RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 ATP1B4Q9UN42 357 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P7-201ENST00000400214 PREX2Q70Z35 1606 aa7.88□□□□□ -1.15
HMGB3P7-201ENST00000400214 MAP3K1Q13233 1512 aa7.88□□□□□ -1.15
HMGB3P7-201ENST00000400214 FANCAO15360 1455 aa7.87□□□□□ -1.15
HMGB3P7-201ENST00000400214 G3V3G9 751 aa7.87□□□□□ -1.15
HMGB3P7-201ENST00000400214 PPP1R37O75864 691 aa7.87□□□□□ -1.15
HMGB3P7-201ENST00000400214 PARP9Q8IXQ6 854 aa7.87□□□□□ -1.15
HMGB3P7-201ENST00000400214 TIAM1Q13009 1591 aa7.86□□□□□ -1.15
HMGB3P7-201ENST00000400214 FRMPD1Q5SYB0 1578 aa7.86□□□□□ -1.15
HMGB3P7-201ENST00000400214 BRD2P25440 801 aaKnown RBP7.86□□□□□ -1.15
HMGB3P7-201ENST00000400214 PCMTD1Q96MG8 357 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P7-201ENST00000400214 MFRPQ9BY79 579 aa7.86□□□□□ -1.15
HMGB3P7-201ENST00000400214 ZSWIM6Q9HCJ5 1215 aa7.86□□□□□ -1.15
HMGB3P7-201ENST00000400214 ARIH1Q9Y4X5 557 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P7-201ENST00000400214 AKNAQ7Z591 1439 aa7.86□□□□□ -1.15
HMGB3P7-201ENST00000400214 EHBP1L1Q8N3D4 1523 aa7.85□□□□□ -1.15
HMGB3P7-201ENST00000400214 ZMYM4Q5VZL5 1548 aa7.84□□□□□ -1.15
HMGB3P7-201ENST00000400214 UNCXA6NJT0 531 aa7.84□□□□□ -1.15
HMGB3P7-201ENST00000400214 PATL2C9JE40 543 aaKnown RBP7.84□□□□□ -1.15
HMGB3P7-201ENST00000400214 KCNA1Q09470 495 aa7.84□□□□□ -1.15
HMGB3P7-201ENST00000400214 PDAP1Q13442 181 aaKnown RBP7.84□□□□□ -1.15
HMGB3P7-201ENST00000400214 SUPT6HQ7KZ85 1726 aaKnown RBP7.83□□□□□ -1.16
HMGB3P7-201ENST00000400214 NCKAP5LQ9HCH0 1330 aa7.83□□□□□ -1.16
HMGB3P7-201ENST00000400214 ITSN2Q9NZM3 1697 aa7.83□□□□□ -1.16
HMGB3P7-201ENST00000400214 EFCAB2Q5VUJ9 269 aa7.83□□□□□ -1.16
HMGB3P7-201ENST00000400214 MTUS2Q5JR59 1369 aa7.83□□□□□ -1.16
HMGB3P7-201ENST00000400214 ARHGAP5Q13017 1502 aa7.83□□□□□ -1.16
HMGB3P7-201ENST00000400214 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
HMGB3P7-201ENST00000400214 DENND4BO75064 1496 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P7-201ENST00000400214 ADGRL1O94910 1474 aa7.82□□□□□ -1.16
HMGB3P7-201ENST00000400214 GPR37O15354 613 aa7.82□□□□□ -1.16
HMGB3P7-201ENST00000400214 PPP1R15AO75807 674 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P7-201ENST00000400214 GPR153Q6NV75 609 aa7.82□□□□□ -1.16
HMGB3P7-201ENST00000400214 CABP2Q9NPB3 220 aa7.82□□□□□ -1.16
HMGB3P7-201ENST00000400214 LRRC9Q6ZRR7 1453 aa7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 MAGI2Q86UL8 1455 aa7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 KDM5CP41229 1560 aa7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 POGZQ7Z3K3 1410 aa7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 PPM1GO15355 546 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 AMHR2Q16671 573 aa7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 CCDC27Q2M243 656 aa7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 CCDC125Q86Z20 511 aa7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 CCDC102AQ96A19 550 aa7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 LARP6Q9BRS8 491 aaKnown RBP7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 IGSF5Q9NSI5 407 aa7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 ABCC1P33527 1531 aa7.81□□□□□ -1.16
HMGB3P7-201ENST00000400214 SAMD9LQ8IVG5 1584 aa7.8□□□□□ -1.16
HMGB3P7-201ENST00000400214 SCAPERQ9BY12 1400 aa7.8□□□□□ -1.16
HMGB3P7-201ENST00000400214 ARHGEF40Q8TER5 1519 aa7.8□□□□□ -1.16
HMGB3P7-201ENST00000400214 RAPGEF3O95398 923 aa7.8□□□□□ -1.16
HMGB3P7-201ENST00000400214 PDE4CQ08493 712 aa7.8□□□□□ -1.16
HMGB3P7-201ENST00000400214 ZNF518AQ6AHZ1 1483 aa7.8□□□□□ -1.16
HMGB3P7-201ENST00000400214 BRD1O95696 1058 aa7.79□□□□□ -1.16
HMGB3P7-201ENST00000400214 CCNB3Q8WWL7 1395 aa7.79□□□□□ -1.16
HMGB3P7-201ENST00000400214 NCOA2Q15596 1464 aa7.79□□□□□ -1.16
HMGB3P7-201ENST00000400214 MINK1Q8N4C8 1332 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P7-201ENST00000400214 ACIN1Q9UKV3 1341 aaKnown RBP7.78□□□□□ -1.16
HMGB3P7-201ENST00000400214 KIAA1107Q9UPP5 1409 aa7.78□□□□□ -1.16
HMGB3P7-201ENST00000400214 ARHGEF12Q9NZN5 1544 aa7.78□□□□□ -1.16
HMGB3P7-201ENST00000400214 MFSD10Q14728 455 aa7.78□□□□□ -1.16
HMGB3P7-201ENST00000400214 TMEM92Q6UXU6 159 aa7.78□□□□□ -1.16
HMGB3P7-201ENST00000400214 COG6Q9Y2V7 657 aa7.78□□□□□ -1.16
HMGB3P7-201ENST00000400214 PLEKHH2Q8IVE3 1493 aa7.78□□□□□ -1.16
HMGB3P7-201ENST00000400214 KIDINS220Q9ULH0 1771 aa7.78□□□□□ -1.16
HMGB3P7-201ENST00000400214 ZFYVE16Q7Z3T8 1539 aa7.78□□□□□ -1.16
HMGB3P7-201ENST00000400214 HECW2Q9P2P5 1572 aa7.77□□□□□ -1.17
HMGB3P7-201ENST00000400214 MLH3Q9UHC1 1453 aa7.77□□□□□ -1.17
HMGB3P7-201ENST00000400214 SIGLEC1Q9BZZ2 1709 aa7.77□□□□□ -1.17
HMGB3P7-201ENST00000400214 ADAMTSL3P82987 1691 aa7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 REREQ9P2R6 1566 aa7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 BCORL1Q5H9F3 1711 aa7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 CAMK2BQ13554 666 aa7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 KANK4Q5T7N3 995 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 UBE2Q2Q8WVN8 375 aa7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 CWC22Q9HCG8 908 aaKnown RBP7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 PLA2G2EQ9NZK7 142 aa7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 CFDP1Q9UEE9 299 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 ZNF330Q9Y3S2 320 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 SYCP2Q9BX26 1530 aa7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 TRAPPC8Q9Y2L5 1435 aa7.76□□□□□ -1.17
HMGB3P7-201ENST00000400214 KDM4FA0A1W2PPD8 638 aa7.75□□□□□ -1.17
HMGB3P7-201ENST00000400214 LSM11P83369 360 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMGB3P7-201ENST00000400214 MAP2K5Q13163 448 aa7.75□□□□□ -1.17
HMGB3P7-201ENST00000400214 ANKRD13DQ6ZTN6 518 aa7.75□□□□□ -1.17
HMGB3P7-201ENST00000400214 IVNS1ABPQ9Y6Y0 642 aa7.75□□□□□ -1.17
HMGB3P7-201ENST00000400214 YEATS2Q9ULM3 1422 aa7.75□□□□□ -1.17
HMGB3P7-201ENST00000400214 INO80Q9ULG1 1556 aaPredicted RBP7.75□□□□□ -1.17
HMGB3P7-201ENST00000400214 DIP2CQ9Y2E4 1556 aa7.75□□□□□ -1.17
HMGB3P7-201ENST00000400214 ATP10AO60312 1499 aa7.75□□□□□ -1.17
HMGB3P7-201ENST00000400214 MBD5Q9P267 1494 aa7.75□□□□□ -1.17
HMGB3P7-201ENST00000400214 ABCA6Q8N139 1617 aa7.74□□□□□ -1.17
HMGB3P7-201ENST00000400214 IRF6O14896 467 aa7.74□□□□□ -1.17
HMGB3P7-201ENST00000400214 MS4A1P11836 297 aa7.74□□□□□ -1.17
HMGB3P7-201ENST00000400214 SND1Q7KZF4 910 aaKnown RBP eCLIP7.74□□□□□ -1.17
HMGB3P7-201ENST00000400214 AFAP1Q8N556 730 aa7.74□□□□□ -1.17
HMGB3P7-201ENST00000400214 MIA2Q96PC5 1412 aa7.74□□□□□ -1.17
HMGB3P7-201ENST00000400214 ARHGEF5Q12774 1597 aa7.74□□□□□ -1.17
HMGB3P7-201ENST00000400214 MYOM3Q5VTT5 1437 aa7.73□□□□□ -1.17
HMGB3P7-201ENST00000400214 PDE4AP27815 886 aa7.73□□□□□ -1.17
HMGB3P7-201ENST00000400214 MICALL2Q8IY33 904 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms