RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 TERF2IPQ9NYB0 399 aa21.34■■□□□ 1.01
SNX6-202ENST00000396526 KIF13AQ9H1H9 1805 aa21.34■■□□□ 1.01
SNX6-202ENST00000396526 RNF123Q5XPI4 1314 aa21.34■■□□□ 1.01
SNX6-202ENST00000396526 CABP2Q9NPB3 220 aa21.34■■□□□ 1.01
SNX6-202ENST00000396526 RIMS2Q9UQ26 1411 aa21.34■■□□□ 1.01
SNX6-202ENST00000396526 SPATA31D1Q6ZQQ2 1576 aa21.33■■□□□ 1.01
SNX6-202ENST00000396526 ANKRD36BQ8N2N9 1353 aa21.33■■□□□ 1.01
SNX6-202ENST00000396526 MINK1Q8N4C8 1332 aaPredicted RBP21.32■■□□□ 1
SNX6-202ENST00000396526 NSD2O96028 1365 aa21.32■■□□□ 1
SNX6-202ENST00000396526 A2ML1A8K2U0 1454 aa21.31■■□□□ 1
SNX6-202ENST00000396526 TSHZ2Q9NRE2 1034 aa21.31■■□□□ 1
SNX6-202ENST00000396526 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
SNX6-202ENST00000396526 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
SNX6-202ENST00000396526 TNRQ92752 1358 aa21.28■■□□□ 1
SNX6-202ENST00000396526 ARHGEF28Q8N1W1 1705 aaKnown RBP21.28■■□□□ 1
SNX6-202ENST00000396526 MYO5BQ9ULV0 1848 aa21.28■■□□□ 1
SNX6-202ENST00000396526 GOLGA2Q08379 1002 aa21.28■■□□□ 1
SNX6-202ENST00000396526 TNNT2P45379 298 aaPredicted RBP21.27■■□□□ 1
SNX6-202ENST00000396526 CCDC136Q96JN2 1154 aa21.27■■□□□ 1
SNX6-202ENST00000396526 ALKQ9UM73 1620 aa21.27■■□□□ 1
SNX6-202ENST00000396526 RRP1P56182 461 aaKnown RBP21.27■□□□□ 0.99
SNX6-202ENST00000396526 CDCA7LQ96GN5 454 aa21.26■□□□□ 0.99
SNX6-202ENST00000396526 B4GALNT3Q6L9W6 998 aa21.26■□□□□ 0.99
SNX6-202ENST00000396526 TULP4Q9NRJ4 1543 aa21.25■□□□□ 0.99
SNX6-202ENST00000396526 CDK19Q9BWU1 502 aa21.24■□□□□ 0.99
SNX6-202ENST00000396526 PTPRMP28827 1452 aa21.23■□□□□ 0.99
SNX6-202ENST00000396526 ABCC11Q96J66 1382 aa21.22■□□□□ 0.99
SNX6-202ENST00000396526 CCDC146Q8IYE0 955 aa21.22■□□□□ 0.99
SNX6-202ENST00000396526 APAF1O14727 1248 aa21.22■□□□□ 0.99
SNX6-202ENST00000396526 TRHP20396 242 aaPredicted RBP21.21■□□□□ 0.99
SNX6-202ENST00000396526 MTHFSP49914 203 aa21.21■□□□□ 0.99
SNX6-202ENST00000396526 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.2■□□□□ 0.98
SNX6-202ENST00000396526 DLC1Q96QB1 1528 aa21.18■□□□□ 0.98
SNX6-202ENST00000396526 A0A1W2PP64 1363 aa21.18■□□□□ 0.98
SNX6-202ENST00000396526 USP32Q8NFA0 1604 aa21.18■□□□□ 0.98
SNX6-202ENST00000396526 EID1Q9Y6B2 187 aa21.17■□□□□ 0.98
SNX6-202ENST00000396526 SIRT1Q96EB6 747 aa21.17■□□□□ 0.98
SNX6-202ENST00000396526 WAPLQ7Z5K2 1190 aa21.16■□□□□ 0.98
SNX6-202ENST00000396526 RUNDC1Q96C34 613 aa21.16■□□□□ 0.98
SNX6-202ENST00000396526 E9PSI1 815 aa21.16■□□□□ 0.98
SNX6-202ENST00000396526 CABP1Q9NZU7 370 aa21.16■□□□□ 0.98
SNX6-202ENST00000396526 TMEM2Q9UHN6 1383 aa21.15■□□□□ 0.98
SNX6-202ENST00000396526 PLEKHH1Q9ULM0 1364 aa21.15■□□□□ 0.98
SNX6-202ENST00000396526 ZNF521Q96K83 1311 aa21.14■□□□□ 0.97
SNX6-202ENST00000396526 SLFN5Q08AF3 891 aa21.13■□□□□ 0.97
SNX6-202ENST00000396526 GGNBP2Q9H3C7 697 aa21.13■□□□□ 0.97
SNX6-202ENST00000396526 DUSP27Q5VZP5 1158 aa21.13■□□□□ 0.97
SNX6-202ENST00000396526 TXNDC2Q86VQ3 553 aa21.12■□□□□ 0.97
SNX6-202ENST00000396526 NLRP1Q9C000 1473 aa21.12■□□□□ 0.97
SNX6-202ENST00000396526 WASLO00401 505 aaPredicted RBP21.11■□□□□ 0.97
SNX6-202ENST00000396526 U2AF1L5P0DN76 240 aaPredicted RBP21.11■□□□□ 0.97
SNX6-202ENST00000396526 U2AF1Q01081 240 aaKnown RBP eCLIP21.11■□□□□ 0.97
SNX6-202ENST00000396526 FYB1O15117 783 aa21.1■□□□□ 0.97
SNX6-202ENST00000396526 PNNQ9H307 717 aaKnown RBP21.1■□□□□ 0.97
SNX6-202ENST00000396526 FAM135BQ49AJ0 1406 aa21.09■□□□□ 0.97
SNX6-202ENST00000396526 METP08581 1390 aa21.08■□□□□ 0.97
SNX6-202ENST00000396526 EXOC6Q8TAG9 804 aa21.08■□□□□ 0.96
SNX6-202ENST00000396526 RBM19Q9Y4C8 960 aaKnown RBP21.08■□□□□ 0.96
SNX6-202ENST00000396526 THEMISQ8N1K5 641 aaPredicted RBP21.07■□□□□ 0.96
SNX6-202ENST00000396526 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
SNX6-202ENST00000396526 MED14O60244 1454 aa21.07■□□□□ 0.96
SNX6-202ENST00000396526 CEBPAP49715 358 aaPredicted RBP21.06■□□□□ 0.96
SNX6-202ENST00000396526 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
SNX6-202ENST00000396526 TCP11L2Q8N4U5 519 aa21.06■□□□□ 0.96
SNX6-202ENST00000396526 CCDC61Q9Y6R9 512 aa21.06■□□□□ 0.96
SNX6-202ENST00000396526 NEUROD2Q15784 382 aa21.06■□□□□ 0.96
SNX6-202ENST00000396526 U2SURPO15042 1029 aaKnown RBP21.05■□□□□ 0.96
SNX6-202ENST00000396526 NEFMP07197 916 aa21.05■□□□□ 0.96
SNX6-202ENST00000396526 WWC1Q8IX03 1113 aa21.05■□□□□ 0.96
SNX6-202ENST00000396526 ATP7BP35670 1465 aa21.05■□□□□ 0.96
SNX6-202ENST00000396526 TRMT2AQ8IZ69 625 aaKnown RBP21.04■□□□□ 0.96
SNX6-202ENST00000396526 NUDT16Q96DE0 195 aaKnown RBP21.04■□□□□ 0.96
SNX6-202ENST00000396526 PLEKHG1Q9ULL1 1385 aa21.04■□□□□ 0.96
SNX6-202ENST00000396526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.04■□□□□ 0.96
SNX6-202ENST00000396526 ZNF692Q9BU19 519 aaPredicted RBP21.03■□□□□ 0.96
SNX6-202ENST00000396526 MAPK8IP3Q9UPT6 1336 aa21.03■□□□□ 0.96
SNX6-202ENST00000396526 WDR63Q8IWG1 891 aa21.03■□□□□ 0.96
SNX6-202ENST00000396526 TECPR2O15040 1411 aa21.03■□□□□ 0.96
SNX6-202ENST00000396526 NKTRP30414 1462 aaKnown RBP21.03■□□□□ 0.96
SNX6-202ENST00000396526 PLIN1O60240 522 aa21.02■□□□□ 0.96
SNX6-202ENST00000396526 DIAPH1O60610 1272 aaKnown RBP21.02■□□□□ 0.96
SNX6-202ENST00000396526 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
SNX6-202ENST00000396526 PPIP5K1Q6PFW1 1433 aa20.99■□□□□ 0.95
SNX6-202ENST00000396526 LTKP29376 864 aa20.99■□□□□ 0.95
SNX6-202ENST00000396526 CD163L1Q9NR16 1453 aa20.99■□□□□ 0.95
SNX6-202ENST00000396526 MYH16Q9H6N6 1097 aa20.99■□□□□ 0.95
SNX6-202ENST00000396526 RRP7AQ9Y3A4 280 aaKnown RBP20.99■□□□□ 0.95
SNX6-202ENST00000396526 UBR1Q8IWV7 1749 aa20.98■□□□□ 0.95
SNX6-202ENST00000396526 CRBNQ96SW2 442 aa20.98■□□□□ 0.95
SNX6-202ENST00000396526 TBX22Q9Y458 520 aa20.98■□□□□ 0.95
SNX6-202ENST00000396526 EDC4Q6P2E9 1401 aaKnown RBP20.98■□□□□ 0.95
SNX6-202ENST00000396526 COG3Q96JB2 828 aa20.97■□□□□ 0.95
SNX6-202ENST00000396526 SETD1AO15047 1707 aaKnown RBP20.97■□□□□ 0.95
SNX6-202ENST00000396526 PPM1GO15355 546 aaPredicted RBP20.97■□□□□ 0.95
SNX6-202ENST00000396526 CANXP27824 592 aaKnown RBP20.97■□□□□ 0.95
SNX6-202ENST00000396526 SLC26A8Q96RN1 970 aa20.97■□□□□ 0.95
SNX6-202ENST00000396526 NRXN3Q9Y4C0 1643 aa20.97■□□□□ 0.95
SNX6-202ENST00000396526 ADAMTS13Q76LX8 1427 aa20.95■□□□□ 0.94
SNX6-202ENST00000396526 SPINK5Q9NQ38 1064 aaPredicted RBP20.94■□□□□ 0.94
SNX6-202ENST00000396526 CPS1P31327 1500 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms