RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 PNNQ9H307 717 aaKnown RBP22.88■■□□□ 1.25
KDM1A-202ENST00000400181 VIRMAQ69YN4 1812 aaKnown RBP22.88■■□□□ 1.25
KDM1A-202ENST00000400181 MYOM1P52179 1685 aa22.88■■□□□ 1.25
KDM1A-202ENST00000400181 NSD3Q9BZ95 1437 aa22.87■■□□□ 1.25
KDM1A-202ENST00000400181 ERVK-7P63135 1459 aa22.87■■□□□ 1.25
KDM1A-202ENST00000400181 MVPQ14764 893 aaKnown RBP22.87■■□□□ 1.25
KDM1A-202ENST00000400181 ITPRIPQ8IWB1 547 aa22.86■■□□□ 1.25
KDM1A-202ENST00000400181 CHMP5Q9NZZ3 219 aa22.86■■□□□ 1.25
KDM1A-202ENST00000400181 SMC4Q9NTJ3 1288 aa22.85■■□□□ 1.25
KDM1A-202ENST00000400181 POLR3AO14802 1390 aaPredicted RBP22.85■■□□□ 1.25
KDM1A-202ENST00000400181 DZIP1LQ8IYY4 767 aaKnown RBP22.85■■□□□ 1.25
KDM1A-202ENST00000400181 ZKSCAN2Q63HK3 967 aa22.85■■□□□ 1.25
KDM1A-202ENST00000400181 SCAPERQ9BY12 1400 aa22.85■■□□□ 1.25
KDM1A-202ENST00000400181 KDM5AP29375 1690 aaKnown RBP22.84■■□□□ 1.25
KDM1A-202ENST00000400181 FOXD4L1Q9NU39 408 aa22.84■■□□□ 1.25
KDM1A-202ENST00000400181 PLXNC1O60486 1568 aa22.83■■□□□ 1.25
KDM1A-202ENST00000400181 HSCBQ8IWL3 235 aa22.83■■□□□ 1.25
KDM1A-202ENST00000400181 TMEM132EQ6IEE7 984 aa22.83■■□□□ 1.25
KDM1A-202ENST00000400181 MYH16Q9H6N6 1097 aa22.82■■□□□ 1.24
KDM1A-202ENST00000400181 FSD2A1L4K1 749 aa22.82■■□□□ 1.24
KDM1A-202ENST00000400181 WDR63Q8IWG1 891 aa22.82■■□□□ 1.24
KDM1A-202ENST00000400181 CFAP53Q96M91 514 aa22.81■■□□□ 1.24
KDM1A-202ENST00000400181 U2SURPO15042 1029 aaKnown RBP22.81■■□□□ 1.24
KDM1A-202ENST00000400181 EXOSC9Q06265 439 aaKnown RBP22.8■■□□□ 1.24
KDM1A-202ENST00000400181 CLTCL1P53675 1640 aa22.8■■□□□ 1.24
KDM1A-202ENST00000400181 UGGT1Q9NYU2 1555 aa22.79■■□□□ 1.24
KDM1A-202ENST00000400181 STAC3Q96MF2 364 aa22.78■■□□□ 1.24
KDM1A-202ENST00000400181 TRIM27P14373 513 aa22.78■■□□□ 1.24
KDM1A-202ENST00000400181 SAFB2Q14151 953 aaKnown RBP eCLIP22.78■■□□□ 1.24
KDM1A-202ENST00000400181 NUTM2DQ5VT03 806 aaPredicted RBP22.78■■□□□ 1.24
KDM1A-202ENST00000400181 AAMPQ13685 434 aa22.77■■□□□ 1.24
KDM1A-202ENST00000400181 LNPKQ9C0E8 428 aa22.77■■□□□ 1.24
KDM1A-202ENST00000400181 SPHKAPQ2M3C7 1700 aa22.76■■□□□ 1.23
KDM1A-202ENST00000400181 TRPM2O94759 1503 aa22.76■■□□□ 1.23
KDM1A-202ENST00000400181 CEP152O94986 1710 aa22.76■■□□□ 1.23
KDM1A-202ENST00000400181 GRPEL1Q9HAV7 217 aa22.76■■□□□ 1.23
KDM1A-202ENST00000400181 SSH1Q8WYL5 1049 aa22.76■■□□□ 1.23
KDM1A-202ENST00000400181 KANK1Q14678 1352 aa22.75■■□□□ 1.23
KDM1A-202ENST00000400181 MRE11P49959 708 aa22.75■■□□□ 1.23
KDM1A-202ENST00000400181 SLC24A1O60721 1099 aa22.75■■□□□ 1.23
KDM1A-202ENST00000400181 HSP90AA1P07900 732 aaKnown RBP22.75■■□□□ 1.23
KDM1A-202ENST00000400181 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
KDM1A-202ENST00000400181 PLCH2O75038 1416 aa22.74■■□□□ 1.23
KDM1A-202ENST00000400181 HSP90AB1P08238 724 aaKnown RBP22.73■■□□□ 1.23
KDM1A-202ENST00000400181 NOB1Q9ULX3 412 aaKnown RBP22.73■■□□□ 1.23
KDM1A-202ENST00000400181 CLCN1P35523 988 aa22.73■■□□□ 1.23
KDM1A-202ENST00000400181 PTPRTO14522 1441 aa22.72■■□□□ 1.23
KDM1A-202ENST00000400181 TMEM57Q8N5G2 664 aa22.72■■□□□ 1.23
KDM1A-202ENST00000400181 DDX11L8A8MPP1 907 aa22.71■■□□□ 1.23
KDM1A-202ENST00000400181 TRIM44Q96DX7 344 aaPredicted RBP22.7■■□□□ 1.22
KDM1A-202ENST00000400181 TNPO1Q92973 898 aaKnown RBP22.7■■□□□ 1.22
KDM1A-202ENST00000400181 DDX19BQ9UMR2 479 aa22.7■■□□□ 1.22
KDM1A-202ENST00000400181 RTEL1-TNFRSF6BF6WH68 1400 aa22.69■■□□□ 1.22
KDM1A-202ENST00000400181 ATF7IPQ6VMQ6 1270 aa22.69■■□□□ 1.22
KDM1A-202ENST00000400181 ERBB4Q15303 1308 aa22.69■■□□□ 1.22
KDM1A-202ENST00000400181 GAS2L3Q86XJ1 694 aa22.68■■□□□ 1.22
KDM1A-202ENST00000400181 ESPNB1AK53 854 aa22.68■■□□□ 1.22
KDM1A-202ENST00000400181 ZNF692Q9BU19 519 aaPredicted RBP22.68■■□□□ 1.22
KDM1A-202ENST00000400181 HSP90AA2PQ14568 343 aaPredicted RBP22.67■■□□□ 1.22
KDM1A-202ENST00000400181 CCDC27Q2M243 656 aa22.67■■□□□ 1.22
KDM1A-202ENST00000400181 CABP2Q9NPB3 220 aa22.67■■□□□ 1.22
KDM1A-202ENST00000400181 NOS1P29475 1434 aa22.66■■□□□ 1.22
KDM1A-202ENST00000400181 ERCC6L2Q5T890 1561 aa22.66■■□□□ 1.22
KDM1A-202ENST00000400181 IQSEC2Q5JU85 1478 aa22.66■■□□□ 1.22
KDM1A-202ENST00000400181 VSIG10Q8N0Z9 540 aa22.66■■□□□ 1.22
KDM1A-202ENST00000400181 HDAC1Q13547 482 aaPredicted RBP22.66■■□□□ 1.22
KDM1A-202ENST00000400181 GGNBP2Q9H3C7 697 aa22.66■■□□□ 1.22
KDM1A-202ENST00000400181 ABCA6Q8N139 1617 aa22.65■■□□□ 1.22
KDM1A-202ENST00000400181 C1orf115Q9H7X2 142 aa22.65■■□□□ 1.22
KDM1A-202ENST00000400181 SHPRHQ149N8 1683 aa22.64■■□□□ 1.22
KDM1A-202ENST00000400181 TMPOP42166 694 aaKnown RBP22.64■■□□□ 1.21
KDM1A-202ENST00000400181 RBM42Q9BTD8 480 aaKnown RBP22.64■■□□□ 1.21
KDM1A-202ENST00000400181 ZMYM3Q14202 1370 aa22.64■■□□□ 1.21
KDM1A-202ENST00000400181 SMC5Q8IY18 1101 aa22.63■■□□□ 1.21
KDM1A-202ENST00000400181 ABCC1P33527 1531 aa22.63■■□□□ 1.21
KDM1A-202ENST00000400181 CD2BP2O95400 341 aaKnown RBP22.63■■□□□ 1.21
KDM1A-202ENST00000400181 ANKRD45Q5TZF3 282 aa22.63■■□□□ 1.21
KDM1A-202ENST00000400181 ZNF518AQ6AHZ1 1483 aa22.62■■□□□ 1.21
KDM1A-202ENST00000400181 RIPK4P57078 832 aa22.61■■□□□ 1.21
KDM1A-202ENST00000400181 GLIPR1L2Q4G1C9 344 aa22.61■■□□□ 1.21
KDM1A-202ENST00000400181 GBP4Q96PP9 640 aa22.61■■□□□ 1.21
KDM1A-202ENST00000400181 TRIM35Q9UPQ4 493 aa22.61■■□□□ 1.21
KDM1A-202ENST00000400181 MAP3K4Q9Y6R4 1608 aa22.6■■□□□ 1.21
KDM1A-202ENST00000400181 ZBTB40Q9NUA8 1239 aa22.6■■□□□ 1.21
KDM1A-202ENST00000400181 STK26Q9P289 416 aa22.59■■□□□ 1.21
KDM1A-202ENST00000400181 CHD1LQ86WJ1 897 aa22.59■■□□□ 1.21
KDM1A-202ENST00000400181 GGT6Q6P531 493 aa22.58■■□□□ 1.21
KDM1A-202ENST00000400181 CFAP65Q6ZU64 1925 aaKnown RBP22.58■■□□□ 1.21
KDM1A-202ENST00000400181 ELL2O00472 640 aaPredicted RBP22.58■■□□□ 1.2
KDM1A-202ENST00000400181 NUCB1Q02818 461 aa22.57■■□□□ 1.2
KDM1A-202ENST00000400181 SSFA2P28290 1259 aa22.57■■□□□ 1.2
KDM1A-202ENST00000400181 RBM25P49756 843 aaKnown RBP22.56■■□□□ 1.2
KDM1A-202ENST00000400181 SRPK2P78362 688 aaKnown RBP22.56■■□□□ 1.2
KDM1A-202ENST00000400181 ZFYVE16Q7Z3T8 1539 aa22.55■■□□□ 1.2
KDM1A-202ENST00000400181 IPO8O15397 1037 aaKnown RBP22.54■■□□□ 1.2
KDM1A-202ENST00000400181 NCLP19338 710 aaKnown RBP22.54■■□□□ 1.2
KDM1A-202ENST00000400181 DDIT3P35638 169 aa22.54■■□□□ 1.2
KDM1A-202ENST00000400181 C14orf93Q9H972 538 aaKnown RBP22.54■■□□□ 1.2
KDM1A-202ENST00000400181 SBNO2Q9Y2G9 1366 aa22.54■■□□□ 1.2
KDM1A-202ENST00000400181 RAB3GAP1Q15042 981 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms