RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 POGKQ9P215 609 aa17.99■□□□□ 0.47
NUP98-204ENST00000397004 KIF3BO15066 747 aa17.99■□□□□ 0.47
NUP98-204ENST00000397004 ADGRL1O94910 1474 aa17.99■□□□□ 0.47
NUP98-204ENST00000397004 PRKCSHP14314 528 aaPredicted RBP17.98■□□□□ 0.47
NUP98-204ENST00000397004 ANTXR1Q9H6X2 564 aa17.98■□□□□ 0.47
NUP98-204ENST00000397004 DAXXQ9UER7 740 aaPredicted RBP17.98■□□□□ 0.47
NUP98-204ENST00000397004 MYOM2P54296 1465 aa17.98■□□□□ 0.47
NUP98-204ENST00000397004 NRXN1Q9ULB1 1477 aa17.97■□□□□ 0.47
NUP98-204ENST00000397004 CGNL1Q0VF96 1302 aa17.97■□□□□ 0.47
NUP98-204ENST00000397004 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
NUP98-204ENST00000397004 MYO3AQ8NEV4 1616 aa17.96■□□□□ 0.47
NUP98-204ENST00000397004 NSD3Q9BZ95 1437 aa17.96■□□□□ 0.47
NUP98-204ENST00000397004 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
NUP98-204ENST00000397004 GLI2P10070 1586 aa17.95■□□□□ 0.46
NUP98-204ENST00000397004 NEURL4Q96JN8 1562 aa17.95■□□□□ 0.46
NUP98-204ENST00000397004 SLKQ9H2G2 1235 aaPredicted RBP17.94■□□□□ 0.46
NUP98-204ENST00000397004 CD109Q6YHK3 1445 aa17.93■□□□□ 0.46
NUP98-204ENST00000397004 PPRC1Q5VV67 1664 aaKnown RBP17.93■□□□□ 0.46
NUP98-204ENST00000397004 NPM1P06748 294 aaKnown RBP eCLIP17.93■□□□□ 0.46
NUP98-204ENST00000397004 TRAK1Q9UPV9 953 aa17.92■□□□□ 0.46
NUP98-204ENST00000397004 NOS1P29475 1434 aa17.92■□□□□ 0.46
NUP98-204ENST00000397004 TMEM132EQ6IEE7 984 aa17.92■□□□□ 0.46
NUP98-204ENST00000397004 PDZRN3Q9UPQ7 1066 aa17.92■□□□□ 0.46
NUP98-204ENST00000397004 ZC3H13Q5T200 1668 aaKnown RBP17.91■□□□□ 0.46
NUP98-204ENST00000397004 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
NUP98-204ENST00000397004 MTHFSP49914 203 aa17.91■□□□□ 0.46
NUP98-204ENST00000397004 ADGRB1O14514 1584 aa17.9■□□□□ 0.46
NUP98-204ENST00000397004 KIF1BO60333 1816 aa17.9■□□□□ 0.46
NUP98-204ENST00000397004 EFCAB6Q5THR3 1501 aa17.9■□□□□ 0.46
NUP98-204ENST00000397004 RUNDC1Q96C34 613 aa17.9■□□□□ 0.46
NUP98-204ENST00000397004 TBC1D2Q9BYX2 928 aa17.9■□□□□ 0.46
NUP98-204ENST00000397004 MAPK8IP3Q9UPT6 1336 aa17.9■□□□□ 0.46
NUP98-204ENST00000397004 ZNF518AQ6AHZ1 1483 aa17.9■□□□□ 0.46
NUP98-204ENST00000397004 MORC1Q86VD1 984 aa17.89■□□□□ 0.45
NUP98-204ENST00000397004 TBC1D32Q96NH3 1257 aa17.89■□□□□ 0.45
NUP98-204ENST00000397004 POGZQ7Z3K3 1410 aa17.89■□□□□ 0.45
NUP98-204ENST00000397004 CANXP27824 592 aaKnown RBP17.89■□□□□ 0.45
NUP98-204ENST00000397004 NEO1Q92859 1461 aa17.88■□□□□ 0.45
NUP98-204ENST00000397004 RICTORQ6R327 1708 aa17.88■□□□□ 0.45
NUP98-204ENST00000397004 CFAP65Q6ZU64 1925 aaKnown RBP17.87■□□□□ 0.45
NUP98-204ENST00000397004 QRICH2Q9H0J4 1663 aa17.87■□□□□ 0.45
NUP98-204ENST00000397004 FRMPD1Q5SYB0 1578 aa17.87■□□□□ 0.45
NUP98-204ENST00000397004 NINLQ9Y2I6 1382 aa17.87■□□□□ 0.45
NUP98-204ENST00000397004 NGEFQ8N5V2 710 aa17.87■□□□□ 0.45
NUP98-204ENST00000397004 ADGRB3O60242 1522 aa17.87■□□□□ 0.45
NUP98-204ENST00000397004 HECW2Q9P2P5 1572 aa17.86■□□□□ 0.45
NUP98-204ENST00000397004 DIP2BQ9P265 1576 aa17.86■□□□□ 0.45
NUP98-204ENST00000397004 KANK1Q14678 1352 aa17.86■□□□□ 0.45
NUP98-204ENST00000397004 MLH3Q9UHC1 1453 aa17.86■□□□□ 0.45
NUP98-204ENST00000397004 TSR2Q969E8 191 aaKnown RBP17.85■□□□□ 0.45
NUP98-204ENST00000397004 WDR63Q8IWG1 891 aa17.84■□□□□ 0.45
NUP98-204ENST00000397004 SETBP1Q9Y6X0 1596 aa17.84■□□□□ 0.45
NUP98-204ENST00000397004 C14orf93Q9H972 538 aaKnown RBP17.84■□□□□ 0.45
NUP98-204ENST00000397004 SPRYD3Q8NCJ5 442 aa17.83■□□□□ 0.45
NUP98-204ENST00000397004 PPLO60437 1756 aa17.82■□□□□ 0.44
NUP98-204ENST00000397004 NUTM2DQ5VT03 806 aaPredicted RBP17.82■□□□□ 0.44
NUP98-204ENST00000397004 CYB5RLQ6IPT4 315 aa17.82■□□□□ 0.44
NUP98-204ENST00000397004 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
NUP98-204ENST00000397004 NPATQ14207 1427 aa17.81■□□□□ 0.44
NUP98-204ENST00000397004 TULP4Q9NRJ4 1543 aa17.81■□□□□ 0.44
NUP98-204ENST00000397004 CHGAP10645 457 aaKnown RBP17.81■□□□□ 0.44
NUP98-204ENST00000397004 PMFBP1Q8TBY8 1022 aa17.81■□□□□ 0.44
NUP98-204ENST00000397004 MVPQ14764 893 aaKnown RBP17.8■□□□□ 0.44
NUP98-204ENST00000397004 RRAGDQ9NQL2 400 aaPredicted RBP17.8■□□□□ 0.44
NUP98-204ENST00000397004 ADGRB2O60241 1585 aa17.8■□□□□ 0.44
NUP98-204ENST00000397004 USP32Q8NFA0 1604 aa17.8■□□□□ 0.44
NUP98-204ENST00000397004 PLEKHF1Q96S99 279 aa17.79■□□□□ 0.44
NUP98-204ENST00000397004 LMTK2Q8IWU2 1503 aa17.79■□□□□ 0.44
NUP98-204ENST00000397004 TRIM35Q9UPQ4 493 aa17.79■□□□□ 0.44
NUP98-204ENST00000397004 TRIM27P14373 513 aa17.78■□□□□ 0.44
NUP98-204ENST00000397004 DIP2CQ9Y2E4 1556 aa17.77■□□□□ 0.44
NUP98-204ENST00000397004 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
NUP98-204ENST00000397004 U2AF1L5P0DN76 240 aaPredicted RBP17.77■□□□□ 0.43
NUP98-204ENST00000397004 U2AF1Q01081 240 aaKnown RBP eCLIP17.77■□□□□ 0.431e-7■■□□□ 11.9
NUP98-204ENST00000397004 KIF13AQ9H1H9 1805 aa17.76■□□□□ 0.43
NUP98-204ENST00000397004 CABP2Q9NPB3 220 aa17.76■□□□□ 0.43
NUP98-204ENST00000397004 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
NUP98-204ENST00000397004 EXOSC9Q06265 439 aaKnown RBP17.76■□□□□ 0.43
NUP98-204ENST00000397004 SSH1Q8WYL5 1049 aa17.76■□□□□ 0.43
NUP98-204ENST00000397004 BECN1Q14457 450 aa17.76■□□□□ 0.43
NUP98-204ENST00000397004 ZMYM3Q14202 1370 aa17.75■□□□□ 0.43
NUP98-204ENST00000397004 FAM43AQ8N2R8 423 aa17.75■□□□□ 0.43
NUP98-204ENST00000397004 SIGLEC1Q9BZZ2 1709 aa17.75■□□□□ 0.43
NUP98-204ENST00000397004 ZNF692Q9BU19 519 aaPredicted RBP17.74■□□□□ 0.43
NUP98-204ENST00000397004 PANK2Q9BZ23 570 aa17.74■□□□□ 0.43
NUP98-204ENST00000397004 RWDD1Q9H446 243 aaPredicted RBP17.74■□□□□ 0.43
NUP98-204ENST00000397004 DZIP1LQ8IYY4 767 aaKnown RBP17.74■□□□□ 0.43
NUP98-204ENST00000397004 COL3A1P02461 1466 aaPredicted RBP17.74■□□□□ 0.43
NUP98-204ENST00000397004 XRCC6P12956 609 aaKnown RBP eCLIP17.74■□□□□ 0.43
NUP98-204ENST00000397004 ARHGEF28Q8N1W1 1705 aaKnown RBP17.74■□□□□ 0.43
NUP98-204ENST00000397004 ARXQ96QS3 562 aa17.73■□□□□ 0.43
NUP98-204ENST00000397004 SAFB2Q14151 953 aaKnown RBP eCLIP17.73■□□□□ 0.43
NUP98-204ENST00000397004 ZKSCAN2Q63HK3 967 aa17.72■□□□□ 0.43
NUP98-204ENST00000397004 ANKRD36BQ8N2N9 1353 aa17.72■□□□□ 0.43
NUP98-204ENST00000397004 MFAP1P55081 439 aaKnown RBP17.72■□□□□ 0.43
NUP98-204ENST00000397004 FSD2A1L4K1 749 aa17.72■□□□□ 0.43
NUP98-204ENST00000397004 AAMPQ13685 434 aa17.71■□□□□ 0.43
NUP98-204ENST00000397004 CAMSAP1Q5T5Y3 1602 aa17.71■□□□□ 0.43
NUP98-204ENST00000397004 C22orf23Q9BZE7 217 aa17.71■□□□□ 0.43
NUP98-204ENST00000397004 A0A1W2PP64 1363 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms