RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 ADAMTS13Q76LX8 1427 aa12.29□□□□□ -0.44
BRCC3-205ENST00000399026 CPS1P31327 1500 aa12.29□□□□□ -0.44
BRCC3-205ENST00000399026 BCANQ96GW7 911 aa12.29□□□□□ -0.44
BRCC3-205ENST00000399026 SLC26A8Q96RN1 970 aa12.28□□□□□ -0.44
BRCC3-205ENST00000399026 CHD2O14647 1828 aaKnown RBP12.27□□□□□ -0.44
BRCC3-205ENST00000399026 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.44
BRCC3-205ENST00000399026 NUBP1P53384 320 aa12.27□□□□□ -0.45
BRCC3-205ENST00000399026 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.27□□□□□ -0.45
BRCC3-205ENST00000399026 DHX57Q6P158 1386 aaKnown RBP12.27□□□□□ -0.45
BRCC3-205ENST00000399026 XRN1Q8IZH2 1706 aaKnown RBP12.26□□□□□ -0.45
BRCC3-205ENST00000399026 RGL3Q3MIN7 710 aa12.26□□□□□ -0.45
BRCC3-205ENST00000399026 CERKQ8TCT0 537 aa12.25□□□□□ -0.45
BRCC3-205ENST00000399026 LRRC7Q96NW7 1537 aa12.25□□□□□ -0.45
BRCC3-205ENST00000399026 NKTRP30414 1462 aaKnown RBP12.24□□□□□ -0.45
BRCC3-205ENST00000399026 VASPP50552 380 aaPredicted RBP12.24□□□□□ -0.45
BRCC3-205ENST00000399026 HDGFP51858 240 aaKnown RBP12.24□□□□□ -0.45
BRCC3-205ENST00000399026 MYOM2P54296 1465 aa12.24□□□□□ -0.45
BRCC3-205ENST00000399026 MS4A3Q96HJ5 214 aa12.24□□□□□ -0.45
BRCC3-205ENST00000399026 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
BRCC3-205ENST00000399026 ALKQ9UM73 1620 aa12.24□□□□□ -0.45
BRCC3-205ENST00000399026 ASXL1Q8IXJ9 1541 aa12.23□□□□□ -0.45
BRCC3-205ENST00000399026 KIF12Q96FN5 646 aa12.23□□□□□ -0.45
BRCC3-205ENST00000399026 IQSEC2Q5JU85 1478 aa12.22□□□□□ -0.45
BRCC3-205ENST00000399026 PIK3C2GO75747 1445 aa12.22□□□□□ -0.45
BRCC3-205ENST00000399026 PTPRUQ92729 1446 aa12.22□□□□□ -0.45
BRCC3-205ENST00000399026 LAMC1P11047 1609 aa12.22□□□□□ -0.45
BRCC3-205ENST00000399026 RPGRIP1LQ68CZ1 1315 aa12.21□□□□□ -0.45
BRCC3-205ENST00000399026 ADGRF5Q8IZF2 1346 aa12.21□□□□□ -0.45
BRCC3-205ENST00000399026 NRXN1Q9ULB1 1477 aa12.21□□□□□ -0.46
BRCC3-205ENST00000399026 METP08581 1390 aa12.2□□□□□ -0.46
BRCC3-205ENST00000399026 PLSCR2Q9NRY7 297 aa12.2□□□□□ -0.46
BRCC3-205ENST00000399026 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
BRCC3-205ENST00000399026 KNDC1Q76NI1 1749 aa12.18□□□□□ -0.46
BRCC3-205ENST00000399026 NALCNQ8IZF0 1738 aa12.18□□□□□ -0.46
BRCC3-205ENST00000399026 KCNA6P17658 529 aa12.18□□□□□ -0.46
BRCC3-205ENST00000399026 RBM33Q96EV2 1170 aaKnown RBP12.18□□□□□ -0.46
BRCC3-205ENST00000399026 TBX22Q9Y458 520 aa12.18□□□□□ -0.46
BRCC3-205ENST00000399026 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
BRCC3-205ENST00000399026 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
BRCC3-205ENST00000399026 MAP3K13O43283 966 aa12.17□□□□□ -0.46
BRCC3-205ENST00000399026 SIN3AQ96ST3 1273 aa12.16□□□□□ -0.46
BRCC3-205ENST00000399026 PTCH1Q13635 1447 aa12.14□□□□□ -0.47
BRCC3-205ENST00000399026 NEUROD1Q13562 356 aa12.14□□□□□ -0.47
BRCC3-205ENST00000399026 ILDR1Q86SU0 546 aaPredicted RBP12.14□□□□□ -0.47
BRCC3-205ENST00000399026 PROSER2Q86WR7 435 aaPredicted RBP12.14□□□□□ -0.47
BRCC3-205ENST00000399026 DCAF11Q8TEB1 546 aa12.14□□□□□ -0.47
BRCC3-205ENST00000399026 FBXO41Q8TF61 875 aa12.14□□□□□ -0.47
BRCC3-205ENST00000399026 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
BRCC3-205ENST00000399026 AMOTL2Q9Y2J4 779 aa12.14□□□□□ -0.47
BRCC3-205ENST00000399026 KDM2AQ9Y2K7 1162 aa12.14□□□□□ -0.47
BRCC3-205ENST00000399026 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.14□□□□□ -0.47
BRCC3-205ENST00000399026 ADGRB1O14514 1584 aa12.13□□□□□ -0.47
BRCC3-205ENST00000399026 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
BRCC3-205ENST00000399026 KLHL34Q8N239 644 aa12.13□□□□□ -0.47
BRCC3-205ENST00000399026 KIAA1210Q9ULL0 1709 aa12.12□□□□□ -0.47
BRCC3-205ENST00000399026 UBAP1LF5GYI3 381 aa12.12□□□□□ -0.47
BRCC3-205ENST00000399026 ROBO2Q9HCK4 1378 aa12.12□□□□□ -0.47
BRCC3-205ENST00000399026 PRAG1Q86YV5 1406 aa12.11□□□□□ -0.47
BRCC3-205ENST00000399026 CFAP70Q5T0N1 1121 aa12.11□□□□□ -0.47
BRCC3-205ENST00000399026 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
BRCC3-205ENST00000399026 TMEM132EQ6IEE7 984 aa12.11□□□□□ -0.47
BRCC3-205ENST00000399026 ARHGEF28Q8N1W1 1705 aaKnown RBP12.11□□□□□ -0.47
BRCC3-205ENST00000399026 TRPM1Q7Z4N2 1603 aa12.11□□□□□ -0.47
BRCC3-205ENST00000399026 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
BRCC3-205ENST00000399026 ROBO1Q9Y6N7 1651 aa12.1□□□□□ -0.47
BRCC3-205ENST00000399026 MSH6P52701 1360 aa12.1□□□□□ -0.47
BRCC3-205ENST00000399026 ATMINO43313 823 aaPredicted RBP12.1□□□□□ -0.47
BRCC3-205ENST00000399026 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
BRCC3-205ENST00000399026 TECPR2O15040 1411 aa12.1□□□□□ -0.47
BRCC3-205ENST00000399026 ADGRL3Q9HAR2 1447 aa12.1□□□□□ -0.47
BRCC3-205ENST00000399026 LRPPRCP42704 1394 aaKnown RBP12.09□□□□□ -0.47
BRCC3-205ENST00000399026 DCAF8Q5TAQ9 597 aa12.09□□□□□ -0.47
BRCC3-205ENST00000399026 STK26Q9P289 416 aa12.09□□□□□ -0.47
BRCC3-205ENST00000399026 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
BRCC3-205ENST00000399026 PLEKHH1Q9ULM0 1364 aa12.08□□□□□ -0.48
BRCC3-205ENST00000399026 PIP4K2BP78356 416 aa12.08□□□□□ -0.48
BRCC3-205ENST00000399026 L3MBTL2Q969R5 705 aa12.08□□□□□ -0.48
BRCC3-205ENST00000399026 C14orf93Q9H972 538 aaKnown RBP12.08□□□□□ -0.48
BRCC3-205ENST00000399026 TONSLQ96HA7 1378 aa12.07□□□□□ -0.48
BRCC3-205ENST00000399026 CDC42BPGQ6DT37 1551 aa12.07□□□□□ -0.48
BRCC3-205ENST00000399026 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
BRCC3-205ENST00000399026 NCOA3Q9Y6Q9 1424 aa12.06□□□□□ -0.48
BRCC3-205ENST00000399026 SGIP1Q9BQI5 828 aa12.06□□□□□ -0.48
BRCC3-205ENST00000399026 PCDHB13Q9Y5F0 798 aa12.06□□□□□ -0.48
BRCC3-205ENST00000399026 DCCP43146 1447 aa12.05□□□□□ -0.48
BRCC3-205ENST00000399026 TOM1O60784 492 aa12.05□□□□□ -0.48
BRCC3-205ENST00000399026 IFNLR1Q8IU57 520 aaPredicted RBP12.05□□□□□ -0.48
BRCC3-205ENST00000399026 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
BRCC3-205ENST00000399026 FMN2Q9NZ56 1722 aa12.05□□□□□ -0.48
BRCC3-205ENST00000399026 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
BRCC3-205ENST00000399026 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
BRCC3-205ENST00000399026 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
BRCC3-205ENST00000399026 MST1RQ04912 1400 aa12.03□□□□□ -0.48
BRCC3-205ENST00000399026 ATN1P54259 1190 aaPredicted RBP12.03□□□□□ -0.48
BRCC3-205ENST00000399026 WAPLQ7Z5K2 1190 aa12.03□□□□□ -0.48
BRCC3-205ENST00000399026 ADGRB2O60241 1585 aa12.03□□□□□ -0.48
BRCC3-205ENST00000399026 QRICH2Q9H0J4 1663 aa12.03□□□□□ -0.48
BRCC3-205ENST00000399026 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
BRCC3-205ENST00000399026 SAFB2Q14151 953 aaKnown RBP eCLIP12.02□□□□□ -0.49
BRCC3-205ENST00000399026 STAC3Q96MF2 364 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms