RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 RALBP1Q15311 655 aa12.82□□□□□ -0.36
LINC00243-201ENST00000399196 CC2D1BQ5T0F9 858 aaKnown RBP12.82□□□□□ -0.36
LINC00243-201ENST00000399196 TXNDC2Q86VQ3 553 aa12.82□□□□□ -0.36
LINC00243-201ENST00000399196 HSPA2P54652 639 aa12.81□□□□□ -0.36
LINC00243-201ENST00000399196 QRICH2Q9H0J4 1663 aa12.81□□□□□ -0.36
LINC00243-201ENST00000399196 ALKQ9UM73 1620 aa12.81□□□□□ -0.36
LINC00243-201ENST00000399196 KTN1Q86UP2 1357 aaKnown RBP12.81□□□□□ -0.36
LINC00243-201ENST00000399196 SUPT16HQ9Y5B9 1047 aaKnown RBP12.81□□□□□ -0.36
LINC00243-201ENST00000399196 ARHGEF28Q8N1W1 1705 aaKnown RBP12.8□□□□□ -0.36
LINC00243-201ENST00000399196 ADAMTS13Q76LX8 1427 aa12.8□□□□□ -0.36
LINC00243-201ENST00000399196 YTHDC2Q9H6S0 1430 aaKnown RBP12.79□□□□□ -0.36
LINC00243-201ENST00000399196 SAFB2Q14151 953 aaKnown RBP eCLIP12.79□□□□□ -0.36
LINC00243-201ENST00000399196 BRD4O60885 1362 aaPredicted RBP12.79□□□□□ -0.36
LINC00243-201ENST00000399196 PLEKHG1Q9ULL1 1385 aa12.79□□□□□ -0.36
LINC00243-201ENST00000399196 SENP3-EIF4A1A0A087X0R7 540 aa12.79□□□□□ -0.36
LINC00243-201ENST00000399196 ZBTB22O15209 634 aa12.79□□□□□ -0.36
LINC00243-201ENST00000399196 TMC1Q8TDI8 760 aa12.79□□□□□ -0.36
LINC00243-201ENST00000399196 POGKQ9P215 609 aa12.79□□□□□ -0.36
LINC00243-201ENST00000399196 EID1Q9Y6B2 187 aa12.78□□□□□ -0.36
LINC00243-201ENST00000399196 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
LINC00243-201ENST00000399196 MED14O60244 1454 aa12.77□□□□□ -0.36
LINC00243-201ENST00000399196 ZBED9Q6R2W3 1325 aa12.77□□□□□ -0.36
LINC00243-201ENST00000399196 EVC2Q86UK5 1308 aa12.77□□□□□ -0.36
LINC00243-201ENST00000399196 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.36
LINC00243-201ENST00000399196 KNSTRNQ9Y448 316 aa12.77□□□□□ -0.37
LINC00243-201ENST00000399196 NLRP13Q86W25 1043 aa12.76□□□□□ -0.37
LINC00243-201ENST00000399196 PRAM1Q96QH2 718 aa12.76□□□□□ -0.37
LINC00243-201ENST00000399196 METP08581 1390 aa12.76□□□□□ -0.37
LINC00243-201ENST00000399196 ANKLE2Q86XL3 938 aa12.76□□□□□ -0.37
LINC00243-201ENST00000399196 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
LINC00243-201ENST00000399196 SLC26A8Q96RN1 970 aa12.76□□□□□ -0.37
LINC00243-201ENST00000399196 CARD14Q9BXL6 1004 aa12.76□□□□□ -0.37
LINC00243-201ENST00000399196 STRCQ7RTU9 1775 aa12.75□□□□□ -0.37
LINC00243-201ENST00000399196 TULP4Q9NRJ4 1543 aa12.75□□□□□ -0.37
LINC00243-201ENST00000399196 NPHP4O75161 1426 aaPredicted RBP12.73□□□□□ -0.37
LINC00243-201ENST00000399196 MINK1Q8N4C8 1332 aaPredicted RBP12.73□□□□□ -0.37
LINC00243-201ENST00000399196 PTPRUQ92729 1446 aa12.73□□□□□ -0.37
LINC00243-201ENST00000399196 SRPK2P78362 688 aaKnown RBP12.72□□□□□ -0.37
LINC00243-201ENST00000399196 FKBP8Q14318 412 aa12.72□□□□□ -0.37
LINC00243-201ENST00000399196 ABCC11Q96J66 1382 aa12.72□□□□□ -0.37
LINC00243-201ENST00000399196 DIP2AQ14689 1571 aa12.71□□□□□ -0.37
LINC00243-201ENST00000399196 ADRA2BP18089 450 aa12.71□□□□□ -0.37
LINC00243-201ENST00000399196 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
LINC00243-201ENST00000399196 SLC12A5Q9H2X9 1139 aa12.71□□□□□ -0.37
LINC00243-201ENST00000399196 CABP2Q9NPB3 220 aa12.71□□□□□ -0.38
LINC00243-201ENST00000399196 DLC1Q96QB1 1528 aa12.7□□□□□ -0.38
LINC00243-201ENST00000399196 PPP2R1AP30153 589 aa12.7□□□□□ -0.38
LINC00243-201ENST00000399196 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
LINC00243-201ENST00000399196 WAPLQ7Z5K2 1190 aa12.7□□□□□ -0.38
LINC00243-201ENST00000399196 NPC1L1Q9UHC9 1359 aa12.7□□□□□ -0.38
LINC00243-201ENST00000399196 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
LINC00243-201ENST00000399196 TBX22Q9Y458 520 aa12.69□□□□□ -0.38
LINC00243-201ENST00000399196 KNDC1Q76NI1 1749 aa12.69□□□□□ -0.38
LINC00243-201ENST00000399196 XRN1Q8IZH2 1706 aaKnown RBP12.68□□□□□ -0.38
LINC00243-201ENST00000399196 PLEKHH1Q9ULM0 1364 aa12.68□□□□□ -0.38
LINC00243-201ENST00000399196 ATAD2Q6PL18 1390 aa12.67□□□□□ -0.38
LINC00243-201ENST00000399196 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
LINC00243-201ENST00000399196 CPS1P31327 1500 aa12.67□□□□□ -0.38
LINC00243-201ENST00000399196 TECPR2O15040 1411 aa12.67□□□□□ -0.38
LINC00243-201ENST00000399196 ROBO2Q9HCK4 1378 aa12.67□□□□□ -0.38
LINC00243-201ENST00000399196 CHD2O14647 1828 aaKnown RBP12.66□□□□□ -0.38
LINC00243-201ENST00000399196 NSD3Q9BZ95 1437 aa12.66□□□□□ -0.38
LINC00243-201ENST00000399196 NINLQ9Y2I6 1382 aa12.65□□□□□ -0.38
LINC00243-201ENST00000399196 SIRT1Q96EB6 747 aa12.65□□□□□ -0.38
LINC00243-201ENST00000399196 FAM135BQ49AJ0 1406 aa12.65□□□□□ -0.38
LINC00243-201ENST00000399196 STRCP1A6NGW2 1772 aa12.65□□□□□ -0.38
LINC00243-201ENST00000399196 IRX6P78412 446 aaPredicted RBP12.65□□□□□ -0.39
LINC00243-201ENST00000399196 AMOTL2Q9Y2J4 779 aa12.65□□□□□ -0.39
LINC00243-201ENST00000399196 BLMP54132 1417 aaPredicted RBP12.64□□□□□ -0.39
LINC00243-201ENST00000399196 SMG6Q86US8 1419 aaKnown RBP12.64□□□□□ -0.39
LINC00243-201ENST00000399196 ANKRD36BQ8N2N9 1353 aa12.64□□□□□ -0.39
LINC00243-201ENST00000399196 NWD1Q149M9 1564 aa12.63□□□□□ -0.39
LINC00243-201ENST00000399196 KCNA6P17658 529 aa12.63□□□□□ -0.39
LINC00243-201ENST00000399196 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
LINC00243-201ENST00000399196 ADAMTS8Q9UP79 889 aa12.63□□□□□ -0.39
LINC00243-201ENST00000399196 SALL2Q9Y467 1007 aaPredicted RBP12.63□□□□□ -0.39
LINC00243-201ENST00000399196 PIK3R4Q99570 1358 aa12.63□□□□□ -0.39
LINC00243-201ENST00000399196 CGNL1Q0VF96 1302 aa12.62□□□□□ -0.39
LINC00243-201ENST00000399196 WASLO00401 505 aaPredicted RBP12.62□□□□□ -0.39
LINC00243-201ENST00000399196 PTCH1Q13635 1447 aa12.62□□□□□ -0.39
LINC00243-201ENST00000399196 USP32Q8NFA0 1604 aa12.62□□□□□ -0.39
LINC00243-201ENST00000399196 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.62□□□□□ -0.39
LINC00243-201ENST00000399196 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
LINC00243-201ENST00000399196 CD163L1Q9NR16 1453 aa12.61□□□□□ -0.39
LINC00243-201ENST00000399196 NUDCQ9Y266 331 aa12.61□□□□□ -0.39
LINC00243-201ENST00000399196 A0A1W2PP64 1363 aa12.6□□□□□ -0.39
LINC00243-201ENST00000399196 INSRP06213 1382 aa12.6□□□□□ -0.39
LINC00243-201ENST00000399196 NEFLP07196 543 aa12.6□□□□□ -0.39
LINC00243-201ENST00000399196 CABP1Q9NZU7 370 aa12.6□□□□□ -0.39
LINC00243-201ENST00000399196 MORC1Q86VD1 984 aa12.6□□□□□ -0.39
LINC00243-201ENST00000399196 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
LINC00243-201ENST00000399196 CDCA7LQ96GN5 454 aa12.58□□□□□ -0.4
LINC00243-201ENST00000399196 NALCNQ8IZF0 1738 aa12.58□□□□□ -0.4
LINC00243-201ENST00000399196 TNNT2P45379 298 aaPredicted RBP12.57□□□□□ -0.4
LINC00243-201ENST00000399196 NUDT16Q96DE0 195 aaKnown RBP12.57□□□□□ -0.4
LINC00243-201ENST00000399196 ZNF335Q9H4Z2 1342 aaPredicted RBP12.57□□□□□ -0.4
LINC00243-201ENST00000399196 NSD2O96028 1365 aa12.57□□□□□ -0.4
LINC00243-201ENST00000399196 SHPRHQ149N8 1683 aa12.57□□□□□ -0.4
LINC00243-201ENST00000399196 ADGRB2O60241 1585 aa12.56□□□□□ -0.4
LINC00243-201ENST00000399196 WDR43Q15061 677 aaKnown RBP eCLIP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms