RNA–Protein interactions for RNA: ENST00000399808.4

IFITM3-201, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene IFITM3, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-201ENST00000399808 EP400Q96L91 3159 aa22.99■■□□□ 1.27
IFITM3-201ENST00000399808 VGFO15240 615 aaPredicted RBP22.97■■□□□ 1.27
IFITM3-201ENST00000399808 PXDNQ92626 1479 aa22.97■■□□□ 1.27
IFITM3-201ENST00000399808 CCDC125Q86Z20 511 aa22.96■■□□□ 1.27
IFITM3-201ENST00000399808 HFM1A2PYH4 1435 aa22.95■■□□□ 1.26
IFITM3-201ENST00000399808 PPLO60437 1756 aa22.95■■□□□ 1.26
IFITM3-201ENST00000399808 ESCO1Q5FWF5 840 aa22.94■■□□□ 1.26
IFITM3-201ENST00000399808 GJD4Q96KN9 370 aaPredicted RBP22.94■■□□□ 1.26
IFITM3-201ENST00000399808 NPHP3Q7Z494 1330 aa22.93■■□□□ 1.26
IFITM3-201ENST00000399808 XPCQ01831 940 aaPredicted RBP22.93■■□□□ 1.26
IFITM3-201ENST00000399808 FOXD1Q16676 465 aa22.93■■□□□ 1.26
IFITM3-201ENST00000399808 BRWD3Q6RI45 1802 aa22.93■■□□□ 1.26
IFITM3-201ENST00000399808 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.93■■□□□ 1.26
IFITM3-201ENST00000399808 FOXO3O43524 673 aa22.92■■□□□ 1.26
IFITM3-201ENST00000399808 CDC42BPGQ6DT37 1551 aa22.92■■□□□ 1.26
IFITM3-201ENST00000399808 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
IFITM3-201ENST00000399808 GLI3P10071 1580 aa22.9■■□□□ 1.26
IFITM3-201ENST00000399808 RPGRIP1LQ68CZ1 1315 aa22.89■■□□□ 1.26
IFITM3-201ENST00000399808 NAIPQ13075 1403 aa22.87■■□□□ 1.25
IFITM3-201ENST00000399808 SLIT2O94813 1529 aa22.86■■□□□ 1.25
IFITM3-201ENST00000399808 RALGAPBQ86X10 1494 aa22.85■■□□□ 1.25
IFITM3-201ENST00000399808 NUTM2FA1L443 756 aa22.85■■□□□ 1.25
IFITM3-201ENST00000399808 UNC5CLQ8IV45 518 aa22.85■■□□□ 1.25
IFITM3-201ENST00000399808 WAPLQ7Z5K2 1190 aa22.84■■□□□ 1.25
IFITM3-201ENST00000399808 BLMP54132 1417 aaPredicted RBP22.83■■□□□ 1.25
IFITM3-201ENST00000399808 DEFB132Q7Z7B7 95 aa22.83■■□□□ 1.25
IFITM3-201ENST00000399808 SPATA31A3Q5VYP0 1347 aa22.82■■□□□ 1.24
IFITM3-201ENST00000399808 RGPD8O14715 1765 aaPredicted RBP22.81■■□□□ 1.24
IFITM3-201ENST00000399808 ADGRF5Q8IZF2 1346 aa22.81■■□□□ 1.24
IFITM3-201ENST00000399808 FMN2Q9NZ56 1722 aa22.8■■□□□ 1.24
IFITM3-201ENST00000399808 LRPPRCP42704 1394 aaKnown RBP22.8■■□□□ 1.24
IFITM3-201ENST00000399808 USP32Q8NFA0 1604 aa22.79■■□□□ 1.24
IFITM3-201ENST00000399808 STK26Q9P289 416 aa22.79■■□□□ 1.24
IFITM3-201ENST00000399808 TECPR2O15040 1411 aa22.79■■□□□ 1.24
IFITM3-201ENST00000399808 PLEKHH1Q9ULM0 1364 aa22.78■■□□□ 1.24
IFITM3-201ENST00000399808 KNDC1Q76NI1 1749 aa22.77■■□□□ 1.23
IFITM3-201ENST00000399808 SLC4A1APQ9BWU0 796 aaKnown RBP22.76■■□□□ 1.23
IFITM3-201ENST00000399808 KIF1AQ12756 1690 aa22.76■■□□□ 1.23
IFITM3-201ENST00000399808 IFT172Q9UG01 1749 aa22.76■■□□□ 1.23
IFITM3-201ENST00000399808 KRT28Q7Z3Y7 464 aa22.75■■□□□ 1.23
IFITM3-201ENST00000399808 SEPT12Q8IYM1 358 aa22.75■■□□□ 1.23
IFITM3-201ENST00000399808 ABCC11Q96J66 1382 aa22.75■■□□□ 1.23
IFITM3-201ENST00000399808 RRBP1Q9P2E9 1410 aaKnown RBP22.74■■□□□ 1.23
IFITM3-201ENST00000399808 TMEM132EQ6IEE7 984 aa22.74■■□□□ 1.23
IFITM3-201ENST00000399808 LRP5O75197 1615 aa22.74■■□□□ 1.23
IFITM3-201ENST00000399808 PLCH1Q4KWH8 1693 aa22.74■■□□□ 1.23
IFITM3-201ENST00000399808 ONECUT3O60422 494 aaPredicted RBP22.73■■□□□ 1.23
IFITM3-201ENST00000399808 NWD2Q9ULI1 1742 aa22.73■■□□□ 1.23
IFITM3-201ENST00000399808 VPS72Q15906 364 aa22.72■■□□□ 1.23
IFITM3-201ENST00000399808 CABLES1Q8TDN4 633 aa22.72■■□□□ 1.23
IFITM3-201ENST00000399808 CCDC144AA2RUR9 1427 aa22.72■■□□□ 1.23
IFITM3-201ENST00000399808 ABCA3Q99758 1704 aa22.71■■□□□ 1.23
IFITM3-201ENST00000399808 RGL3Q3MIN7 710 aa22.7■■□□□ 1.22
IFITM3-201ENST00000399808 SPATA31E1Q6ZUB1 1445 aa22.69■■□□□ 1.22
IFITM3-201ENST00000399808 SF3B2Q13435 895 aaKnown RBP22.69■■□□□ 1.22
IFITM3-201ENST00000399808 TNS3Q68CZ2 1445 aa22.67■■□□□ 1.22
IFITM3-201ENST00000399808 KRT27Q7Z3Y8 459 aa22.67■■□□□ 1.22
IFITM3-201ENST00000399808 YTHDC2Q9H6S0 1430 aaKnown RBP22.66■■□□□ 1.22
IFITM3-201ENST00000399808 PHF8Q9UPP1 1060 aa22.66■■□□□ 1.22
IFITM3-201ENST00000399808 ANKRD30BQ9BXX2 1392 aa22.65■■□□□ 1.22
IFITM3-201ENST00000399808 PLEKHG5O94827 1062 aa22.65■■□□□ 1.22
IFITM3-201ENST00000399808 PIK3C2GO75747 1445 aa22.65■■□□□ 1.22
IFITM3-201ENST00000399808 PSDA5PKW4 1024 aaPredicted RBP22.64■■□□□ 1.21
IFITM3-201ENST00000399808 FAM83GA6ND36 823 aa22.64■■□□□ 1.21
IFITM3-201ENST00000399808 HAP1P54257 671 aaPredicted RBP22.64■■□□□ 1.21
IFITM3-201ENST00000399808 CCDC9Q9Y3X0 531 aaKnown RBP22.64■■□□□ 1.21
IFITM3-201ENST00000399808 PSME1Q06323 249 aa22.63■■□□□ 1.21
IFITM3-201ENST00000399808 SIRT1Q96EB6 747 aa22.63■■□□□ 1.21
IFITM3-201ENST00000399808 NRAPQ86VF7 1730 aa22.62■■□□□ 1.21
IFITM3-201ENST00000399808 HRCP23327 699 aa22.62■■□□□ 1.21
IFITM3-201ENST00000399808 SBNO1A3KN83 1393 aa22.62■■□□□ 1.21
IFITM3-201ENST00000399808 NRXN1Q9ULB1 1477 aa22.61■■□□□ 1.21
IFITM3-201ENST00000399808 LMOD2Q6P5Q4 547 aa22.59■■□□□ 1.21
IFITM3-201ENST00000399808 BAG6P46379 1132 aa22.58■■□□□ 1.21
IFITM3-201ENST00000399808 FAM98CQ17RN3 349 aaKnown RBP22.57■■□□□ 1.2
IFITM3-201ENST00000399808 C14orf93Q9H972 538 aaKnown RBP22.57■■□□□ 1.2
IFITM3-201ENST00000399808 ARHGEF10O15013 1369 aa22.57■■□□□ 1.2
IFITM3-201ENST00000399808 TRPM3Q9HCF6 1732 aaPredicted RBP22.57■■□□□ 1.2
IFITM3-201ENST00000399808 RGPD1P0DJD0 1748 aa22.56■■□□□ 1.2
IFITM3-201ENST00000399808 EN1Q05925 392 aaPredicted RBP22.55■■□□□ 1.2
IFITM3-201ENST00000399808 PMFBP1Q8TBY8 1022 aa22.55■■□□□ 1.2
IFITM3-201ENST00000399808 A0A0G2JS52 829 aa22.54■■□□□ 1.2
IFITM3-201ENST00000399808 MYT1Q01538 1121 aa22.54■■□□□ 1.2
IFITM3-201ENST00000399808 SAFB2Q14151 953 aaKnown RBP eCLIP22.54■■□□□ 1.2
IFITM3-201ENST00000399808 CFAP70Q5T0N1 1121 aa22.54■■□□□ 1.2
IFITM3-201ENST00000399808 FAM182BQ5T319 152 aa22.54■■□□□ 1.2
IFITM3-201ENST00000399808 ALS2Q96Q42 1657 aa22.54■■□□□ 1.2
IFITM3-201ENST00000399808 MPHOSPH9Q99550 1183 aa22.53■■□□□ 1.2
IFITM3-201ENST00000399808 BTG4Q9NY30 223 aa22.53■■□□□ 1.2
IFITM3-201ENST00000399808 COL14A1Q05707 1796 aaKnown RBP22.53■■□□□ 1.2
IFITM3-201ENST00000399808 PRAM1Q96QH2 718 aa22.52■■□□□ 1.2
IFITM3-201ENST00000399808 DHX57Q6P158 1386 aaKnown RBP22.51■■□□□ 1.19
IFITM3-201ENST00000399808 TNS1Q9HBL0 1735 aaKnown RBP22.51■■□□□ 1.19
IFITM3-201ENST00000399808 CRYBG1Q9Y4K1 1723 aa22.5■■□□□ 1.19
IFITM3-201ENST00000399808 R3HDM1Q15032 1099 aaKnown RBP22.49■■□□□ 1.19
IFITM3-201ENST00000399808 THSD7AQ9UPZ6 1657 aa22.49■■□□□ 1.19
IFITM3-201ENST00000399808 ANKARQ7Z5J8 1434 aa22.48■■□□□ 1.19
IFITM3-201ENST00000399808 SPATA31A5Q5VU36 1347 aa22.48■■□□□ 1.19
IFITM3-201ENST00000399808 SPATA31A7Q8IWB4 1347 aa22.48■■□□□ 1.19
IFITM3-201ENST00000399808 DISP2A7MBM2 1401 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms