RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 FKBP8Q14318 412 aa39.08■■■■□ 3.85
CSNK1E-205ENST00000405675 PRAM1Q96QH2 718 aa39.07■■■■□ 3.85
CSNK1E-205ENST00000405675 NPC1L1Q9UHC9 1359 aa39.07■■■■□ 3.84
CSNK1E-205ENST00000405675 ADAMTS13Q76LX8 1427 aa39.07■■■■□ 3.84
CSNK1E-205ENST00000405675 SENP3-EIF4A1A0A087X0R7 540 aa39.06■■■■□ 3.84
CSNK1E-205ENST00000405675 TULP4Q9NRJ4 1543 aa39.06■■■■□ 3.84
CSNK1E-205ENST00000405675 PPP2R1AP30153 589 aa39.03■■■■□ 3.84
CSNK1E-205ENST00000405675 POGKQ9P215 609 aa39.03■■■■□ 3.84
CSNK1E-205ENST00000405675 SETD1BQ9UPS6 1966 aaKnown RBP39.02■■■■□ 3.84
CSNK1E-205ENST00000405675 ABCC11Q96J66 1382 aa39.01■■■■□ 3.83
CSNK1E-205ENST00000405675 SLC12A5Q9H2X9 1139 aa39.01■■■■□ 3.83
CSNK1E-205ENST00000405675 ZNF142P52746 1687 aaPredicted RBP39■■■■□ 3.83
CSNK1E-205ENST00000405675 EVC2Q86UK5 1308 aa38.99■■■■□ 3.83
CSNK1E-205ENST00000405675 SLC26A8Q96RN1 970 aa38.99■■■■□ 3.83
CSNK1E-205ENST00000405675 NEFLP07196 543 aa38.98■■■■□ 3.83
CSNK1E-205ENST00000405675 DLC1Q96QB1 1528 aa38.97■■■■□ 3.83
CSNK1E-205ENST00000405675 WAPLQ7Z5K2 1190 aa38.96■■■■□ 3.83
CSNK1E-205ENST00000405675 MED14O60244 1454 aa38.96■■■■□ 3.83
CSNK1E-205ENST00000405675 MINK1Q8N4C8 1332 aaPredicted RBP38.95■■■■□ 3.83
CSNK1E-205ENST00000405675 PUS7Q96PZ0 661 aaKnown RBP38.94■■■■□ 3.82
CSNK1E-205ENST00000405675 PLEKHH1Q9ULM0 1364 aa38.92■■■■□ 3.82
CSNK1E-205ENST00000405675 CABP2Q9NPB3 220 aa38.92■■■■□ 3.82
CSNK1E-205ENST00000405675 NSD3Q9BZ95 1437 aa38.9■■■■□ 3.82
CSNK1E-205ENST00000405675 TBX22Q9Y458 520 aa38.88■■■■□ 3.81
CSNK1E-205ENST00000405675 ANKLE2Q86XL3 938 aa38.87■■■■□ 3.81
CSNK1E-205ENST00000405675 SMG6Q86US8 1419 aaKnown RBP38.87■■■■□ 3.81
CSNK1E-205ENST00000405675 TECPR2O15040 1411 aa38.86■■■■□ 3.81
CSNK1E-205ENST00000405675 BLMP54132 1417 aaPredicted RBP38.84■■■■□ 3.81
CSNK1E-205ENST00000405675 KNDC1Q76NI1 1749 aa38.84■■■■□ 3.81
CSNK1E-205ENST00000405675 INSRP06213 1382 aa38.83■■■■□ 3.81
CSNK1E-205ENST00000405675 SIRT1Q96EB6 747 aa38.83■■■■□ 3.81
CSNK1E-205ENST00000405675 PTPRUQ92729 1446 aa38.82■■■■□ 3.81
CSNK1E-205ENST00000405675 SRPK2P78362 688 aaKnown RBP38.81■■■■□ 3.8
CSNK1E-205ENST00000405675 FAM135BQ49AJ0 1406 aa38.8■■■■□ 3.8
CSNK1E-205ENST00000405675 CPS1P31327 1500 aa38.8■■■■□ 3.8
CSNK1E-205ENST00000405675 NUDCQ9Y266 331 aa38.8■■■■□ 3.8
CSNK1E-205ENST00000405675 ROBO2Q9HCK4 1378 aa38.8■■■■□ 3.8
CSNK1E-205ENST00000405675 KDM4FA0A1W2PPD8 638 aa38.78■■■■□ 3.8
CSNK1E-205ENST00000405675 ADAMTS8Q9UP79 889 aa38.78■■■■□ 3.8
CSNK1E-205ENST00000405675 DIP2AQ14689 1571 aa38.77■■■■□ 3.8
CSNK1E-205ENST00000405675 ANKRD36BQ8N2N9 1353 aa38.77■■■■□ 3.8
CSNK1E-205ENST00000405675 CDK19Q9BWU1 502 aa38.77■■■■□ 3.8
CSNK1E-205ENST00000405675 AMOTL2Q9Y2J4 779 aa38.76■■■■□ 3.8
CSNK1E-205ENST00000405675 IRX6P78412 446 aaPredicted RBP38.75■■■■□ 3.79
CSNK1E-205ENST00000405675 SALL2Q9Y467 1007 aaPredicted RBP38.75■■■■□ 3.79
CSNK1E-205ENST00000405675 USP32Q8NFA0 1604 aa38.74■■■■□ 3.79
CSNK1E-205ENST00000405675 WDR43Q15061 677 aaKnown RBP eCLIP38.69■■■■□ 3.78
CSNK1E-205ENST00000405675 ATAD2Q6PL18 1390 aa38.69■■■■□ 3.78
CSNK1E-205ENST00000405675 NINLQ9Y2I6 1382 aa38.69■■■■□ 3.78
CSNK1E-205ENST00000405675 MORC1Q86VD1 984 aa38.68■■■■□ 3.78
CSNK1E-205ENST00000405675 CGNL1Q0VF96 1302 aa38.68■■■■□ 3.78
CSNK1E-205ENST00000405675 A0A1W2PP64 1363 aa38.67■■■■□ 3.78
CSNK1E-205ENST00000405675 NCKAP5LQ9HCH0 1330 aa38.65■■■■□ 3.78
CSNK1E-205ENST00000405675 WASLO00401 505 aaPredicted RBP38.65■■■■□ 3.78
CSNK1E-205ENST00000405675 NPHP4O75161 1426 aaPredicted RBP38.62■■■■□ 3.77
CSNK1E-205ENST00000405675 CD163L1Q9NR16 1453 aa38.62■■■■□ 3.77
CSNK1E-205ENST00000405675 PIK3R4Q99570 1358 aa38.62■■■■□ 3.77
CSNK1E-205ENST00000405675 TNNT2P45379 298 aaPredicted RBP38.62■■■■□ 3.77
CSNK1E-205ENST00000405675 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.6■■■■□ 3.77
CSNK1E-205ENST00000405675 PTCH1Q13635 1447 aa38.59■■■■□ 3.77
CSNK1E-205ENST00000405675 KCNA6P17658 529 aa38.59■■■■□ 3.77
CSNK1E-205ENST00000405675 XRN1Q8IZH2 1706 aaKnown RBP38.59■■■■□ 3.77
CSNK1E-205ENST00000405675 POLR3AO14802 1390 aaPredicted RBP38.56■■■■□ 3.76
CSNK1E-205ENST00000405675 NSD2O96028 1365 aa38.56■■■■□ 3.76
CSNK1E-205ENST00000405675 PDE3BQ13370 1112 aa38.56■■■■□ 3.76
CSNK1E-205ENST00000405675 CABP1Q9NZU7 370 aa38.56■■■■□ 3.76
CSNK1E-205ENST00000405675 TERF2IPQ9NYB0 399 aa38.54■■■■□ 3.76
CSNK1E-205ENST00000405675 CDCA7LQ96GN5 454 aa38.54■■■■□ 3.76
CSNK1E-205ENST00000405675 RNF123Q5XPI4 1314 aa38.5■■■■□ 3.75
CSNK1E-205ENST00000405675 HSPA2P54652 639 aa38.5■■■■□ 3.75
CSNK1E-205ENST00000405675 NUDT16Q96DE0 195 aaKnown RBP38.5■■■■□ 3.75
CSNK1E-205ENST00000405675 ADGRB2O60241 1585 aa38.49■■■■□ 3.75
CSNK1E-205ENST00000405675 CHD2O14647 1828 aaKnown RBP38.49■■■■□ 3.75
CSNK1E-205ENST00000405675 CCDC146Q8IYE0 955 aa38.48■■■■□ 3.75
CSNK1E-205ENST00000405675 ERICH6BQ5W0A0 696 aa38.45■■■■□ 3.75
CSNK1E-205ENST00000405675 HDGFL2Q7Z4V5 671 aaPredicted RBP38.45■■■■□ 3.75
CSNK1E-205ENST00000405675 MTHFSP49914 203 aa38.45■■■■□ 3.75
CSNK1E-205ENST00000405675 GGNBP2Q9H3C7 697 aa38.45■■■■□ 3.75
CSNK1E-205ENST00000405675 PRR36Q9H6K5 1346 aa38.44■■■■□ 3.74
CSNK1E-205ENST00000405675 SHPRHQ149N8 1683 aa38.44■■■■□ 3.74
CSNK1E-205ENST00000405675 PPIP5K1Q6PFW1 1433 aa38.43■■■■□ 3.74
CSNK1E-205ENST00000405675 FYB1O15117 783 aa38.42■■■■□ 3.74
CSNK1E-205ENST00000405675 CCDC61Q9Y6R9 512 aa38.42■■■■□ 3.74
CSNK1E-205ENST00000405675 NUTM2FA1L443 756 aa38.41■■■■□ 3.74
CSNK1E-205ENST00000405675 ATP7BP35670 1465 aa38.41■■■■□ 3.74
CSNK1E-205ENST00000405675 ZNF521Q96K83 1311 aa38.38■■■■□ 3.73
CSNK1E-205ENST00000405675 PELP1Q8IZL8 1130 aaKnown RBP38.38■■■■□ 3.73
CSNK1E-205ENST00000405675 LMTK3Q96Q04 1460 aa38.37■■■■□ 3.73
CSNK1E-205ENST00000405675 RBM33Q96EV2 1170 aaKnown RBP38.36■■■■□ 3.73
CSNK1E-205ENST00000405675 APAF1O14727 1248 aa38.36■■■■□ 3.73
CSNK1E-205ENST00000405675 ANKRD26Q9UPS8 1709 aa38.35■■■■□ 3.73
CSNK1E-205ENST00000405675 RCAN3Q9UKA8 241 aa38.33■■■■□ 3.73
CSNK1E-205ENST00000405675 PPP4R2Q9NY27 417 aa38.33■■■■□ 3.73
CSNK1E-205ENST00000405675 CFAP53Q96M91 514 aa38.32■■■■□ 3.72
CSNK1E-205ENST00000405675 CPSF1Q10570 1443 aaKnown RBP38.31■■■■□ 3.72
CSNK1E-205ENST00000405675 KIF20BQ96Q89 1820 aa38.29■■■■□ 3.72
CSNK1E-205ENST00000405675 SUGP2Q8IX01 1082 aaKnown RBP eCLIP38.28■■■■□ 3.72
CSNK1E-205ENST00000405675 CDC42BPGQ6DT37 1551 aa38.27■■■■□ 3.72
CSNK1E-205ENST00000405675 NWD1Q149M9 1564 aa38.25■■■■□ 3.71
CSNK1E-205ENST00000405675 TOPAZ1Q8N9V7 1692 aa38.25■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms