RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 PNISRQ8TF01 805 aaKnown RBP20.51■□□□□ 0.87
COL25A1-201ENST00000399126 MINK1Q8N4C8 1332 aaPredicted RBP20.51■□□□□ 0.87
COL25A1-201ENST00000399126 CABP2Q9NPB3 220 aa20.5■□□□□ 0.87
COL25A1-201ENST00000399126 BRD4O60885 1362 aaPredicted RBP20.5■□□□□ 0.87
COL25A1-201ENST00000399126 METP08581 1390 aa20.5■□□□□ 0.87
COL25A1-201ENST00000399126 LTKP29376 864 aa20.49■□□□□ 0.87
COL25A1-201ENST00000399126 NLRP13Q86W25 1043 aa20.49■□□□□ 0.87
COL25A1-201ENST00000399126 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.49■□□□□ 0.87
COL25A1-201ENST00000399126 NLRP1Q9C000 1473 aa20.49■□□□□ 0.87
COL25A1-201ENST00000399126 POGKQ9P215 609 aa20.48■□□□□ 0.87
COL25A1-201ENST00000399126 EVC2Q86UK5 1308 aa20.48■□□□□ 0.87
COL25A1-201ENST00000399126 WAPLQ7Z5K2 1190 aa20.47■□□□□ 0.87
COL25A1-201ENST00000399126 BCANQ96GW7 911 aa20.47■□□□□ 0.87
COL25A1-201ENST00000399126 RIMS1Q86UR5 1692 aaKnown RBP20.47■□□□□ 0.87
COL25A1-201ENST00000399126 PLEKHH1Q9ULM0 1364 aa20.47■□□□□ 0.87
COL25A1-201ENST00000399126 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
COL25A1-201ENST00000399126 TAOK2Q9UL54 1235 aa20.46■□□□□ 0.87
COL25A1-201ENST00000399126 LRPPRCP42704 1394 aaKnown RBP20.44■□□□□ 0.86
COL25A1-201ENST00000399126 SRPK2P78362 688 aaKnown RBP20.43■□□□□ 0.86
COL25A1-201ENST00000399126 NSD3Q9BZ95 1437 aa20.42■□□□□ 0.86
COL25A1-201ENST00000399126 PPP2R1AP30153 589 aa20.41■□□□□ 0.86
COL25A1-201ENST00000399126 HDGFP51858 240 aaKnown RBP20.41■□□□□ 0.86
COL25A1-201ENST00000399126 TXNDC2Q86VQ3 553 aa20.41■□□□□ 0.86
COL25A1-201ENST00000399126 ADAMTS13Q76LX8 1427 aa20.41■□□□□ 0.86
COL25A1-201ENST00000399126 ABCC11Q96J66 1382 aa20.4■□□□□ 0.86
COL25A1-201ENST00000399126 DLC1Q96QB1 1528 aa20.4■□□□□ 0.86
COL25A1-201ENST00000399126 ZBED9Q6R2W3 1325 aa20.39■□□□□ 0.85
COL25A1-201ENST00000399126 SLC26A8Q96RN1 970 aa20.39■□□□□ 0.85
COL25A1-201ENST00000399126 NPC1L1Q9UHC9 1359 aa20.38■□□□□ 0.85
COL25A1-201ENST00000399126 ADAMTSL3P82987 1691 aa20.37■□□□□ 0.85
COL25A1-201ENST00000399126 CDK19Q9BWU1 502 aa20.37■□□□□ 0.85
COL25A1-201ENST00000399126 PLEKHG1Q9ULL1 1385 aa20.37■□□□□ 0.85
COL25A1-201ENST00000399126 SLIT1O75093 1534 aa20.37■□□□□ 0.85
COL25A1-201ENST00000399126 ARHGAP23Q9P227 1491 aa20.37■□□□□ 0.85
COL25A1-201ENST00000399126 PUS7Q96PZ0 661 aaKnown RBP20.36■□□□□ 0.85
COL25A1-201ENST00000399126 A0A1W2PP64 1363 aa20.34■□□□□ 0.85
COL25A1-201ENST00000399126 ANKRD36BQ8N2N9 1353 aa20.34■□□□□ 0.85
COL25A1-201ENST00000399126 EID1Q9Y6B2 187 aa20.34■□□□□ 0.85
COL25A1-201ENST00000399126 KNDC1Q76NI1 1749 aa20.34■□□□□ 0.85
COL25A1-201ENST00000399126 CEP170BQ9Y4F5 1589 aaPredicted RBP20.33■□□□□ 0.85
COL25A1-201ENST00000399126 THEMISQ8N1K5 641 aaPredicted RBP20.33■□□□□ 0.84
COL25A1-201ENST00000399126 ROBO2Q9HCK4 1378 aa20.33■□□□□ 0.84
COL25A1-201ENST00000399126 TNNT2P45379 298 aaPredicted RBP20.32■□□□□ 0.84
COL25A1-201ENST00000399126 TECPR2O15040 1411 aa20.32■□□□□ 0.84
COL25A1-201ENST00000399126 CD163L1Q9NR16 1453 aa20.32■□□□□ 0.84
COL25A1-201ENST00000399126 ATAD2Q6PL18 1390 aa20.31■□□□□ 0.84
COL25A1-201ENST00000399126 MED14O60244 1454 aa20.31■□□□□ 0.84
COL25A1-201ENST00000399126 CPS1P31327 1500 aa20.31■□□□□ 0.84
COL25A1-201ENST00000399126 PTPRUQ92729 1446 aa20.31■□□□□ 0.84
COL25A1-201ENST00000399126 CABP1Q9NZU7 370 aa20.3■□□□□ 0.84
COL25A1-201ENST00000399126 SALL2Q9Y467 1007 aaPredicted RBP20.3■□□□□ 0.84
COL25A1-201ENST00000399126 USP32Q8NFA0 1604 aa20.29■□□□□ 0.84
COL25A1-201ENST00000399126 FAM135BQ49AJ0 1406 aa20.28■□□□□ 0.84
COL25A1-201ENST00000399126 CGNL1Q0VF96 1302 aa20.28■□□□□ 0.84
COL25A1-201ENST00000399126 NCKAP5LQ9HCH0 1330 aa20.28■□□□□ 0.84
COL25A1-201ENST00000399126 MORC1Q86VD1 984 aa20.28■□□□□ 0.84
COL25A1-201ENST00000399126 ADAMTS8Q9UP79 889 aa20.27■□□□□ 0.84
COL25A1-201ENST00000399126 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.84
COL25A1-201ENST00000399126 WASLO00401 505 aaPredicted RBP20.26■□□□□ 0.83
COL25A1-201ENST00000399126 NINLQ9Y2I6 1382 aa20.26■□□□□ 0.83
COL25A1-201ENST00000399126 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.25■□□□□ 0.83
COL25A1-201ENST00000399126 BLMP54132 1417 aaPredicted RBP20.24■□□□□ 0.83
COL25A1-201ENST00000399126 SIRT1Q96EB6 747 aa20.23■□□□□ 0.83
COL25A1-201ENST00000399126 GGNBP2Q9H3C7 697 aa20.23■□□□□ 0.83
COL25A1-201ENST00000399126 AMOTL2Q9Y2J4 779 aa20.23■□□□□ 0.83
COL25A1-201ENST00000399126 SETD1BQ9UPS6 1966 aaKnown RBP20.23■□□□□ 0.83
COL25A1-201ENST00000399126 FKBP8Q14318 412 aa20.23■□□□□ 0.83
COL25A1-201ENST00000399126 TERF2IPQ9NYB0 399 aa20.23■□□□□ 0.83
COL25A1-201ENST00000399126 ZNF142P52746 1687 aaPredicted RBP20.22■□□□□ 0.83
COL25A1-201ENST00000399126 TBX22Q9Y458 520 aa20.22■□□□□ 0.83
COL25A1-201ENST00000399126 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.83
COL25A1-201ENST00000399126 NUTM2FA1L443 756 aa20.2■□□□□ 0.82
COL25A1-201ENST00000399126 PRR36Q9H6K5 1346 aa20.2■□□□□ 0.82
COL25A1-201ENST00000399126 PPIP5K1Q6PFW1 1433 aa20.2■□□□□ 0.82
COL25A1-201ENST00000399126 HDGFL2Q7Z4V5 671 aaPredicted RBP20.2■□□□□ 0.82
COL25A1-201ENST00000399126 NUDT16Q96DE0 195 aaKnown RBP20.2■□□□□ 0.82
COL25A1-201ENST00000399126 FYB1O15117 783 aa20.19■□□□□ 0.82
COL25A1-201ENST00000399126 TPRNQ4KMQ1 711 aa20.19■□□□□ 0.82
COL25A1-201ENST00000399126 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
COL25A1-201ENST00000399126 ATP7BP35670 1465 aa20.17■□□□□ 0.82
COL25A1-201ENST00000399126 NSD2O96028 1365 aa20.17■□□□□ 0.82
COL25A1-201ENST00000399126 IRX6P78412 446 aaPredicted RBP20.17■□□□□ 0.82
COL25A1-201ENST00000399126 MTHFSP49914 203 aa20.17■□□□□ 0.82
COL25A1-201ENST00000399126 CCDC146Q8IYE0 955 aa20.17■□□□□ 0.82
COL25A1-201ENST00000399126 DIP2AQ14689 1571 aa20.16■□□□□ 0.82
COL25A1-201ENST00000399126 SMG6Q86US8 1419 aaKnown RBP20.16■□□□□ 0.82
COL25A1-201ENST00000399126 POLR3AO14802 1390 aaPredicted RBP20.15■□□□□ 0.82
COL25A1-201ENST00000399126 XRN1Q8IZH2 1706 aaKnown RBP20.15■□□□□ 0.82
COL25A1-201ENST00000399126 SHPRHQ149N8 1683 aa20.15■□□□□ 0.82
COL25A1-201ENST00000399126 KIF20BQ96Q89 1820 aa20.15■□□□□ 0.82
COL25A1-201ENST00000399126 ADGRB2O60241 1585 aa20.15■□□□□ 0.82
COL25A1-201ENST00000399126 KCNA6P17658 529 aa20.15■□□□□ 0.82
COL25A1-201ENST00000399126 ANKLE2Q86XL3 938 aa20.15■□□□□ 0.82
COL25A1-201ENST00000399126 ANKRD26Q9UPS8 1709 aa20.14■□□□□ 0.82
COL25A1-201ENST00000399126 NUDCQ9Y266 331 aa20.14■□□□□ 0.82
COL25A1-201ENST00000399126 CCDC61Q9Y6R9 512 aa20.14■□□□□ 0.82
COL25A1-201ENST00000399126 INSRP06213 1382 aa20.14■□□□□ 0.81
COL25A1-201ENST00000399126 UBE2Q2Q8WVN8 375 aa20.14■□□□□ 0.81
COL25A1-201ENST00000399126 CPSF1Q10570 1443 aaKnown RBP20.13■□□□□ 0.81
COL25A1-201ENST00000399126 PTCH1Q13635 1447 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms