RNA–Protein interactions for RNA: ENST00000396076.5

LDHB-203, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LDHB, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-203ENST00000396076 MIER1Q8N108 512 aa32.38■■■□□ 2.77
LDHB-203ENST00000396076 PUS7Q96PZ0 661 aaKnown RBP32.36■■■□□ 2.77
LDHB-203ENST00000396076 TULP4Q9NRJ4 1543 aa32.34■■■□□ 2.77
LDHB-203ENST00000396076 PTCH1Q13635 1447 aa32.31■■■□□ 2.76
LDHB-203ENST00000396076 KCNA6P17658 529 aa32.29■■■□□ 2.76
LDHB-203ENST00000396076 XRN1Q8IZH2 1706 aaKnown RBP32.28■■■□□ 2.76
LDHB-203ENST00000396076 ANP32CO43423 234 aa32.27■■■□□ 2.76
LDHB-203ENST00000396076 CABP2Q9NPB3 220 aa32.27■■■□□ 2.76
LDHB-203ENST00000396076 CDK19Q9BWU1 502 aa32.26■■■□□ 2.76
LDHB-203ENST00000396076 PANK3Q9H999 370 aa32.26■■■□□ 2.76
LDHB-203ENST00000396076 SRPK2P78362 688 aaKnown RBP32.26■■■□□ 2.75
LDHB-203ENST00000396076 CHD2O14647 1828 aaKnown RBP32.22■■■□□ 2.75
LDHB-203ENST00000396076 WASLO00401 505 aaPredicted RBP32.22■■■□□ 2.75
LDHB-203ENST00000396076 PER1O15534 1290 aaPredicted RBP32.21■■■□□ 2.75
LDHB-203ENST00000396076 MYOM1P52179 1685 aa32.19■■■□□ 2.74
LDHB-203ENST00000396076 ATAD2Q6PL18 1390 aa32.19■■■□□ 2.74
LDHB-203ENST00000396076 TMC1Q8TDI8 760 aa32.18■■■□□ 2.74
LDHB-203ENST00000396076 SLC12A5Q9H2X9 1139 aa32.17■■■□□ 2.74
LDHB-203ENST00000396076 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.17■■■□□ 2.74
LDHB-203ENST00000396076 STRCQ7RTU9 1775 aa32.14■■■□□ 2.74
LDHB-203ENST00000396076 ADGRB2O60241 1585 aa32.14■■■□□ 2.73
LDHB-203ENST00000396076 NINLQ9Y2I6 1382 aa32.13■■■□□ 2.73
LDHB-203ENST00000396076 NWD1Q149M9 1564 aa32.12■■■□□ 2.73
LDHB-203ENST00000396076 PRKRIP1Q9H875 184 aaPredicted RBP32.11■■■□□ 2.73
LDHB-203ENST00000396076 KNSTRNQ9Y448 316 aa32.09■■■□□ 2.73
LDHB-203ENST00000396076 NUDT16Q96DE0 195 aaKnown RBP32.07■■■□□ 2.72
LDHB-203ENST00000396076 CARD14Q9BXL6 1004 aa32.07■■■□□ 2.72
LDHB-203ENST00000396076 CABP1Q9NZU7 370 aa32.05■■■□□ 2.72
LDHB-203ENST00000396076 ANKRD36BQ8N2N9 1353 aa32.04■■■□□ 2.72
LDHB-203ENST00000396076 NKTRP30414 1462 aaKnown RBP32.04■■■□□ 2.72
LDHB-203ENST00000396076 PROSER2Q86WR7 435 aaPredicted RBP32.03■■■□□ 2.72
LDHB-203ENST00000396076 RBM33Q96EV2 1170 aaKnown RBP32.03■■■□□ 2.72
LDHB-203ENST00000396076 CCDC61Q9Y6R9 512 aa32.03■■■□□ 2.72
LDHB-203ENST00000396076 PRR36Q9H6K5 1346 aa32.03■■■□□ 2.72
LDHB-203ENST00000396076 CCER2I3L3R5 266 aa32.02■■■□□ 2.72
LDHB-203ENST00000396076 CNGB1Q14028 1251 aaPredicted RBP32.02■■■□□ 2.72
LDHB-203ENST00000396076 AMER1Q5JTC6 1135 aaPredicted RBP32■■■□□ 2.71
LDHB-203ENST00000396076 TERF2IPQ9NYB0 399 aa32■■■□□ 2.71
LDHB-203ENST00000396076 DMRT2Q9Y5R5 561 aa32■■■□□ 2.71
LDHB-203ENST00000396076 ATP7BP35670 1465 aa32■■■□□ 2.71
LDHB-203ENST00000396076 KTN1Q86UP2 1357 aaKnown RBP32■■■□□ 2.71
LDHB-203ENST00000396076 ADGRL3Q9HAR2 1447 aa31.99■■■□□ 2.71
LDHB-203ENST00000396076 RALBP1Q15311 655 aa31.98■■■□□ 2.71
LDHB-203ENST00000396076 PPIP5K1Q6PFW1 1433 aa31.98■■■□□ 2.71
LDHB-203ENST00000396076 CD163L1Q9NR16 1453 aa31.97■■■□□ 2.71
LDHB-203ENST00000396076 A0A1W2PP64 1363 aa31.97■■■□□ 2.71
LDHB-203ENST00000396076 CC2D1BQ5T0F9 858 aaKnown RBP31.97■■■□□ 2.71
LDHB-203ENST00000396076 NSD3Q9BZ95 1437 aa31.96■■■□□ 2.71
LDHB-203ENST00000396076 NPC1L1Q9UHC9 1359 aa31.96■■■□□ 2.71
LDHB-203ENST00000396076 HDGFL2Q7Z4V5 671 aaPredicted RBP31.96■■■□□ 2.71
LDHB-203ENST00000396076 NUTM2FA1L443 756 aa31.95■■■□□ 2.71
LDHB-203ENST00000396076 C14orf37Q86TY3 774 aa31.95■■■□□ 2.7
LDHB-203ENST00000396076 PARD3Q8TEW0 1356 aa31.93■■■□□ 2.7
LDHB-203ENST00000396076 NALCNQ8IZF0 1738 aa31.93■■■□□ 2.7
LDHB-203ENST00000396076 STRCP1A6NGW2 1772 aa31.93■■■□□ 2.7
LDHB-203ENST00000396076 CDC42BPGQ6DT37 1551 aa31.92■■■□□ 2.7
LDHB-203ENST00000396076 ANKARQ7Z5J8 1434 aa31.91■■■□□ 2.7
LDHB-203ENST00000396076 PLEKHG3A1L390 1219 aa31.9■■■□□ 2.7
LDHB-203ENST00000396076 TMEM94Q12767 1356 aa31.9■■■□□ 2.7
LDHB-203ENST00000396076 NCOA3Q9Y6Q9 1424 aa31.9■■■□□ 2.7
LDHB-203ENST00000396076 CPSF1Q10570 1443 aaKnown RBP31.89■■■□□ 2.7
LDHB-203ENST00000396076 ZNF335Q9H4Z2 1342 aaPredicted RBP31.88■■■□□ 2.69
LDHB-203ENST00000396076 USP32Q8NFA0 1604 aa31.88■■■□□ 2.69
LDHB-203ENST00000396076 C19orf44Q9H6X5 657 aa31.88■■■□□ 2.69
LDHB-203ENST00000396076 CGNL1Q0VF96 1302 aa31.87■■■□□ 2.69
LDHB-203ENST00000396076 FMN2Q9NZ56 1722 aa31.87■■■□□ 2.69
LDHB-203ENST00000396076 TOPAZ1Q8N9V7 1692 aa31.85■■■□□ 2.69
LDHB-203ENST00000396076 MYBBP1AQ9BQG0 1328 aaKnown RBP31.85■■■□□ 2.69
LDHB-203ENST00000396076 ZNF692Q9BU19 519 aaPredicted RBP31.85■■■□□ 2.69
LDHB-203ENST00000396076 ACEP12821 1306 aa31.82■■■□□ 2.68
LDHB-203ENST00000396076 CCDC184Q52MB2 194 aa31.8■■■□□ 2.68
LDHB-203ENST00000396076 NSD2O96028 1365 aa31.79■■■□□ 2.68
LDHB-203ENST00000396076 PMFBP1Q8TBY8 1022 aa31.79■■■□□ 2.68
LDHB-203ENST00000396076 EDC4Q6P2E9 1401 aaKnown RBP31.78■■■□□ 2.68
LDHB-203ENST00000396076 LRRC7Q96NW7 1537 aa31.78■■■□□ 2.68
LDHB-203ENST00000396076 ITSN1Q15811 1721 aa31.77■■■□□ 2.68
LDHB-203ENST00000396076 POLR3AO14802 1390 aaPredicted RBP31.76■■■□□ 2.68
LDHB-203ENST00000396076 FYB1O15117 783 aa31.76■■■□□ 2.68
LDHB-203ENST00000396076 MRS2Q9HD23 443 aa31.76■■■□□ 2.68
LDHB-203ENST00000396076 DCCP43146 1447 aa31.76■■■□□ 2.67
LDHB-203ENST00000396076 NLRP13Q86W25 1043 aa31.75■■■□□ 2.67
LDHB-203ENST00000396076 NGDNQ8NEJ9 315 aaKnown RBP31.75■■■□□ 2.67
LDHB-203ENST00000396076 ATF3P18847 181 aa31.75■■■□□ 2.67
LDHB-203ENST00000396076 MORC1Q86VD1 984 aa31.75■■■□□ 2.67
LDHB-203ENST00000396076 RGPD8O14715 1765 aaPredicted RBP31.74■■■□□ 2.67
LDHB-203ENST00000396076 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.74■■■□□ 2.67
LDHB-203ENST00000396076 PPP2R1AP30153 589 aa31.73■■■□□ 2.67
LDHB-203ENST00000396076 PHF8Q9UPP1 1060 aa31.73■■■□□ 2.67
LDHB-203ENST00000396076 AKAP12Q02952 1782 aa31.73■■■□□ 2.67
LDHB-203ENST00000396076 BRD4O60885 1362 aaPredicted RBP31.72■■■□□ 2.67
LDHB-203ENST00000396076 MSH6P52701 1360 aa31.72■■■□□ 2.67
LDHB-203ENST00000396076 ESCO1Q5FWF5 840 aa31.71■■■□□ 2.67
LDHB-203ENST00000396076 GGNBP2Q9H3C7 697 aa31.71■■■□□ 2.67
LDHB-203ENST00000396076 USP6P35125 1406 aa31.71■■■□□ 2.67
LDHB-203ENST00000396076 MON2Q7Z3U7 1717 aa31.71■■■□□ 2.67
LDHB-203ENST00000396076 AEBP2Q6ZN18 517 aaPredicted RBP31.7■■■□□ 2.67
LDHB-203ENST00000396076 CADPS2Q86UW7 1296 aa31.7■■■□□ 2.67
LDHB-203ENST00000396076 C1orf167Q5SNV9 1468 aa31.68■■■□□ 2.66
LDHB-203ENST00000396076 TTC21BQ7Z4L5 1316 aa31.67■■■□□ 2.66
LDHB-203ENST00000396076 SSH2Q76I76 1423 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms