RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 CCDC125Q86Z20 511 aa9.52□□□□□ -0.89
SMARCE1P6-201ENST00000398372 TRPC5Q9UL62 973 aaPredicted RBP9.52□□□□□ -0.89
SMARCE1P6-201ENST00000398372 RIMS2Q9UQ26 1411 aa9.52□□□□□ -0.89
SMARCE1P6-201ENST00000398372 FNBP4Q8N3X1 1017 aaPredicted RBP9.51□□□□□ -0.89
SMARCE1P6-201ENST00000398372 PSDA5PKW4 1024 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1P6-201ENST00000398372 PPP1R15AO75807 674 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1P6-201ENST00000398372 AMOTL2Q9Y2J4 779 aa9.5□□□□□ -0.89
SMARCE1P6-201ENST00000398372 UNC13BO14795 1591 aa9.5□□□□□ -0.89
SMARCE1P6-201ENST00000398372 TMEM131LA2VDJ0 1609 aa9.49□□□□□ -0.89
SMARCE1P6-201ENST00000398372 GCC2Q8IWJ2 1684 aa9.49□□□□□ -0.89
SMARCE1P6-201ENST00000398372 RRBP1Q9P2E9 1410 aaKnown RBP9.48□□□□□ -0.89
SMARCE1P6-201ENST00000398372 BCL9LQ86UU0 1499 aa9.48□□□□□ -0.89
SMARCE1P6-201ENST00000398372 SLC52A1Q9NWF4 448 aa9.48□□□□□ -0.89
SMARCE1P6-201ENST00000398372 BRWD3Q6RI45 1802 aa9.47□□□□□ -0.89
SMARCE1P6-201ENST00000398372 BLMP54132 1417 aaPredicted RBP9.47□□□□□ -0.89
SMARCE1P6-201ENST00000398372 RPRD2Q5VT52 1461 aaKnown RBP9.47□□□□□ -0.89
SMARCE1P6-201ENST00000398372 E9PCH4 1651 aa9.46□□□□□ -0.89
SMARCE1P6-201ENST00000398372 FBXO3Q9UK99 471 aa9.46□□□□□ -0.9
SMARCE1P6-201ENST00000398372 NUP155O75694 1391 aa9.46□□□□□ -0.9
SMARCE1P6-201ENST00000398372 DCCP43146 1447 aa9.46□□□□□ -0.9
SMARCE1P6-201ENST00000398372 TRPM2O94759 1503 aa9.46□□□□□ -0.9
SMARCE1P6-201ENST00000398372 IQGAP3Q86VI3 1631 aa9.45□□□□□ -0.9
SMARCE1P6-201ENST00000398372 GJD4Q96KN9 370 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1P6-201ENST00000398372 SPINK5Q9NQ38 1064 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1P6-201ENST00000398372 PIK3R4Q99570 1358 aa9.45□□□□□ -0.9
SMARCE1P6-201ENST00000398372 CHGAP10645 457 aaKnown RBP9.44□□□□□ -0.9
SMARCE1P6-201ENST00000398372 PRKCSHP14314 528 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1P6-201ENST00000398372 HDGFP51858 240 aaKnown RBP9.44□□□□□ -0.9
SMARCE1P6-201ENST00000398372 ORAI2Q96SN7 254 aa9.44□□□□□ -0.9
SMARCE1P6-201ENST00000398372 XRN1Q8IZH2 1706 aaKnown RBP9.44□□□□□ -0.9
SMARCE1P6-201ENST00000398372 LAMC1P11047 1609 aa9.43□□□□□ -0.9
SMARCE1P6-201ENST00000398372 GLI3P10071 1580 aa9.43□□□□□ -0.9
SMARCE1P6-201ENST00000398372 PTCH1Q13635 1447 aa9.43□□□□□ -0.9
SMARCE1P6-201ENST00000398372 SOS2Q07890 1332 aaPredicted RBP9.43□□□□□ -0.9
SMARCE1P6-201ENST00000398372 CAPN15O75808 1086 aa9.43□□□□□ -0.9
SMARCE1P6-201ENST00000398372 YY1P25490 414 aa9.43□□□□□ -0.9
SMARCE1P6-201ENST00000398372 NALCNQ8IZF0 1738 aa9.42□□□□□ -0.9
SMARCE1P6-201ENST00000398372 C1orf167Q5SNV9 1468 aa9.42□□□□□ -0.9
SMARCE1P6-201ENST00000398372 SAMD1Q6SPF0 538 aaPredicted RBP9.42□□□□□ -0.9
SMARCE1P6-201ENST00000398372 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMARCE1P6-201ENST00000398372 MARF1Q9Y4F3 1742 aaKnown RBP9.42□□□□□ -0.9
SMARCE1P6-201ENST00000398372 COL22A1Q8NFW1 1626 aaPredicted RBP9.42□□□□□ -0.9
SMARCE1P6-201ENST00000398372 NRXN3Q9Y4C0 1643 aa9.42□□□□□ -0.9
SMARCE1P6-201ENST00000398372 NAIPQ13075 1403 aa9.41□□□□□ -0.9
SMARCE1P6-201ENST00000398372 METP08581 1390 aa9.41□□□□□ -0.9
SMARCE1P6-201ENST00000398372 CENPBP07199 599 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1P6-201ENST00000398372 U3KPZ7 1027 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1P6-201ENST00000398372 MYOM2P54296 1465 aa9.4□□□□□ -0.9
SMARCE1P6-201ENST00000398372 RALGAPBQ86X10 1494 aa9.4□□□□□ -0.9
SMARCE1P6-201ENST00000398372 IFFO2Q5TF58 517 aa9.4□□□□□ -0.9
SMARCE1P6-201ENST00000398372 CCER1Q8TC90 406 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1P6-201ENST00000398372 ADGRL3Q9HAR2 1447 aa9.39□□□□□ -0.91
SMARCE1P6-201ENST00000398372 SPHKAPQ2M3C7 1700 aa9.39□□□□□ -0.91
SMARCE1P6-201ENST00000398372 SF3B2Q13435 895 aaKnown RBP9.39□□□□□ -0.91
SMARCE1P6-201ENST00000398372 R3HDM1Q15032 1099 aaKnown RBP9.39□□□□□ -0.91
SMARCE1P6-201ENST00000398372 SEPT12Q8IYM1 358 aa9.39□□□□□ -0.91
SMARCE1P6-201ENST00000398372 HFM1A2PYH4 1435 aa9.38□□□□□ -0.91
SMARCE1P6-201ENST00000398372 CLSPNQ9HAW4 1339 aa9.37□□□□□ -0.91
SMARCE1P6-201ENST00000398372 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.37□□□□□ -0.91
SMARCE1P6-201ENST00000398372 XPCQ01831 940 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1P6-201ENST00000398372 UNC5CLQ8IV45 518 aa9.37□□□□□ -0.91
SMARCE1P6-201ENST00000398372 EN1Q05925 392 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1P6-201ENST00000398372 BCL11AQ9H165 835 aa9.35□□□□□ -0.91
SMARCE1P6-201ENST00000398372 KIF1BO60333 1816 aa9.35□□□□□ -0.91
SMARCE1P6-201ENST00000398372 SLIT2O94813 1529 aa9.35□□□□□ -0.91
SMARCE1P6-201ENST00000398372 CLTCL1P53675 1640 aa9.34□□□□□ -0.91
SMARCE1P6-201ENST00000398372 PXDNQ92626 1479 aa9.34□□□□□ -0.91
SMARCE1P6-201ENST00000398372 ONECUT3O60422 494 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1P6-201ENST00000398372 PLCB2Q00722 1185 aa9.34□□□□□ -0.91
SMARCE1P6-201ENST00000398372 ZNF326Q5BKZ1 582 aaKnown RBP9.34□□□□□ -0.91
SMARCE1P6-201ENST00000398372 FAM182BQ5T319 152 aa9.34□□□□□ -0.91
SMARCE1P6-201ENST00000398372 KRT27Q7Z3Y8 459 aa9.34□□□□□ -0.91
SMARCE1P6-201ENST00000398372 BAG6P46379 1132 aa9.33□□□□□ -0.92
SMARCE1P6-201ENST00000398372 FOXO3O43524 673 aa9.32□□□□□ -0.92
SMARCE1P6-201ENST00000398372 ROBO2Q9HCK4 1378 aa9.32□□□□□ -0.92
SMARCE1P6-201ENST00000398372 VPS72Q15906 364 aa9.31□□□□□ -0.92
SMARCE1P6-201ENST00000398372 EZH2Q15910 746 aaKnown RBP9.31□□□□□ -0.92
SMARCE1P6-201ENST00000398372 CAMTA1Q9Y6Y1 1673 aa9.3□□□□□ -0.92
SMARCE1P6-201ENST00000398372 ESCO1Q5FWF5 840 aa9.3□□□□□ -0.92
SMARCE1P6-201ENST00000398372 SENP3-EIF4A1A0A087X0R7 540 aa9.29□□□□□ -0.92
SMARCE1P6-201ENST00000398372 PLEKHG5O94827 1062 aa9.29□□□□□ -0.92
SMARCE1P6-201ENST00000398372 CABLES1Q8TDN4 633 aa9.29□□□□□ -0.92
SMARCE1P6-201ENST00000398372 MPHOSPH9Q99550 1183 aa9.29□□□□□ -0.92
SMARCE1P6-201ENST00000398372 NEXMIFQ5QGS0 1516 aa9.29□□□□□ -0.92
SMARCE1P6-201ENST00000398372 NPHP3Q7Z494 1330 aa9.29□□□□□ -0.92
SMARCE1P6-201ENST00000398372 TNS1Q9HBL0 1735 aaKnown RBP9.28□□□□□ -0.92
SMARCE1P6-201ENST00000398372 ZNF784Q8NCA9 323 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1P6-201ENST00000398372 CAMKK2Q96RR4 588 aa9.28□□□□□ -0.92
SMARCE1P6-201ENST00000398372 CCDC9Q9Y3X0 531 aaKnown RBP9.28□□□□□ -0.92
SMARCE1P6-201ENST00000398372 PLCH1Q4KWH8 1693 aa9.28□□□□□ -0.92
SMARCE1P6-201ENST00000398372 RGPD1P0DJD0 1748 aa9.28□□□□□ -0.92
SMARCE1P6-201ENST00000398372 USP32Q8NFA0 1604 aa9.27□□□□□ -0.92
SMARCE1P6-201ENST00000398372 NUTM2FA1L443 756 aa9.27□□□□□ -0.93
SMARCE1P6-201ENST00000398372 FAM98CQ17RN3 349 aaKnown RBP9.27□□□□□ -0.93
SMARCE1P6-201ENST00000398372 ACIN1Q9UKV3 1341 aaKnown RBP9.27□□□□□ -0.93
SMARCE1P6-201ENST00000398372 FAM83GA6ND36 823 aa9.26□□□□□ -0.93
SMARCE1P6-201ENST00000398372 VGFO15240 615 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1P6-201ENST00000398372 PPLO60437 1756 aa9.26□□□□□ -0.93
SMARCE1P6-201ENST00000398372 SPATA31A3Q5VYP0 1347 aa9.26□□□□□ -0.93
SMARCE1P6-201ENST00000398372 RPGRIP1LQ68CZ1 1315 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms