RNA–Protein interactions for RNA: ENST00000398646.3

FAM3B-202, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 5 BASIC

Gene FAM3B, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-202ENST00000398646 ABCC11Q96J66 1382 aa13.4□□□□□ -0.26
FAM3B-202ENST00000398646 ADAMTS13Q76LX8 1427 aa13.39□□□□□ -0.27
FAM3B-202ENST00000398646 ZNF142P52746 1687 aaPredicted RBP13.39□□□□□ -0.27
FAM3B-202ENST00000398646 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
FAM3B-202ENST00000398646 PUS7Q96PZ0 661 aaKnown RBP13.38□□□□□ -0.27
FAM3B-202ENST00000398646 MINK1Q8N4C8 1332 aaPredicted RBP13.38□□□□□ -0.27
FAM3B-202ENST00000398646 SIRT1Q96EB6 747 aa13.37□□□□□ -0.27
FAM3B-202ENST00000398646 SLC26A8Q96RN1 970 aa13.37□□□□□ -0.27
FAM3B-202ENST00000398646 TBX22Q9Y458 520 aa13.37□□□□□ -0.27
FAM3B-202ENST00000398646 PER1O15534 1290 aaPredicted RBP13.36□□□□□ -0.27
FAM3B-202ENST00000398646 WAPLQ7Z5K2 1190 aa13.36□□□□□ -0.27
FAM3B-202ENST00000398646 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
FAM3B-202ENST00000398646 KNSTRNQ9Y448 316 aa13.36□□□□□ -0.27
FAM3B-202ENST00000398646 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
FAM3B-202ENST00000398646 MED14O60244 1454 aa13.36□□□□□ -0.27
FAM3B-202ENST00000398646 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
FAM3B-202ENST00000398646 TULP4Q9NRJ4 1543 aa13.35□□□□□ -0.27
FAM3B-202ENST00000398646 RALBP1Q15311 655 aa13.35□□□□□ -0.27
FAM3B-202ENST00000398646 MYOM1P52179 1685 aa13.34□□□□□ -0.27
FAM3B-202ENST00000398646 DIP2AQ14689 1571 aa13.34□□□□□ -0.27
FAM3B-202ENST00000398646 TECPR2O15040 1411 aa13.34□□□□□ -0.27
FAM3B-202ENST00000398646 CENPBP07199 599 aaPredicted RBP13.34□□□□□ -0.27
FAM3B-202ENST00000398646 SRPK2P78362 688 aaKnown RBP13.34□□□□□ -0.27
FAM3B-202ENST00000398646 CABP2Q9NPB3 220 aa13.34□□□□□ -0.27
FAM3B-202ENST00000398646 PLEKHH1Q9ULM0 1364 aa13.33□□□□□ -0.27
FAM3B-202ENST00000398646 FAM135BQ49AJ0 1406 aa13.33□□□□□ -0.28
FAM3B-202ENST00000398646 CPS1P31327 1500 aa13.33□□□□□ -0.28
FAM3B-202ENST00000398646 CDK19Q9BWU1 502 aa13.32□□□□□ -0.28
FAM3B-202ENST00000398646 AMOTL2Q9Y2J4 779 aa13.32□□□□□ -0.28
FAM3B-202ENST00000398646 PTPRUQ92729 1446 aa13.31□□□□□ -0.28
FAM3B-202ENST00000398646 CC2D1BQ5T0F9 858 aaKnown RBP13.31□□□□□ -0.28
FAM3B-202ENST00000398646 SLC12A5Q9H2X9 1139 aa13.31□□□□□ -0.28
FAM3B-202ENST00000398646 MRS2Q9HD23 443 aa13.31□□□□□ -0.28
FAM3B-202ENST00000398646 ATAD2Q6PL18 1390 aa13.31□□□□□ -0.28
FAM3B-202ENST00000398646 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
FAM3B-202ENST00000398646 PIK3R4Q99570 1358 aa13.3□□□□□ -0.28
FAM3B-202ENST00000398646 ROBO2Q9HCK4 1378 aa13.3□□□□□ -0.28
FAM3B-202ENST00000398646 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
FAM3B-202ENST00000398646 CCDC184Q52MB2 194 aa13.29□□□□□ -0.28
FAM3B-202ENST00000398646 PARD3Q8TEW0 1356 aa13.29□□□□□ -0.28
FAM3B-202ENST00000398646 NINLQ9Y2I6 1382 aa13.29□□□□□ -0.28
FAM3B-202ENST00000398646 KDM4FA0A1W2PPD8 638 aa13.28□□□□□ -0.28
FAM3B-202ENST00000398646 NPHP4O75161 1426 aaPredicted RBP13.28□□□□□ -0.28
FAM3B-202ENST00000398646 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
FAM3B-202ENST00000398646 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.29
FAM3B-202ENST00000398646 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
FAM3B-202ENST00000398646 ANKRD36BQ8N2N9 1353 aa13.27□□□□□ -0.29
FAM3B-202ENST00000398646 NPC1L1Q9UHC9 1359 aa13.27□□□□□ -0.29
FAM3B-202ENST00000398646 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
FAM3B-202ENST00000398646 PTCH1Q13635 1447 aa13.26□□□□□ -0.29
FAM3B-202ENST00000398646 NSD3Q9BZ95 1437 aa13.26□□□□□ -0.29
FAM3B-202ENST00000398646 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
FAM3B-202ENST00000398646 HDGFL2Q7Z4V5 671 aaPredicted RBP13.25□□□□□ -0.29
FAM3B-202ENST00000398646 TERF2IPQ9NYB0 399 aa13.25□□□□□ -0.29
FAM3B-202ENST00000398646 NLRP13Q86W25 1043 aa13.24□□□□□ -0.29
FAM3B-202ENST00000398646 FAM9BQ8IZU0 186 aa13.24□□□□□ -0.29
FAM3B-202ENST00000398646 CABP1Q9NZU7 370 aa13.24□□□□□ -0.29
FAM3B-202ENST00000398646 XRN1Q8IZH2 1706 aaKnown RBP13.23□□□□□ -0.29
FAM3B-202ENST00000398646 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.23□□□□□ -0.29
FAM3B-202ENST00000398646 KCNA6P17658 529 aa13.23□□□□□ -0.29
FAM3B-202ENST00000398646 NUDT16Q96DE0 195 aaKnown RBP13.23□□□□□ -0.29
FAM3B-202ENST00000398646 CGNL1Q0VF96 1302 aa13.22□□□□□ -0.29
FAM3B-202ENST00000398646 ADGRB2O60241 1585 aa13.22□□□□□ -0.29
FAM3B-202ENST00000398646 A0A1W2PP64 1363 aa13.21□□□□□ -0.29
FAM3B-202ENST00000398646 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.29
FAM3B-202ENST00000398646 MORC1Q86VD1 984 aa13.21□□□□□ -0.29
FAM3B-202ENST00000398646 PPP2R1AP30153 589 aa13.2□□□□□ -0.3
FAM3B-202ENST00000398646 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
FAM3B-202ENST00000398646 PPIP5K1Q6PFW1 1433 aa13.2□□□□□ -0.3
FAM3B-202ENST00000398646 USP32Q8NFA0 1604 aa13.2□□□□□ -0.3
FAM3B-202ENST00000398646 NSD2O96028 1365 aa13.2□□□□□ -0.3
FAM3B-202ENST00000398646 ATP7BP35670 1465 aa13.19□□□□□ -0.3
FAM3B-202ENST00000398646 CD163L1Q9NR16 1453 aa13.19□□□□□ -0.3
FAM3B-202ENST00000398646 PNISRQ8TF01 805 aaKnown RBP13.19□□□□□ -0.3
FAM3B-202ENST00000398646 HSPA2P54652 639 aa13.18□□□□□ -0.3
FAM3B-202ENST00000398646 PRR36Q9H6K5 1346 aa13.17□□□□□ -0.3
FAM3B-202ENST00000398646 NUTM2FA1L443 756 aa13.17□□□□□ -0.3
FAM3B-202ENST00000398646 HNRNPUQ00839 825 aaKnown RBP eCLIP13.17□□□□□ -0.3
FAM3B-202ENST00000398646 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
FAM3B-202ENST00000398646 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.3
FAM3B-202ENST00000398646 CPSF1Q10570 1443 aaKnown RBP13.14□□□□□ -0.31
FAM3B-202ENST00000398646 PLEKHG3A1L390 1219 aa13.14□□□□□ -0.31
FAM3B-202ENST00000398646 GGNBP2Q9H3C7 697 aa13.14□□□□□ -0.31
FAM3B-202ENST00000398646 LMTK3Q96Q04 1460 aa13.14□□□□□ -0.31
FAM3B-202ENST00000398646 NWD1Q149M9 1564 aa13.13□□□□□ -0.31
FAM3B-202ENST00000398646 FYB1O15117 783 aa13.13□□□□□ -0.31
FAM3B-202ENST00000398646 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
FAM3B-202ENST00000398646 C14orf37Q86TY3 774 aa13.13□□□□□ -0.31
FAM3B-202ENST00000398646 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
FAM3B-202ENST00000398646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.13□□□□□ -0.311e-6■■□□□ 14.2
FAM3B-202ENST00000398646 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
FAM3B-202ENST00000398646 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
FAM3B-202ENST00000398646 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
FAM3B-202ENST00000398646 RBM33Q96EV2 1170 aaKnown RBP13.12□□□□□ -0.31
FAM3B-202ENST00000398646 ITSN1Q15811 1721 aa13.12□□□□□ -0.31
FAM3B-202ENST00000398646 ACEP12821 1306 aa13.12□□□□□ -0.31
FAM3B-202ENST00000398646 WDR43Q15061 677 aaKnown RBP eCLIP13.11□□□□□ -0.31
FAM3B-202ENST00000398646 AKAP12Q02952 1782 aa13.11□□□□□ -0.31
FAM3B-202ENST00000398646 ADGRL3Q9HAR2 1447 aa13.11□□□□□ -0.31
FAM3B-202ENST00000398646 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms