RNA–Protein interactions for RNA: ENST00000398646.3

FAM3B-202, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 5 BASIC

Gene FAM3B, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-202ENST00000398646 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
FAM3B-202ENST00000398646 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
FAM3B-202ENST00000398646 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
FAM3B-202ENST00000398646 CCDC180Q9P1Z9 1646 aa19.39■□□□□ 0.69
FAM3B-202ENST00000398646 ZCCHC6Q5VYS8 1495 aaKnown RBP18.64■□□□□ 0.57
FAM3B-202ENST00000398646 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
FAM3B-202ENST00000398646 ABCC9O60706 1549 aa18.42■□□□□ 0.54
FAM3B-202ENST00000398646 DCAF1Q9Y4B6 1507 aa18.36■□□□□ 0.53
FAM3B-202ENST00000398646 MYO15BQ96JP2 1530 aa18.17■□□□□ 0.5
FAM3B-202ENST00000398646 SHROOM4Q9ULL8 1493 aa18.11■□□□□ 0.49
FAM3B-202ENST00000398646 NACADO15069 1562 aa18.09■□□□□ 0.49
FAM3B-202ENST00000398646 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
FAM3B-202ENST00000398646 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
FAM3B-202ENST00000398646 SCRIBQ14160 1630 aa17.83■□□□□ 0.45
FAM3B-202ENST00000398646 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
FAM3B-202ENST00000398646 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
FAM3B-202ENST00000398646 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
FAM3B-202ENST00000398646 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
FAM3B-202ENST00000398646 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
FAM3B-202ENST00000398646 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.34
FAM3B-202ENST00000398646 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
FAM3B-202ENST00000398646 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
FAM3B-202ENST00000398646 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
FAM3B-202ENST00000398646 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
FAM3B-202ENST00000398646 WIZO95785 1651 aa17.01■□□□□ 0.31
FAM3B-202ENST00000398646 EIF4G1Q04637 1599 aaKnown RBP16.88■□□□□ 0.29
FAM3B-202ENST00000398646 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
FAM3B-202ENST00000398646 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
FAM3B-202ENST00000398646 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
FAM3B-202ENST00000398646 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
FAM3B-202ENST00000398646 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
FAM3B-202ENST00000398646 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
FAM3B-202ENST00000398646 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
FAM3B-202ENST00000398646 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
FAM3B-202ENST00000398646 CC2D2AQ9P2K1 1620 aa16.65■□□□□ 0.26
FAM3B-202ENST00000398646 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
FAM3B-202ENST00000398646 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
FAM3B-202ENST00000398646 CFTRP13569 1480 aa16.3■□□□□ 0.2
FAM3B-202ENST00000398646 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
FAM3B-202ENST00000398646 ABCC8Q09428 1581 aa16.29■□□□□ 0.2
FAM3B-202ENST00000398646 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
FAM3B-202ENST00000398646 WRNQ14191 1432 aaPredicted RBP eCLIP16.21■□□□□ 0.19
FAM3B-202ENST00000398646 PRDM2Q13029 1718 aa16.2■□□□□ 0.18
FAM3B-202ENST00000398646 LAMC3Q9Y6N6 1575 aa16.14■□□□□ 0.17
FAM3B-202ENST00000398646 NESP48681 1621 aa16.13■□□□□ 0.17
FAM3B-202ENST00000398646 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
FAM3B-202ENST00000398646 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
FAM3B-202ENST00000398646 FAM9AQ8IZU1 332 aaPredicted RBP16.09■□□□□ 0.17
FAM3B-202ENST00000398646 TOP2BQ02880 1626 aa16.07■□□□□ 0.16
FAM3B-202ENST00000398646 BIVM-ERCC5R4GMW8 1640 aa16.05■□□□□ 0.16
FAM3B-202ENST00000398646 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
FAM3B-202ENST00000398646 CUX1P39880 1505 aa16.04■□□□□ 0.16
FAM3B-202ENST00000398646 CEP164Q9UPV0 1460 aa16.01■□□□□ 0.15
FAM3B-202ENST00000398646 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
FAM3B-202ENST00000398646 SOGA1O94964 1423 aa15.98■□□□□ 0.15
FAM3B-202ENST00000398646 FOXD1Q16676 465 aa15.98■□□□□ 0.15
FAM3B-202ENST00000398646 EEA1Q15075 1411 aa15.97■□□□□ 0.15
FAM3B-202ENST00000398646 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
FAM3B-202ENST00000398646 DNMBPQ6XZF7 1577 aa15.93■□□□□ 0.14
FAM3B-202ENST00000398646 RUSC2Q8N2Y8 1516 aa15.93■□□□□ 0.14
FAM3B-202ENST00000398646 TOPBP1Q92547 1522 aa15.91■□□□□ 0.14
FAM3B-202ENST00000398646 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
FAM3B-202ENST00000398646 FGD5Q6ZNL6 1462 aa15.9■□□□□ 0.14
FAM3B-202ENST00000398646 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
FAM3B-202ENST00000398646 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
FAM3B-202ENST00000398646 KIF27Q86VH2 1401 aa15.83■□□□□ 0.12
FAM3B-202ENST00000398646 ERCC6Q03468 1493 aa15.83■□□□□ 0.12
FAM3B-202ENST00000398646 MRC2Q9UBG0 1479 aa15.83■□□□□ 0.12
FAM3B-202ENST00000398646 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
FAM3B-202ENST00000398646 CUX2O14529 1486 aa15.79■□□□□ 0.12
FAM3B-202ENST00000398646 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
FAM3B-202ENST00000398646 ADRA2BP18089 450 aa15.77■□□□□ 0.12
FAM3B-202ENST00000398646 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
FAM3B-202ENST00000398646 GOLGA3Q08378 1498 aa15.75■□□□□ 0.11
FAM3B-202ENST00000398646 ABCA10Q8WWZ4 1543 aa15.74■□□□□ 0.11
FAM3B-202ENST00000398646 KIF21BO75037 1637 aa15.73■□□□□ 0.11
FAM3B-202ENST00000398646 WDR62O43379 1518 aa15.73■□□□□ 0.11
FAM3B-202ENST00000398646 UBTFP17480 764 aaKnown RBP15.71■□□□□ 0.11
FAM3B-202ENST00000398646 THOC2Q8NI27 1593 aaKnown RBP15.68■□□□□ 0.1
FAM3B-202ENST00000398646 IGF1RP08069 1367 aa15.68■□□□□ 0.1
FAM3B-202ENST00000398646 TNIKQ9UKE5 1360 aa15.68■□□□□ 0.1
FAM3B-202ENST00000398646 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
FAM3B-202ENST00000398646 PRXQ9BXM0 1461 aa15.67■□□□□ 0.1
FAM3B-202ENST00000398646 RAPGEF2Q9Y4G8 1499 aa15.65■□□□□ 0.1
FAM3B-202ENST00000398646 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
FAM3B-202ENST00000398646 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
FAM3B-202ENST00000398646 IFT140Q96RY7 1462 aa15.64■□□□□ 0.09
FAM3B-202ENST00000398646 TDRD9Q8NDG6 1382 aaKnown RBP15.63■□□□□ 0.09
FAM3B-202ENST00000398646 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
FAM3B-202ENST00000398646 GAPVD1Q14C86 1478 aa15.61■□□□□ 0.09
FAM3B-202ENST00000398646 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
FAM3B-202ENST00000398646 CEP162Q5TB80 1403 aa15.58■□□□□ 0.08
FAM3B-202ENST00000398646 CUL7Q14999 1698 aa15.56■□□□□ 0.08
FAM3B-202ENST00000398646 AQRO60306 1485 aaKnown RBP eCLIP15.55■□□□□ 0.08
FAM3B-202ENST00000398646 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.07
FAM3B-202ENST00000398646 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
FAM3B-202ENST00000398646 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
FAM3B-202ENST00000398646 CLIP1P30622 1438 aa15.49■□□□□ 0.07
FAM3B-202ENST00000398646 RANGAP1P46060 587 aaPredicted RBP15.48■□□□□ 0.07
FAM3B-202ENST00000398646 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms