RNA–Protein interactions for RNA: ENST00000408671.3

MIR1249-201, Transcript of microRNA 1249, humanhuman

BASIC

Gene MIR1249, Length 66 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR1249-201ENST00000408671 RALGAPBQ86X10 1494 aa17.62■□□□□ 0.41
MIR1249-201ENST00000408671 ROCK1Q13464 1354 aa17.61■□□□□ 0.41
MIR1249-201ENST00000408671 ROBO2Q9HCK4 1378 aa17.61■□□□□ 0.41
MIR1249-201ENST00000408671 SLIT2O94813 1529 aa17.61■□□□□ 0.41
MIR1249-201ENST00000408671 CDC42BPGQ6DT37 1551 aa17.61■□□□□ 0.41
MIR1249-201ENST00000408671 CLTCL1P53675 1640 aa17.61■□□□□ 0.41
MIR1249-201ENST00000408671 APLP2Q06481 763 aa17.6■□□□□ 0.41
MIR1249-201ENST00000408671 KIF1BO60333 1816 aa17.59■□□□□ 0.41
MIR1249-201ENST00000408671 DEFB132Q7Z7B7 95 aa17.59■□□□□ 0.41
MIR1249-201ENST00000408671 NUP155O75694 1391 aa17.58■□□□□ 0.4
MIR1249-201ENST00000408671 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
MIR1249-201ENST00000408671 NPHP3Q7Z494 1330 aa17.57■□□□□ 0.4
MIR1249-201ENST00000408671 LOC105371045A0A1W2PR82 267 aa17.57■□□□□ 0.4
MIR1249-201ENST00000408671 USP32Q8NFA0 1604 aa17.57■□□□□ 0.4
MIR1249-201ENST00000408671 ZNF326Q5BKZ1 582 aaKnown RBP17.56■□□□□ 0.4
MIR1249-201ENST00000408671 HFM1A2PYH4 1435 aa17.55■□□□□ 0.4
MIR1249-201ENST00000408671 NWD2Q9ULI1 1742 aa17.55■□□□□ 0.4
MIR1249-201ENST00000408671 UNC5CLQ8IV45 518 aa17.54■□□□□ 0.4
MIR1249-201ENST00000408671 PLCH1Q4KWH8 1693 aa17.53■□□□□ 0.4
MIR1249-201ENST00000408671 HRCP23327 699 aa17.51■□□□□ 0.39
MIR1249-201ENST00000408671 SF3B2Q13435 895 aaKnown RBP17.5■□□□□ 0.39
MIR1249-201ENST00000408671 PPLO60437 1756 aa17.5■□□□□ 0.39
MIR1249-201ENST00000408671 ABCA3Q99758 1704 aa17.5■□□□□ 0.39
MIR1249-201ENST00000408671 KIF1AQ12756 1690 aa17.49■□□□□ 0.39
MIR1249-201ENST00000408671 ONECUT3O60422 494 aaPredicted RBP17.49■□□□□ 0.39
MIR1249-201ENST00000408671 RGPD1P0DJD0 1748 aa17.48■□□□□ 0.39
MIR1249-201ENST00000408671 ESCO1Q5FWF5 840 aa17.48■□□□□ 0.39
MIR1249-201ENST00000408671 SEPT12Q8IYM1 358 aa17.48■□□□□ 0.39
MIR1249-201ENST00000408671 LRPPRCP42704 1394 aaKnown RBP17.48■□□□□ 0.39
MIR1249-201ENST00000408671 FMN2Q9NZ56 1722 aa17.47■□□□□ 0.39
MIR1249-201ENST00000408671 PSDA5PKW4 1024 aaPredicted RBP17.47■□□□□ 0.39
MIR1249-201ENST00000408671 FOXO3O43524 673 aa17.47■□□□□ 0.39
MIR1249-201ENST00000408671 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.39
MIR1249-201ENST00000408671 VPS72Q15906 364 aa17.46■□□□□ 0.39
MIR1249-201ENST00000408671 SPATA31A3Q5VYP0 1347 aa17.46■□□□□ 0.38
MIR1249-201ENST00000408671 NRAPQ86VF7 1730 aa17.45■□□□□ 0.38
MIR1249-201ENST00000408671 TNS1Q9HBL0 1735 aaKnown RBP17.44■□□□□ 0.38
MIR1249-201ENST00000408671 VGFO15240 615 aaPredicted RBP17.44■□□□□ 0.38
MIR1249-201ENST00000408671 TECPR2O15040 1411 aa17.44■□□□□ 0.38
MIR1249-201ENST00000408671 NAIPQ13075 1403 aa17.44■□□□□ 0.38
MIR1249-201ENST00000408671 KNDC1Q76NI1 1749 aa17.44■□□□□ 0.38
MIR1249-201ENST00000408671 BAG6P46379 1132 aa17.43■□□□□ 0.38
MIR1249-201ENST00000408671 KRT27Q7Z3Y8 459 aa17.43■□□□□ 0.38
MIR1249-201ENST00000408671 CCDC144AA2RUR9 1427 aa17.43■□□□□ 0.38
MIR1249-201ENST00000408671 RGPD8O14715 1765 aaPredicted RBP17.41■□□□□ 0.38
MIR1249-201ENST00000408671 DISP2A7MBM2 1401 aa17.41■□□□□ 0.38
MIR1249-201ENST00000408671 TNS3Q68CZ2 1445 aa17.39■□□□□ 0.38
MIR1249-201ENST00000408671 RPGRIP1LQ68CZ1 1315 aa17.39■□□□□ 0.37
MIR1249-201ENST00000408671 IFT172Q9UG01 1749 aa17.38■□□□□ 0.37
MIR1249-201ENST00000408671 THSD7AQ9UPZ6 1657 aa17.36■□□□□ 0.37
MIR1249-201ENST00000408671 EN1Q05925 392 aaPredicted RBP17.35■□□□□ 0.37
MIR1249-201ENST00000408671 NUTM2FA1L443 756 aa17.34■□□□□ 0.37
MIR1249-201ENST00000408671 R3HDM1Q15032 1099 aaKnown RBP17.34■□□□□ 0.37
MIR1249-201ENST00000408671 ADGRB2O60241 1585 aa17.33■□□□□ 0.37
MIR1249-201ENST00000408671 KRT28Q7Z3Y7 464 aa17.33■□□□□ 0.36
MIR1249-201ENST00000408671 RREB1Q92766 1687 aa17.32■□□□□ 0.36
MIR1249-201ENST00000408671 SBNO1A3KN83 1393 aa17.32■□□□□ 0.36
MIR1249-201ENST00000408671 PLEKHH1Q9ULM0 1364 aa17.32■□□□□ 0.36
MIR1249-201ENST00000408671 COL14A1Q05707 1796 aaKnown RBP17.32■□□□□ 0.36
MIR1249-201ENST00000408671 NRXN1Q9ULB1 1477 aa17.31■□□□□ 0.36
MIR1249-201ENST00000408671 ABCC11Q96J66 1382 aa17.31■□□□□ 0.36
MIR1249-201ENST00000408671 YY1P25490 414 aa17.31■□□□□ 0.36
MIR1249-201ENST00000408671 WAPLQ7Z5K2 1190 aa17.31■□□□□ 0.36
MIR1249-201ENST00000408671 CABLES1Q8TDN4 633 aa17.31■□□□□ 0.36
MIR1249-201ENST00000408671 CCDC9Q9Y3X0 531 aaKnown RBP17.31■□□□□ 0.36
MIR1249-201ENST00000408671 TRPM3Q9HCF6 1732 aaPredicted RBP17.3■□□□□ 0.36
MIR1249-201ENST00000408671 CRYBG1Q9Y4K1 1723 aa17.3■□□□□ 0.36
MIR1249-201ENST00000408671 ARHGEF10O15013 1369 aa17.29■□□□□ 0.36
MIR1249-201ENST00000408671 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
MIR1249-201ENST00000408671 NUP188Q5SRE5 1749 aa17.29■□□□□ 0.36
MIR1249-201ENST00000408671 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
MIR1249-201ENST00000408671 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
MIR1249-201ENST00000408671 FAM83GA6ND36 823 aa17.28■□□□□ 0.36
MIR1249-201ENST00000408671 HAP1P54257 671 aaPredicted RBP17.28■□□□□ 0.36
MIR1249-201ENST00000408671 A0A0G2JS52 829 aa17.26■□□□□ 0.35
MIR1249-201ENST00000408671 ITGAEP38570 1179 aa17.26■□□□□ 0.35
MIR1249-201ENST00000408671 MYT1Q01538 1121 aa17.26■□□□□ 0.35
MIR1249-201ENST00000408671 PSME1Q06323 249 aa17.26■□□□□ 0.35
MIR1249-201ENST00000408671 EZH2Q15910 746 aaKnown RBP17.26■□□□□ 0.35
MIR1249-201ENST00000408671 PHF8Q9UPP1 1060 aa17.26■□□□□ 0.35
MIR1249-201ENST00000408671 PARD3Q8TEW0 1356 aa17.26■□□□□ 0.35
MIR1249-201ENST00000408671 ADGRF5Q8IZF2 1346 aa17.25■□□□□ 0.35
MIR1249-201ENST00000408671 CAMKK2Q96RR4 588 aa17.25■□□□□ 0.35
MIR1249-201ENST00000408671 PIK3C2GO75747 1445 aa17.24■□□□□ 0.35
MIR1249-201ENST00000408671 YTHDC2Q9H6S0 1430 aaKnown RBP17.24■□□□□ 0.35
MIR1249-201ENST00000408671 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
MIR1249-201ENST00000408671 STK26Q9P289 416 aa17.24■□□□□ 0.35
MIR1249-201ENST00000408671 SPATA31A5Q5VU36 1347 aa17.23■□□□□ 0.35
MIR1249-201ENST00000408671 SPATA31A7Q8IWB4 1347 aa17.23■□□□□ 0.35
MIR1249-201ENST00000408671 BTG4Q9NY30 223 aa17.23■□□□□ 0.35
MIR1249-201ENST00000408671 SPATA31E1Q6ZUB1 1445 aa17.22■□□□□ 0.35
MIR1249-201ENST00000408671 SIRT1Q96EB6 747 aa17.22■□□□□ 0.35
MIR1249-201ENST00000408671 ANKRD30BQ9BXX2 1392 aa17.2■□□□□ 0.34
MIR1249-201ENST00000408671 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
MIR1249-201ENST00000408671 TMEM132EQ6IEE7 984 aa17.19■□□□□ 0.34
MIR1249-201ENST00000408671 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
MIR1249-201ENST00000408671 UTRNP46939 3433 aa17.18■□□□□ 0.34
MIR1249-201ENST00000408671 NINLQ9Y2I6 1382 aa17.18■□□□□ 0.34
MIR1249-201ENST00000408671 PLEKHG5O94827 1062 aa17.18■□□□□ 0.34
MIR1249-201ENST00000408671 LMOD2Q6P5Q4 547 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms