3L1-203ENST00000409129 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.87□□□□□ -0.19
NIF3L1-203ENST00000409129 ADGRL3Q9HAR2 1447 aa13.87□□□□□ -0.19
NIF3L1-203ENST00000409129 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
NIF3L1-203ENST00000409129 METP08581 1390 aa13.86□□□□□ -0.19
NIF3L1-203ENST00000409129 FNBP4Q8N3X1 1017 aaPredicted RBP13.86□□□□□ -0.19
NIF3L1-203ENST00000409129 NAIPQ13075 1403 aa13.86□□□□□ -0.19
NIF3L1-203ENST00000409129 PTCH1Q13635 1447 aa13.85□□□□□ -0.19
NIF3L1-203ENST00000409129 C1orf167Q5SNV9 1468 aa13.85□□□□□ -0.19
NIF3L1-203ENST00000409129 BLMP54132 1417 aaPredicted RBP13.84□□□□□ -0.19
NIF3L1-203ENST00000409129 PSDA5PKW4 1024 aaPredicted RBP13.84□□□□□ -0.19
NIF3L1-203ENST00000409129 CCDC125Q86Z20 511 aa13.84□□□□□ -0.19
NIF3L1-203ENST00000409129 CLTCL1P53675 1640 aa13.83□□□□□ -0.2
NIF3L1-203ENST00000409129 MYOM2P54296 1465 aa13.82□□□□□ -0.2
NIF3L1-203ENST00000409129 NEXMIFQ5QGS0 1516 aa13.82□□□□□ -0.2
NIF3L1-203ENST00000409129 ORAI2Q96SN7 254 aa13.82□□□□□ -0.2
NIF3L1-203ENST00000409129 SOS2Q07890 1332 aaPredicted RBP13.82□□□□□ -0.2
NIF3L1-203ENST00000409129 VGFO15240 615 aaPredicted RBP13.81□□□□□ -0.2
NIF3L1-203ENST00000409129 GJD4Q96KN9 370 aaPredicted RBP13.8□□□□□ -0.2
NIF3L1-203ENST00000409129 HFM1A2PYH4 1435 aa13.8□□□□□ -0.2
NIF3L1-203ENST00000409129 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
NIF3L1-203ENST00000409129 RPGRIP1LQ68CZ1 1315 aa13.79□□□□□ -0.2
NIF3L1-203ENST00000409129 KIF1BO60333 1816 aa13.78□□□□□ -0.2
NIF3L1-203ENST00000409129 HRCP23327 699 aa13.77□□□□□ -0.21
NIF3L1-203ENST00000409129 PLCH1Q4KWH8 1693 aa13.77□□□□□ -0.21
NIF3L1-203ENST00000409129 PXDNQ92626 1479 aa13.75□□□□□ -0.21
NIF3L1-203ENST00000409129 XPCQ01831 940 aaPredicted RBP13.75□□□□□ -0.21
NIF3L1-203ENST00000409129 ROBO2Q9HCK4 1378 aa13.74□□□□□ -0.21
NIF3L1-203ENST00000409129 USP32Q8NFA0 1604 aa13.74□□□□□ -0.21
NIF3L1-203ENST00000409129 SLIT2O94813 1529 aa13.73□□□□□ -0.21
NIF3L1-203ENST00000409129 RGPD1P0DJD0 1748 aa13.73□□□□□ -0.21
NIF3L1-203ENST00000409129 TNS1Q9HBL0 1735 aaKnown RBP13.73□□□□□ -0.21
NIF3L1-203ENST00000409129 SF3B2Q13435 895 aaKnown RBP13.72□□□□□ -0.21
NIF3L1-203ENST00000409129 ABCA3Q99758 1704 aa13.72□□□□□ -0.21
NIF3L1-203ENST00000409129 SEPT12Q8IYM1 358 aa13.71□□□□□ -0.21
NIF3L1-203ENST00000409129 PRAG1Q86YV5 1406 aa13.71□□□□□ -0.22
NIF3L1-203ENST00000409129 RGPD8O14715 1765 aaPredicted RBP13.71□□□□□ -0.22
NIF3L1-203ENST00000409129 NWD2Q9ULI1 1742 aa13.7□□□□□ -0.22
NIF3L1-203ENST00000409129 UNC5CLQ8IV45 518 aa13.7□□□□□ -0.22
NIF3L1-203ENST00000409129 YY1P25490 414 aa13.69□□□□□ -0.22
NIF3L1-203ENST00000409129 RGL3Q3MIN7 710 aa13.69□□□□□ -0.22
NIF3L1-203ENST00000409129 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
NIF3L1-203ENST00000409129 PPLO60437 1756 aa13.68□□□□□ -0.22
NIF3L1-203ENST00000409129 ADGRF5Q8IZF2 1346 aa13.68□□□□□ -0.22
NIF3L1-203ENST00000409129 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
NIF3L1-203ENST00000409129 R3HDM1Q15032 1099 aaKnown RBP13.68□□□□□ -0.22
NIF3L1-203ENST00000409129 NRAPQ86VF7 1730 aa13.67□□□□□ -0.22
NIF3L1-203ENST00000409129 CAMTA1Q9Y6Y1 1673 aa13.67□□□□□ -0.22
NIF3L1-203ENST00000409129 CDC42BPGQ6DT37 1551 aa13.66□□□□□ -0.22
NIF3L1-203ENST00000409129 FOXO3O43524 673 aa13.66□□□□□ -0.22
NIF3L1-203ENST00000409129 EN1Q05925 392 aaPredicted RBP13.66□□□□□ -0.22
NIF3L1-203ENST00000409129 ESCO1Q5FWF5 840 aa13.66□□□□□ -0.22
NIF3L1-203ENST00000409129 STK26Q9P289 416 aa13.66□□□□□ -0.22
NIF3L1-203ENST00000409129 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
NIF3L1-203ENST00000409129 SPATA31E1Q6ZUB1 1445 aa13.65□□□□□ -0.22
NIF3L1-203ENST00000409129 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
NIF3L1-203ENST00000409129 KRT27Q7Z3Y8 459 aa13.65□□□□□ -0.22
NIF3L1-203ENST00000409129 ANKRD30BQ9BXX2 1392 aa13.65□□□□□ -0.22
NIF3L1-203ENST00000409129 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
NIF3L1-203ENST00000409129 BAG6P46379 1132 aa13.64□□□□□ -0.23
NIF3L1-203ENST00000409129 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
NIF3L1-203ENST00000409129 WAPLQ7Z5K2 1190 aa13.64□□□□□ -0.23
NIF3L1-203ENST00000409129 LRPPRCP42704 1394 aaKnown RBP13.63□□□□□ -0.23
NIF3L1-203ENST00000409129 TMEM132EQ6IEE7 984 aa13.63□□□□□ -0.23
NIF3L1-203ENST00000409129 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
NIF3L1-203ENST00000409129 FMN2Q9NZ56 1722 aa13.62□□□□□ -0.23
NIF3L1-203ENST00000409129 ABCC11Q96J66 1382 aa13.62□□□□□ -0.23
NIF3L1-203ENST00000409129 CCDC9Q9Y3X0 531 aaKnown RBP13.62□□□□□ -0.23
NIF3L1-203ENST00000409129 TECPR2O15040 1411 aa13.62□□□□□ -0.23
NIF3L1-203ENST00000409129 NUP188Q5SRE5 1749 aa13.61□□□□□ -0.23
NIF3L1-203ENST00000409129 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
NIF3L1-203ENST00000409129 RREB1Q92766 1687 aa13.6□□□□□ -0.23
NIF3L1-203ENST00000409129 A0A0G2JS52 829 aa13.6□□□□□ -0.23
NIF3L1-203ENST00000409129 PIK3C2GO75747 1445 aa13.6□□□□□ -0.23
NIF3L1-203ENST00000409129 MYT1Q01538 1121 aa13.6□□□□□ -0.23
NIF3L1-203ENST00000409129 VPS72Q15906 364 aa13.6□□□□□ -0.23
NIF3L1-203ENST00000409129 CABLES1Q8TDN4 633 aa13.6□□□□□ -0.23
NIF3L1-203ENST00000409129 IFT172Q9UG01 1749 aa13.6□□□□□ -0.23
NIF3L1-203ENST00000409129 PLEKHH1Q9ULM0 1364 aa13.59□□□□□ -0.23
NIF3L1-203ENST00000409129 ONECUT3O60422 494 aaPredicted RBP13.59□□□□□ -0.23
NIF3L1-203ENST00000409129 SIRT1Q96EB6 747 aa13.59□□□□□ -0.23
NIF3L1-203ENST00000409129 C14orf93Q9H972 538 aaKnown RBP13.59□□□□□ -0.23
NIF3L1-203ENST00000409129 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
NIF3L1-203ENST00000409129 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.24
NIF3L1-203ENST00000409129 EZH2Q15910 746 aaKnown RBP13.58□□□□□ -0.24
NIF3L1-203ENST00000409129 THSD7AQ9UPZ6 1657 aa13.57□□□□□ -0.24
NIF3L1-203ENST00000409129 FAM98CQ17RN3 349 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms