RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 FOXK1P85037 733 aa16.57■□□□□ 0.24
RTN1-203ENST00000395090 YEATS2Q9ULM3 1422 aa16.57■□□□□ 0.24
RTN1-203ENST00000395090 ABCA6Q8N139 1617 aa16.57■□□□□ 0.24
RTN1-203ENST00000395090 DIP2CQ9Y2E4 1556 aa16.57■□□□□ 0.24
RTN1-203ENST00000395090 POTEFA5A3E0 1075 aa16.56■□□□□ 0.24
RTN1-203ENST00000395090 ANKRD30BQ9BXX2 1392 aa16.56■□□□□ 0.24
RTN1-203ENST00000395090 SIN3AQ96ST3 1273 aa16.56■□□□□ 0.24
RTN1-203ENST00000395090 FAM135AQ9P2D6 1515 aa16.55■□□□□ 0.24
RTN1-203ENST00000395090 C2orf72A6NCS6 295 aa16.55■□□□□ 0.24
RTN1-203ENST00000395090 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
RTN1-203ENST00000395090 DEPDC5O75140 1603 aa16.54■□□□□ 0.24
RTN1-203ENST00000395090 ATP10AO60312 1499 aa16.54■□□□□ 0.24
RTN1-203ENST00000395090 TULP1O00294 542 aaPredicted RBP16.53■□□□□ 0.24
RTN1-203ENST00000395090 KIF3CO14782 793 aa16.53■□□□□ 0.24
RTN1-203ENST00000395090 IQGAP3Q86VI3 1631 aa16.53■□□□□ 0.24
RTN1-203ENST00000395090 BCORL1Q5H9F3 1711 aa16.53■□□□□ 0.24
RTN1-203ENST00000395090 SEMA3EO15041 775 aa16.52■□□□□ 0.24
RTN1-203ENST00000395090 VWDEQ8N2E2 1590 aa16.51■□□□□ 0.23
RTN1-203ENST00000395090 REREQ9P2R6 1566 aa16.5■□□□□ 0.23
RTN1-203ENST00000395090 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
RTN1-203ENST00000395090 KANK1Q14678 1352 aa16.49■□□□□ 0.23
RTN1-203ENST00000395090 NEUROD1Q13562 356 aa16.49■□□□□ 0.23
RTN1-203ENST00000395090 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.49■□□□□ 0.23
RTN1-203ENST00000395090 PLPP6Q8IY26 295 aa16.49■□□□□ 0.23
RTN1-203ENST00000395090 MROH1Q8NDA8 1641 aa16.49■□□□□ 0.23
RTN1-203ENST00000395090 RNF17Q9BXT8 1623 aaKnown RBP16.49■□□□□ 0.23
RTN1-203ENST00000395090 TESPA1A2RU30 521 aaPredicted RBP16.48■□□□□ 0.23
RTN1-203ENST00000395090 LMOD2Q6P5Q4 547 aa16.48■□□□□ 0.23
RTN1-203ENST00000395090 EMILIN3Q9NT22 766 aa16.47■□□□□ 0.23
RTN1-203ENST00000395090 AGLP35573 1532 aa16.47■□□□□ 0.23
RTN1-203ENST00000395090 TMEM92Q6UXU6 159 aa16.46■□□□□ 0.23
RTN1-203ENST00000395090 GGT6Q6P531 493 aa16.45■□□□□ 0.22
RTN1-203ENST00000395090 LMTK2Q8IWU2 1503 aa16.45■□□□□ 0.22
RTN1-203ENST00000395090 ARHGEF40Q8TER5 1519 aa16.45■□□□□ 0.22
RTN1-203ENST00000395090 RPRD2Q5VT52 1461 aaKnown RBP16.44■□□□□ 0.22
RTN1-203ENST00000395090 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
RTN1-203ENST00000395090 PLA2R1Q13018 1463 aa16.43■□□□□ 0.22
RTN1-203ENST00000395090 DPYSL4O14531 572 aa16.42■□□□□ 0.22
RTN1-203ENST00000395090 TET3O43151 1660 aa16.42■□□□□ 0.22
RTN1-203ENST00000395090 PPP1R15AO75807 674 aaPredicted RBP16.41■□□□□ 0.22
RTN1-203ENST00000395090 WASHC2CQ9Y4E1 1318 aa16.41■□□□□ 0.22
RTN1-203ENST00000395090 PTPRTO14522 1441 aa16.4■□□□□ 0.22
RTN1-203ENST00000395090 SMYD5Q6GMV2 418 aa16.4■□□□□ 0.22
RTN1-203ENST00000395090 TONSLQ96HA7 1378 aa16.39■□□□□ 0.21
RTN1-203ENST00000395090 E9PCH4 1651 aa16.39■□□□□ 0.21
RTN1-203ENST00000395090 ABCC3O15438 1527 aa16.38■□□□□ 0.21
RTN1-203ENST00000395090 EFCAB6Q5THR3 1501 aa16.37■□□□□ 0.21
RTN1-203ENST00000395090 SIGLEC1Q9BZZ2 1709 aa16.37■□□□□ 0.21
RTN1-203ENST00000395090 SPDYE16A6NNV3 312 aaPredicted RBP16.36■□□□□ 0.21
RTN1-203ENST00000395090 L3MBTL2Q969R5 705 aa16.36■□□□□ 0.21
RTN1-203ENST00000395090 ARHGAP31Q2M1Z3 1444 aa16.36■□□□□ 0.21
RTN1-203ENST00000395090 PDIA6Q15084 440 aa16.35■□□□□ 0.21
RTN1-203ENST00000395090 CCDC144AA2RUR9 1427 aa16.35■□□□□ 0.21
RTN1-203ENST00000395090 NPATQ14207 1427 aa16.34■□□□□ 0.21
RTN1-203ENST00000395090 CEP152O94986 1710 aa16.33■□□□□ 0.2
RTN1-203ENST00000395090 ZC3H13Q5T200 1668 aaKnown RBP16.33■□□□□ 0.2
RTN1-203ENST00000395090 TRPM2O94759 1503 aa16.32■□□□□ 0.2
RTN1-203ENST00000395090 MAP3K9P80192 1104 aa16.31■□□□□ 0.2
RTN1-203ENST00000395090 CAMSAP1Q5T5Y3 1602 aa16.3■□□□□ 0.2
RTN1-203ENST00000395090 UPF1Q92900 1129 aaKnown RBP eCLIP16.3■□□□□ 0.2
RTN1-203ENST00000395090 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.3■□□□□ 0.2
RTN1-203ENST00000395090 SPHKAPQ2M3C7 1700 aa16.3■□□□□ 0.2
RTN1-203ENST00000395090 NOS1P29475 1434 aa16.29■□□□□ 0.2
RTN1-203ENST00000395090 MLLT3P42568 568 aaPredicted RBP16.29■□□□□ 0.2
RTN1-203ENST00000395090 ARID4BQ4LE39 1312 aaPredicted RBP16.29■□□□□ 0.2
RTN1-203ENST00000395090 MLECQ14165 292 aa16.28■□□□□ 0.2
RTN1-203ENST00000395090 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
RTN1-203ENST00000395090 SPATA31E1Q6ZUB1 1445 aa16.27■□□□□ 0.2
RTN1-203ENST00000395090 OXER1Q8TDS5 423 aa16.27■□□□□ 0.2
RTN1-203ENST00000395090 NEURL4Q96JN8 1562 aa16.25■□□□□ 0.19
RTN1-203ENST00000395090 CLTCL1P53675 1640 aa16.24■□□□□ 0.19
RTN1-203ENST00000395090 ZC3H15Q8WU90 426 aaKnown RBP16.23■□□□□ 0.19
RTN1-203ENST00000395090 STAC3Q96MF2 364 aa16.23■□□□□ 0.19
RTN1-203ENST00000395090 SLC52A1Q9NWF4 448 aa16.23■□□□□ 0.19
RTN1-203ENST00000395090 ZMYM3Q14202 1370 aa16.23■□□□□ 0.19
RTN1-203ENST00000395090 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
RTN1-203ENST00000395090 RGL3Q3MIN7 710 aa16.23■□□□□ 0.19
RTN1-203ENST00000395090 ESF1Q9H501 851 aaKnown RBP16.23■□□□□ 0.19
RTN1-203ENST00000395090 UHRF1BP1Q6BDS2 1440 aa16.22■□□□□ 0.19
RTN1-203ENST00000395090 DCAF11Q8TEB1 546 aa16.22■□□□□ 0.19
RTN1-203ENST00000395090 CLTCQ00610 1675 aaKnown RBP16.22■□□□□ 0.19
RTN1-203ENST00000395090 FBXO31Q5XUX0 539 aaPredicted RBP16.21■□□□□ 0.19
RTN1-203ENST00000395090 CFAP65Q6ZU64 1925 aaKnown RBP16.2■□□□□ 0.18
RTN1-203ENST00000395090 SYNMO15061 1565 aa16.2■□□□□ 0.18
RTN1-203ENST00000395090 UGGT1Q9NYU2 1555 aa16.2■□□□□ 0.18
RTN1-203ENST00000395090 TBC1D12O60347 775 aa16.19■□□□□ 0.18
RTN1-203ENST00000395090 ERVK-7P63135 1459 aa16.19■□□□□ 0.18
RTN1-203ENST00000395090 IDI1Q13907 227 aa16.19■□□□□ 0.18
RTN1-203ENST00000395090 PTCD2Q8WV60 388 aaKnown RBP16.19■□□□□ 0.18
RTN1-203ENST00000395090 PIK3C2BO00750 1634 aa16.18■□□□□ 0.18
RTN1-203ENST00000395090 PREX1Q8TCU6 1659 aa16.18■□□□□ 0.18
RTN1-203ENST00000395090 SLC34A2O95436 690 aa16.18■□□□□ 0.18
RTN1-203ENST00000395090 RBM26Q5T8P6 1007 aaKnown RBP16.18■□□□□ 0.18
RTN1-203ENST00000395090 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
RTN1-203ENST00000395090 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
RTN1-203ENST00000395090 MROH2AA6NES4 1674 aa16.16■□□□□ 0.18
RTN1-203ENST00000395090 RPGRIP1LQ68CZ1 1315 aa16.15■□□□□ 0.18
RTN1-203ENST00000395090 KIF1BO60333 1816 aa16.15■□□□□ 0.18
RTN1-203ENST00000395090 ADGRB3O60242 1522 aa16.14■□□□□ 0.17
RTN1-203ENST00000395090 PRAG1Q86YV5 1406 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms