RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 GJD4Q96KN9 370 aaPredicted RBP27.66■■■□□ 2.02
UFD1-202ENST00000399523 NPHP3Q7Z494 1330 aa27.65■■■□□ 2.02
UFD1-202ENST00000399523 MARF1Q9Y4F3 1742 aaKnown RBP27.64■■■□□ 2.02
UFD1-202ENST00000399523 VGFO15240 615 aaPredicted RBP27.64■■■□□ 2.02
UFD1-202ENST00000399523 HFM1A2PYH4 1435 aa27.64■■■□□ 2.02
UFD1-202ENST00000399523 KIF1BO60333 1816 aa27.64■■■□□ 2.01
UFD1-202ENST00000399523 PXDNQ92626 1479 aa27.62■■■□□ 2.01
UFD1-202ENST00000399523 ITGAEP38570 1179 aa27.61■■■□□ 2.01
UFD1-202ENST00000399523 ESCO1Q5FWF5 840 aa27.59■■■□□ 2.01
UFD1-202ENST00000399523 BLMP54132 1417 aaPredicted RBP27.58■■■□□ 2.01
UFD1-202ENST00000399523 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.57■■■□□ 2
UFD1-202ENST00000399523 CDC42BPGQ6DT37 1551 aa27.56■■■□□ 2
UFD1-202ENST00000399523 FOXO3O43524 673 aa27.55■■■□□ 2
UFD1-202ENST00000399523 RPGRIP1LQ68CZ1 1315 aa27.55■■■□□ 2
UFD1-202ENST00000399523 UNC5CLQ8IV45 518 aa27.54■■■□□ 2
UFD1-202ENST00000399523 RALGAPBQ86X10 1494 aa27.53■■■□□ 2
UFD1-202ENST00000399523 XPCQ01831 940 aaPredicted RBP27.53■■■□□ 2
UFD1-202ENST00000399523 GLI3P10071 1580 aa27.52■■■□□ 2
UFD1-202ENST00000399523 SLIT2O94813 1529 aa27.52■■■□□ 2
UFD1-202ENST00000399523 LRPPRCP42704 1394 aaKnown RBP27.52■■■□□ 2
UFD1-202ENST00000399523 DEFB132Q7Z7B7 95 aa27.5■■□□□ 1.99
UFD1-202ENST00000399523 BRWD3Q6RI45 1802 aa27.48■■□□□ 1.99
UFD1-202ENST00000399523 PPLO60437 1756 aa27.46■■□□□ 1.99
UFD1-202ENST00000399523 NAIPQ13075 1403 aa27.46■■□□□ 1.99
UFD1-202ENST00000399523 LRP5O75197 1615 aa27.45■■□□□ 1.99
UFD1-202ENST00000399523 SPATA31A3Q5VYP0 1347 aa27.44■■□□□ 1.98
UFD1-202ENST00000399523 SF3B2Q13435 895 aaKnown RBP27.44■■□□□ 1.98
UFD1-202ENST00000399523 SEPT12Q8IYM1 358 aa27.43■■□□□ 1.98
UFD1-202ENST00000399523 ONECUT3O60422 494 aaPredicted RBP27.41■■□□□ 1.98
UFD1-202ENST00000399523 TECPR2O15040 1411 aa27.41■■□□□ 1.98
UFD1-202ENST00000399523 NUTM2FA1L443 756 aa27.4■■□□□ 1.98
UFD1-202ENST00000399523 USP32Q8NFA0 1604 aa27.4■■□□□ 1.98
UFD1-202ENST00000399523 VPS72Q15906 364 aa27.39■■□□□ 1.98
UFD1-202ENST00000399523 WAPLQ7Z5K2 1190 aa27.39■■□□□ 1.98
UFD1-202ENST00000399523 CCDC144AA2RUR9 1427 aa27.38■■□□□ 1.97
UFD1-202ENST00000399523 KRT28Q7Z3Y7 464 aa27.35■■□□□ 1.97
UFD1-202ENST00000399523 STK26Q9P289 416 aa27.35■■□□□ 1.97
UFD1-202ENST00000399523 KIF1AQ12756 1690 aa27.35■■□□□ 1.97
UFD1-202ENST00000399523 ABCC11Q96J66 1382 aa27.35■■□□□ 1.97
UFD1-202ENST00000399523 FMN2Q9NZ56 1722 aa27.34■■□□□ 1.97
UFD1-202ENST00000399523 KRT27Q7Z3Y8 459 aa27.34■■□□□ 1.97
UFD1-202ENST00000399523 ADGRF5Q8IZF2 1346 aa27.34■■□□□ 1.97
UFD1-202ENST00000399523 NWD2Q9ULI1 1742 aa27.33■■□□□ 1.96
UFD1-202ENST00000399523 PLEKHH1Q9ULM0 1364 aa27.32■■□□□ 1.96
UFD1-202ENST00000399523 HRCP23327 699 aa27.3■■□□□ 1.96
UFD1-202ENST00000399523 TNS3Q68CZ2 1445 aa27.3■■□□□ 1.96
UFD1-202ENST00000399523 RRBP1Q9P2E9 1410 aaKnown RBP27.3■■□□□ 1.96
UFD1-202ENST00000399523 HAP1P54257 671 aaPredicted RBP27.29■■□□□ 1.96
UFD1-202ENST00000399523 PLCH1Q4KWH8 1693 aa27.29■■□□□ 1.96
UFD1-202ENST00000399523 KNDC1Q76NI1 1749 aa27.29■■□□□ 1.96
UFD1-202ENST00000399523 PSDA5PKW4 1024 aaPredicted RBP27.28■■□□□ 1.96
UFD1-202ENST00000399523 BAG6P46379 1132 aa27.28■■□□□ 1.96
UFD1-202ENST00000399523 CABLES1Q8TDN4 633 aa27.28■■□□□ 1.96
UFD1-202ENST00000399523 SLC4A1APQ9BWU0 796 aaKnown RBP27.28■■□□□ 1.96
UFD1-202ENST00000399523 PSME1Q06323 249 aa27.27■■□□□ 1.96
UFD1-202ENST00000399523 CCDC9Q9Y3X0 531 aaKnown RBP27.27■■□□□ 1.96
UFD1-202ENST00000399523 TMEM132EQ6IEE7 984 aa27.26■■□□□ 1.95
UFD1-202ENST00000399523 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
UFD1-202ENST00000399523 PHF8Q9UPP1 1060 aa27.25■■□□□ 1.95
UFD1-202ENST00000399523 SBNO1A3KN83 1393 aa27.24■■□□□ 1.95
UFD1-202ENST00000399523 ANKRD30BQ9BXX2 1392 aa27.23■■□□□ 1.95
UFD1-202ENST00000399523 RGPD8O14715 1765 aaPredicted RBP27.23■■□□□ 1.95
UFD1-202ENST00000399523 SIRT1Q96EB6 747 aa27.23■■□□□ 1.95
UFD1-202ENST00000399523 ABCA3Q99758 1704 aa27.22■■□□□ 1.95
UFD1-202ENST00000399523 FAM83GA6ND36 823 aa27.22■■□□□ 1.95
UFD1-202ENST00000399523 SPATA31E1Q6ZUB1 1445 aa27.21■■□□□ 1.95
UFD1-202ENST00000399523 YTHDC2Q9H6S0 1430 aaKnown RBP27.21■■□□□ 1.95
UFD1-202ENST00000399523 ARHGEF10O15013 1369 aa27.21■■□□□ 1.95
UFD1-202ENST00000399523 IFT172Q9UG01 1749 aa27.2■■□□□ 1.94
UFD1-202ENST00000399523 NRXN1Q9ULB1 1477 aa27.19■■□□□ 1.94
UFD1-202ENST00000399523 PIK3C2GO75747 1445 aa27.19■■□□□ 1.94
UFD1-202ENST00000399523 RGL3Q3MIN7 710 aa27.19■■□□□ 1.94
UFD1-202ENST00000399523 A0A0G2JS52 829 aa27.17■■□□□ 1.94
UFD1-202ENST00000399523 PLEKHG5O94827 1062 aa27.17■■□□□ 1.94
UFD1-202ENST00000399523 MYT1Q01538 1121 aa27.17■■□□□ 1.94
UFD1-202ENST00000399523 FAM98CQ17RN3 349 aaKnown RBP27.17■■□□□ 1.94
UFD1-202ENST00000399523 EN1Q05925 392 aaPredicted RBP27.16■■□□□ 1.94
UFD1-202ENST00000399523 LMOD2Q6P5Q4 547 aa27.16■■□□□ 1.94
UFD1-202ENST00000399523 NRAPQ86VF7 1730 aa27.16■■□□□ 1.94
UFD1-202ENST00000399523 RGPD1P0DJD0 1748 aa27.14■■□□□ 1.94
UFD1-202ENST00000399523 DISP2A7MBM2 1401 aa27.13■■□□□ 1.93
UFD1-202ENST00000399523 R3HDM1Q15032 1099 aaKnown RBP27.12■■□□□ 1.93
UFD1-202ENST00000399523 BTG4Q9NY30 223 aa27.12■■□□□ 1.93
UFD1-202ENST00000399523 C14orf93Q9H972 538 aaKnown RBP27.1■■□□□ 1.93
UFD1-202ENST00000399523 SPATA31A5Q5VU36 1347 aa27.08■■□□□ 1.93
UFD1-202ENST00000399523 SPATA31A7Q8IWB4 1347 aa27.08■■□□□ 1.93
UFD1-202ENST00000399523 COL14A1Q05707 1796 aaKnown RBP27.07■■□□□ 1.92
UFD1-202ENST00000399523 FAM182BQ5T319 152 aa27.07■■□□□ 1.92
UFD1-202ENST00000399523 PMFBP1Q8TBY8 1022 aa27.06■■□□□ 1.92
UFD1-202ENST00000399523 ANKARQ7Z5J8 1434 aa27.06■■□□□ 1.92
UFD1-202ENST00000399523 TNS1Q9HBL0 1735 aaKnown RBP27.05■■□□□ 1.92
UFD1-202ENST00000399523 TRPM3Q9HCF6 1732 aaPredicted RBP27.05■■□□□ 1.92
UFD1-202ENST00000399523 DHX57Q6P158 1386 aaKnown RBP27.05■■□□□ 1.92
UFD1-202ENST00000399523 PRAM1Q96QH2 718 aa27.04■■□□□ 1.92
UFD1-202ENST00000399523 THSD7AQ9UPZ6 1657 aa27.04■■□□□ 1.92
UFD1-202ENST00000399523 ALS2Q96Q42 1657 aa27.02■■□□□ 1.92
UFD1-202ENST00000399523 EZH2Q15910 746 aaKnown RBP27.02■■□□□ 1.92
UFD1-202ENST00000399523 SAFB2Q14151 953 aaKnown RBP eCLIP27.01■■□□□ 1.91
UFD1-202ENST00000399523 CFAP70Q5T0N1 1121 aa27.01■■□□□ 1.91
UFD1-202ENST00000399523 CAMKK2Q96RR4 588 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms