RNA–Protein interactions for RNA: ENST00000407439.7

MRE11-204, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2 BASIC

Gene MRE11, Length 2,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-204ENST00000407439 NINLQ9Y2I6 1382 aa8.53□□□□□ -1.04
MRE11-204ENST00000407439 MYO5BQ9ULV0 1848 aa8.53□□□□□ -1.04
MRE11-204ENST00000407439 ADAMTS8Q9UP79 889 aa8.53□□□□□ -1.04
MRE11-204ENST00000407439 EVC2Q86UK5 1308 aa8.53□□□□□ -1.04
MRE11-204ENST00000407439 WDR43Q15061 677 aaKnown RBP eCLIP8.52□□□□□ -1.05
MRE11-204ENST00000407439 NSD3Q9BZ95 1437 aa8.52□□□□□ -1.05
MRE11-204ENST00000407439 FBXO31Q5XUX0 539 aaPredicted RBP8.52□□□□□ -1.05
MRE11-204ENST00000407439 PTPRMP28827 1452 aa8.52□□□□□ -1.05
MRE11-204ENST00000407439 POLR3AO14802 1390 aaPredicted RBP8.51□□□□□ -1.05
MRE11-204ENST00000407439 ANKRD36BQ8N2N9 1353 aa8.51□□□□□ -1.05
MRE11-204ENST00000407439 CLTCQ00610 1675 aaKnown RBP8.51□□□□□ -1.05
MRE11-204ENST00000407439 NSD2O96028 1365 aa8.51□□□□□ -1.05
MRE11-204ENST00000407439 NUTM2DQ5VT03 806 aaPredicted RBP8.51□□□□□ -1.05
MRE11-204ENST00000407439 A2ML1A8K2U0 1454 aa8.51□□□□□ -1.05
MRE11-204ENST00000407439 YTHDC2Q9H6S0 1430 aaKnown RBP8.5□□□□□ -1.05
MRE11-204ENST00000407439 ZNF521Q96K83 1311 aa8.5□□□□□ -1.05
MRE11-204ENST00000407439 RCAN3Q9UKA8 241 aa8.5□□□□□ -1.05
MRE11-204ENST00000407439 CGNL1Q0VF96 1302 aa8.5□□□□□ -1.05
MRE11-204ENST00000407439 SENP3-EIF4A1A0A087X0R7 540 aa8.5□□□□□ -1.05
MRE11-204ENST00000407439 RRP1P56182 461 aaKnown RBP8.5□□□□□ -1.05
MRE11-204ENST00000407439 SLC12A5Q9H2X9 1139 aa8.5□□□□□ -1.05
MRE11-204ENST00000407439 ALKQ9UM73 1620 aa8.5□□□□□ -1.05
MRE11-204ENST00000407439 PLEKHH1Q9ULM0 1364 aa8.49□□□□□ -1.05
MRE11-204ENST00000407439 NGEFQ8N5V2 710 aa8.49□□□□□ -1.05
MRE11-204ENST00000407439 DLC1Q96QB1 1528 aa8.49□□□□□ -1.05
MRE11-204ENST00000407439 ATAD2Q6PL18 1390 aa8.49□□□□□ -1.05
MRE11-204ENST00000407439 CDCA7LQ96GN5 454 aa8.48□□□□□ -1.05
MRE11-204ENST00000407439 SALL2Q9Y467 1007 aaPredicted RBP8.48□□□□□ -1.05
MRE11-204ENST00000407439 B4GALNT3Q6L9W6 998 aa8.48□□□□□ -1.05
MRE11-204ENST00000407439 STAG3Q9UJ98 1225 aa8.47□□□□□ -1.05
MRE11-204ENST00000407439 ABCC11Q96J66 1382 aa8.47□□□□□ -1.05
MRE11-204ENST00000407439 RIMS2Q9UQ26 1411 aa8.47□□□□□ -1.05
MRE11-204ENST00000407439 SETD1AO15047 1707 aaKnown RBP8.47□□□□□ -1.05
MRE11-204ENST00000407439 MORC1Q86VD1 984 aa8.46□□□□□ -1.06
MRE11-204ENST00000407439 A0A1W2PP64 1363 aa8.46□□□□□ -1.06
MRE11-204ENST00000407439 ZMYM3Q14202 1370 aa8.46□□□□□ -1.06
MRE11-204ENST00000407439 MED14O60244 1454 aa8.46□□□□□ -1.06
MRE11-204ENST00000407439 DUSP27Q5VZP5 1158 aa8.46□□□□□ -1.06
MRE11-204ENST00000407439 PRAM1Q96QH2 718 aa8.46□□□□□ -1.06
MRE11-204ENST00000407439 RBM19Q9Y4C8 960 aaKnown RBP8.46□□□□□ -1.06
MRE11-204ENST00000407439 GOLGA2Q08379 1002 aa8.45□□□□□ -1.06
MRE11-204ENST00000407439 CABP2Q9NPB3 220 aa8.45□□□□□ -1.06
MRE11-204ENST00000407439 STK26Q9P289 416 aa8.45□□□□□ -1.06
MRE11-204ENST00000407439 SHPRHQ149N8 1683 aa8.45□□□□□ -1.06
MRE11-204ENST00000407439 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.45□□□□□ -1.06
MRE11-204ENST00000407439 CCDC136Q96JN2 1154 aa8.45□□□□□ -1.06
MRE11-204ENST00000407439 CD163L1Q9NR16 1453 aa8.44□□□□□ -1.06
MRE11-204ENST00000407439 TRMT2AQ8IZ69 625 aaKnown RBP8.44□□□□□ -1.06
MRE11-204ENST00000407439 NRXN3Q9Y4C0 1643 aa8.44□□□□□ -1.06
MRE11-204ENST00000407439 NLRP1Q9C000 1473 aa8.44□□□□□ -1.06
MRE11-204ENST00000407439 SRPK2P78362 688 aaKnown RBP8.44□□□□□ -1.06
MRE11-204ENST00000407439 SAFB2Q14151 953 aaKnown RBP eCLIP8.44□□□□□ -1.06
MRE11-204ENST00000407439 MLECQ14165 292 aa8.44□□□□□ -1.06
MRE11-204ENST00000407439 ESF1Q9H501 851 aaKnown RBP8.44□□□□□ -1.06
MRE11-204ENST00000407439 POGKQ9P215 609 aa8.44□□□□□ -1.06
MRE11-204ENST00000407439 TERF2IPQ9NYB0 399 aa8.43□□□□□ -1.06
MRE11-204ENST00000407439 TECPR2O15040 1411 aa8.43□□□□□ -1.06
MRE11-204ENST00000407439 IQSEC2Q5JU85 1478 aa8.43□□□□□ -1.06
MRE11-204ENST00000407439 TNRQ92752 1358 aa8.43□□□□□ -1.06
MRE11-204ENST00000407439 APAF1O14727 1248 aa8.43□□□□□ -1.06
MRE11-204ENST00000407439 SLFN5Q08AF3 891 aa8.43□□□□□ -1.06
MRE11-204ENST00000407439 MINK1Q8N4C8 1332 aaPredicted RBP8.43□□□□□ -1.06
MRE11-204ENST00000407439 ATP7BP35670 1465 aa8.42□□□□□ -1.06
MRE11-204ENST00000407439 E9PSI1 815 aa8.42□□□□□ -1.06
MRE11-204ENST00000407439 CCDC146Q8IYE0 955 aa8.42□□□□□ -1.06
MRE11-204ENST00000407439 CFAP53Q96M91 514 aa8.42□□□□□ -1.06
MRE11-204ENST00000407439 NKTRP30414 1462 aaKnown RBP8.42□□□□□ -1.06
MRE11-204ENST00000407439 FAM135BQ49AJ0 1406 aa8.41□□□□□ -1.06
MRE11-204ENST00000407439 KNDC1Q76NI1 1749 aa8.41□□□□□ -1.06
MRE11-204ENST00000407439 MTHFSP49914 203 aa8.41□□□□□ -1.06
MRE11-204ENST00000407439 HDGFP51858 240 aaKnown RBP8.41□□□□□ -1.06
MRE11-204ENST00000407439 TMEM2Q9UHN6 1383 aa8.41□□□□□ -1.06
MRE11-204ENST00000407439 ANKRD26Q9UPS8 1709 aa8.41□□□□□ -1.06
MRE11-204ENST00000407439 EXOC6Q8TAG9 804 aa8.41□□□□□ -1.06
MRE11-204ENST00000407439 CPS1P31327 1500 aa8.4□□□□□ -1.06
MRE11-204ENST00000407439 SIRT1Q96EB6 747 aa8.4□□□□□ -1.06
MRE11-204ENST00000407439 CDK19Q9BWU1 502 aa8.4□□□□□ -1.06
MRE11-204ENST00000407439 UBR1Q8IWV7 1749 aa8.4□□□□□ -1.06
MRE11-204ENST00000407439 TNNT2P45379 298 aaPredicted RBP8.4□□□□□ -1.07
MRE11-204ENST00000407439 HDGFL2Q7Z4V5 671 aaPredicted RBP8.4□□□□□ -1.07
MRE11-204ENST00000407439 RUNDC1Q96C34 613 aa8.4□□□□□ -1.07
MRE11-204ENST00000407439 ATF5Q9Y2D1 282 aaPredicted RBP8.4□□□□□ -1.07
MRE11-204ENST00000407439 METP08581 1390 aa8.4□□□□□ -1.07
MRE11-204ENST00000407439 FYB1O15117 783 aa8.39□□□□□ -1.07
MRE11-204ENST00000407439 CCDC27Q2M243 656 aa8.39□□□□□ -1.07
MRE11-204ENST00000407439 COL3A1P02461 1466 aaPredicted RBP8.39□□□□□ -1.07
MRE11-204ENST00000407439 WWC1Q8IX03 1113 aa8.39□□□□□ -1.07
MRE11-204ENST00000407439 FANCIQ9NVI1 1328 aa8.39□□□□□ -1.07
MRE11-204ENST00000407439 ADGRB2O60241 1585 aa8.39□□□□□ -1.07
MRE11-204ENST00000407439 PNPLA6Q8IY17 1366 aa8.38□□□□□ -1.07
MRE11-204ENST00000407439 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.38□□□□□ -1.07
MRE11-204ENST00000407439 SPINK5Q9NQ38 1064 aaPredicted RBP8.38□□□□□ -1.07
MRE11-204ENST00000407439 CPSF1Q10570 1443 aaKnown RBP8.38□□□□□ -1.07
MRE11-204ENST00000407439 WAPLQ7Z5K2 1190 aa8.37□□□□□ -1.07
MRE11-204ENST00000407439 CABP1Q9NZU7 370 aa8.37□□□□□ -1.07
MRE11-204ENST00000407439 ADAMTS13Q76LX8 1427 aa8.37□□□□□ -1.07
MRE11-204ENST00000407439 PLEKHG1Q9ULL1 1385 aa8.37□□□□□ -1.07
MRE11-204ENST00000407439 PLIN1O60240 522 aa8.37□□□□□ -1.07
MRE11-204ENST00000407439 TCP11L2Q8N4U5 519 aa8.37□□□□□ -1.07
MRE11-204ENST00000407439 GGNBP2Q9H3C7 697 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms