RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 RPGRIP1LQ68CZ1 1315 aa20.54■□□□□ 0.88
SEC13-205ENST00000397101 ZRANB1Q9UGI0 708 aa20.53■□□□□ 0.88
SEC13-205ENST00000397101 MYOM2P54296 1465 aa20.53■□□□□ 0.88
SEC13-205ENST00000397101 NPHP3Q7Z494 1330 aa20.53■□□□□ 0.88
SEC13-205ENST00000397101 ITGAEP38570 1179 aa20.52■□□□□ 0.88
SEC13-205ENST00000397101 KIF1BO60333 1816 aa20.52■□□□□ 0.88
SEC13-205ENST00000397101 BCL9LQ86UU0 1499 aa20.5■□□□□ 0.87
SEC13-205ENST00000397101 CDC42BPGQ6DT37 1551 aa20.47■□□□□ 0.87
SEC13-205ENST00000397101 LRPPRCP42704 1394 aaKnown RBP20.46■□□□□ 0.87
SEC13-205ENST00000397101 PXDNQ92626 1479 aa20.46■□□□□ 0.87
SEC13-205ENST00000397101 GJD4Q96KN9 370 aaPredicted RBP20.46■□□□□ 0.87
SEC13-205ENST00000397101 NAIPQ13075 1403 aa20.44■□□□□ 0.86
SEC13-205ENST00000397101 ESCO1Q5FWF5 840 aa20.44■□□□□ 0.86
SEC13-205ENST00000397101 TECPR2O15040 1411 aa20.42■□□□□ 0.86
SEC13-205ENST00000397101 MARF1Q9Y4F3 1742 aaKnown RBP20.41■□□□□ 0.86
SEC13-205ENST00000397101 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.41■□□□□ 0.86
SEC13-205ENST00000397101 FOXO3O43524 673 aa20.4■□□□□ 0.86
SEC13-205ENST00000397101 PPLO60437 1756 aa20.39■□□□□ 0.86
SEC13-205ENST00000397101 SLIT2O94813 1529 aa20.39■□□□□ 0.85
SEC13-205ENST00000397101 BLMP54132 1417 aaPredicted RBP20.39■□□□□ 0.85
SEC13-205ENST00000397101 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
SEC13-205ENST00000397101 UNC5CLQ8IV45 518 aa20.39■□□□□ 0.85
SEC13-205ENST00000397101 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
SEC13-205ENST00000397101 ABCC11Q96J66 1382 aa20.36■□□□□ 0.85
SEC13-205ENST00000397101 SPATA31A3Q5VYP0 1347 aa20.36■□□□□ 0.85
SEC13-205ENST00000397101 RALGAPBQ86X10 1494 aa20.36■□□□□ 0.85
SEC13-205ENST00000397101 GLI3P10071 1580 aa20.34■□□□□ 0.85
SEC13-205ENST00000397101 SLC4A1APQ9BWU0 796 aaKnown RBP20.34■□□□□ 0.85
SEC13-205ENST00000397101 CCDC144AA2RUR9 1427 aa20.34■□□□□ 0.85
SEC13-205ENST00000397101 XPCQ01831 940 aaPredicted RBP20.33■□□□□ 0.85
SEC13-205ENST00000397101 ANKRD30BQ9BXX2 1392 aa20.32■□□□□ 0.84
SEC13-205ENST00000397101 ADGRF5Q8IZF2 1346 aa20.31■□□□□ 0.84
SEC13-205ENST00000397101 ONECUT3O60422 494 aaPredicted RBP20.31■□□□□ 0.84
SEC13-205ENST00000397101 SIRT1Q96EB6 747 aa20.31■□□□□ 0.84
SEC13-205ENST00000397101 KIF1AQ12756 1690 aa20.31■□□□□ 0.84
SEC13-205ENST00000397101 WAPLQ7Z5K2 1190 aa20.3■□□□□ 0.84
SEC13-205ENST00000397101 USP32Q8NFA0 1604 aa20.3■□□□□ 0.84
SEC13-205ENST00000397101 KNDC1Q76NI1 1749 aa20.3■□□□□ 0.84
SEC13-205ENST00000397101 VPS72Q15906 364 aa20.29■□□□□ 0.84
SEC13-205ENST00000397101 SF3B2Q13435 895 aaKnown RBP20.28■□□□□ 0.84
SEC13-205ENST00000397101 SPATA31E1Q6ZUB1 1445 aa20.27■□□□□ 0.84
SEC13-205ENST00000397101 FMN2Q9NZ56 1722 aa20.27■□□□□ 0.84
SEC13-205ENST00000397101 KRT28Q7Z3Y7 464 aa20.27■□□□□ 0.84
SEC13-205ENST00000397101 SEPT12Q8IYM1 358 aa20.27■□□□□ 0.84
SEC13-205ENST00000397101 PLEKHH1Q9ULM0 1364 aa20.26■□□□□ 0.83
SEC13-205ENST00000397101 NUTM2FA1L443 756 aa20.26■□□□□ 0.83
SEC13-205ENST00000397101 PCGF6Q9BYE7 350 aa20.26■□□□□ 0.83
SEC13-205ENST00000397101 STK26Q9P289 416 aa20.26■□□□□ 0.83
SEC13-205ENST00000397101 PIK3C2GO75747 1445 aa20.26■□□□□ 0.83
SEC13-205ENST00000397101 TNS3Q68CZ2 1445 aa20.26■□□□□ 0.83
SEC13-205ENST00000397101 SBNO1A3KN83 1393 aa20.25■□□□□ 0.83
SEC13-205ENST00000397101 PSME1Q06323 249 aa20.25■□□□□ 0.83
SEC13-205ENST00000397101 DEFB132Q7Z7B7 95 aa20.25■□□□□ 0.83
SEC13-205ENST00000397101 LRP5O75197 1615 aa20.24■□□□□ 0.83
SEC13-205ENST00000397101 YTHDC2Q9H6S0 1430 aaKnown RBP20.24■□□□□ 0.83
SEC13-205ENST00000397101 NWD2Q9ULI1 1742 aa20.24■□□□□ 0.83
SEC13-205ENST00000397101 BRWD3Q6RI45 1802 aa20.23■□□□□ 0.83
SEC13-205ENST00000397101 TMEM132EQ6IEE7 984 aa20.22■□□□□ 0.83
SEC13-205ENST00000397101 KRT27Q7Z3Y8 459 aa20.22■□□□□ 0.83
SEC13-205ENST00000397101 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
SEC13-205ENST00000397101 IFT172Q9UG01 1749 aa20.22■□□□□ 0.83
SEC13-205ENST00000397101 ARHGEF10O15013 1369 aa20.21■□□□□ 0.83
SEC13-205ENST00000397101 NRXN1Q9ULB1 1477 aa20.2■□□□□ 0.82
SEC13-205ENST00000397101 HAP1P54257 671 aaPredicted RBP20.2■□□□□ 0.82
SEC13-205ENST00000397101 RGL3Q3MIN7 710 aa20.2■□□□□ 0.82
SEC13-205ENST00000397101 C14orf93Q9H972 538 aaKnown RBP20.19■□□□□ 0.82
SEC13-205ENST00000397101 BAG6P46379 1132 aa20.17■□□□□ 0.82
SEC13-205ENST00000397101 PLCH1Q4KWH8 1693 aa20.16■□□□□ 0.82
SEC13-205ENST00000397101 CABLES1Q8TDN4 633 aa20.16■□□□□ 0.82
SEC13-205ENST00000397101 CCDC9Q9Y3X0 531 aaKnown RBP20.15■□□□□ 0.82
SEC13-205ENST00000397101 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
SEC13-205ENST00000397101 ANKARQ7Z5J8 1434 aa20.15■□□□□ 0.82
SEC13-205ENST00000397101 FAM83GA6ND36 823 aa20.14■□□□□ 0.81
SEC13-205ENST00000397101 ABCA3Q99758 1704 aa20.13■□□□□ 0.81
SEC13-205ENST00000397101 MPHOSPH9Q99550 1183 aa20.13■□□□□ 0.81
SEC13-205ENST00000397101 HRCP23327 699 aa20.12■□□□□ 0.81
SEC13-205ENST00000397101 DLC1Q96QB1 1528 aa20.11■□□□□ 0.81
SEC13-205ENST00000397101 RGPD8O14715 1765 aaPredicted RBP20.11■□□□□ 0.81
SEC13-205ENST00000397101 DISP2A7MBM2 1401 aa20.1■□□□□ 0.81
SEC13-205ENST00000397101 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
SEC13-205ENST00000397101 NRAPQ86VF7 1730 aa20.1■□□□□ 0.81
SEC13-205ENST00000397101 LMOD2Q6P5Q4 547 aa20.09■□□□□ 0.81
SEC13-205ENST00000397101 PRAM1Q96QH2 718 aa20.09■□□□□ 0.81
SEC13-205ENST00000397101 FAM98CQ17RN3 349 aaKnown RBP20.08■□□□□ 0.81
SEC13-205ENST00000397101 BTG4Q9NY30 223 aa20.08■□□□□ 0.81
SEC13-205ENST00000397101 ADGRB2O60241 1585 aa20.08■□□□□ 0.8
SEC13-205ENST00000397101 CFAP70Q5T0N1 1121 aa20.07■□□□□ 0.8
SEC13-205ENST00000397101 A0A0G2JS52 829 aa20.06■□□□□ 0.8
SEC13-205ENST00000397101 PSDA5PKW4 1024 aaPredicted RBP20.06■□□□□ 0.8
SEC13-205ENST00000397101 MYT1Q01538 1121 aa20.06■□□□□ 0.8
SEC13-205ENST00000397101 EIF3AQ14152 1382 aaKnown RBP20.06■□□□□ 0.8
SEC13-205ENST00000397101 COL14A1Q05707 1796 aaKnown RBP20.06■□□□□ 0.8
SEC13-205ENST00000397101 SPATA31A5Q5VU36 1347 aa20.05■□□□□ 0.8
SEC13-205ENST00000397101 SPATA31A7Q8IWB4 1347 aa20.05■□□□□ 0.8
SEC13-205ENST00000397101 TRPM3Q9HCF6 1732 aaPredicted RBP20.05■□□□□ 0.8
SEC13-205ENST00000397101 PMFBP1Q8TBY8 1022 aa20.05■□□□□ 0.8
SEC13-205ENST00000397101 GPRASP1Q5JY77 1395 aa20.05■□□□□ 0.8
SEC13-205ENST00000397101 RGPD1P0DJD0 1748 aa20.05■□□□□ 0.8
SEC13-205ENST00000397101 EN1Q05925 392 aaPredicted RBP20.04■□□□□ 0.8
SEC13-205ENST00000397101 ALS2Q96Q42 1657 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms