RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 FOXD4L6Q3SYB3 417 aaPredicted RBP21.14■□□□□ 0.97
SIPA1-201ENST00000394224 FOXD4L3Q6VB84 417 aaPredicted RBP21.14■□□□□ 0.97
SIPA1-201ENST00000394224 CDC42BPAQ5VT25 1732 aa21.14■□□□□ 0.97
SIPA1-201ENST00000394224 RIPK4P57078 832 aa21.13■□□□□ 0.97
SIPA1-201ENST00000394224 SCAPERQ9BY12 1400 aa21.13■□□□□ 0.97
SIPA1-201ENST00000394224 MVPQ14764 893 aaKnown RBP21.12■□□□□ 0.97
SIPA1-201ENST00000394224 EIF3AQ14152 1382 aaKnown RBP21.12■□□□□ 0.97
SIPA1-201ENST00000394224 SLC24A1O60721 1099 aa21.12■□□□□ 0.97
SIPA1-201ENST00000394224 FAM43AQ8N2R8 423 aa21.11■□□□□ 0.97
SIPA1-201ENST00000394224 MYH16Q9H6N6 1097 aa21.11■□□□□ 0.97
SIPA1-201ENST00000394224 UGGT1Q9NYU2 1555 aa21.1■□□□□ 0.97
SIPA1-201ENST00000394224 TRPM1Q7Z4N2 1603 aa21.1■□□□□ 0.97
SIPA1-201ENST00000394224 SAMD9LQ8IVG5 1584 aa21.1■□□□□ 0.97
SIPA1-201ENST00000394224 NOL8Q76FK4 1167 aaKnown RBP21.09■□□□□ 0.97
SIPA1-201ENST00000394224 ASXL1Q8IXJ9 1541 aa21.09■□□□□ 0.97
SIPA1-201ENST00000394224 L1TD1Q5T7N2 865 aaKnown RBP21.09■□□□□ 0.97
SIPA1-201ENST00000394224 TRIM44Q96DX7 344 aaPredicted RBP21.09■□□□□ 0.97
SIPA1-201ENST00000394224 NUTM2FA1L443 756 aa21.08■□□□□ 0.97
SIPA1-201ENST00000394224 ANTXR1Q9H6X2 564 aa21.08■□□□□ 0.96
SIPA1-201ENST00000394224 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
SIPA1-201ENST00000394224 CHAMP1Q96JM3 812 aa21.07■□□□□ 0.96
SIPA1-201ENST00000394224 PLEKHG5O94827 1062 aa21.07■□□□□ 0.96
SIPA1-201ENST00000394224 CFAP65Q6ZU64 1925 aaKnown RBP21.07■□□□□ 0.96
SIPA1-201ENST00000394224 MPNDQ8N594 471 aa21.06■□□□□ 0.96
SIPA1-201ENST00000394224 SCAF11Q99590 1463 aaKnown RBP21.06■□□□□ 0.96
SIPA1-201ENST00000394224 ADCY10Q96PN6 1610 aa21.06■□□□□ 0.96
SIPA1-201ENST00000394224 VSIG10Q8N0Z9 540 aa21.05■□□□□ 0.96
SIPA1-201ENST00000394224 RSPH6AQ9H0K4 717 aa21.04■□□□□ 0.96
SIPA1-201ENST00000394224 KANK1Q14678 1352 aa21.04■□□□□ 0.96
SIPA1-201ENST00000394224 CHMP5Q9NZZ3 219 aa21.04■□□□□ 0.96
SIPA1-201ENST00000394224 ATAD2Q6PL18 1390 aa21.04■□□□□ 0.96
SIPA1-201ENST00000394224 CD2BP2O95400 341 aaKnown RBP21.04■□□□□ 0.96
SIPA1-201ENST00000394224 SHANK2Q9UPX8 1470 aa21.03■□□□□ 0.96
SIPA1-201ENST00000394224 DCTN1Q14203 1278 aa21.03■□□□□ 0.96
SIPA1-201ENST00000394224 INSRP06213 1382 aa21.02■□□□□ 0.95
SIPA1-201ENST00000394224 PRDM15P57071 1507 aaPredicted RBP21.01■□□□□ 0.95
SIPA1-201ENST00000394224 ATF7IPQ6VMQ6 1270 aa21.01■□□□□ 0.95
SIPA1-201ENST00000394224 TMPOP42166 694 aaKnown RBP21.01■□□□□ 0.95
SIPA1-201ENST00000394224 STAG3Q9UJ98 1225 aa21.01■□□□□ 0.95
SIPA1-201ENST00000394224 CROCC2H7BZ55 1655 aa21■□□□□ 0.95
SIPA1-201ENST00000394224 DTNBO60941 627 aa20.99■□□□□ 0.95
SIPA1-201ENST00000394224 TNPO1Q92973 898 aaKnown RBP20.99■□□□□ 0.95
SIPA1-201ENST00000394224 E9PCH4 1651 aa20.99■□□□□ 0.95
SIPA1-201ENST00000394224 NOS1P29475 1434 aa20.99■□□□□ 0.95
SIPA1-201ENST00000394224 GAS2L3Q86XJ1 694 aa20.98■□□□□ 0.95
SIPA1-201ENST00000394224 TSPYL6Q8N831 410 aa20.98■□□□□ 0.95
SIPA1-201ENST00000394224 GRPEL1Q9HAV7 217 aa20.98■□□□□ 0.95
SIPA1-201ENST00000394224 ABCA8O94911 1581 aa20.97■□□□□ 0.95
SIPA1-201ENST00000394224 TTC37Q6PGP7 1564 aa20.97■□□□□ 0.95
SIPA1-201ENST00000394224 PIK3C2GO75747 1445 aa20.97■□□□□ 0.95
SIPA1-201ENST00000394224 SSFA2P28290 1259 aa20.97■□□□□ 0.95
SIPA1-201ENST00000394224 PRKAR2BP31323 418 aa20.97■□□□□ 0.95
SIPA1-201ENST00000394224 FAM83GA6ND36 823 aa20.96■□□□□ 0.95
SIPA1-201ENST00000394224 C16orf71Q8IYS4 520 aaPredicted RBP20.96■□□□□ 0.95
SIPA1-201ENST00000394224 DDX19BQ9UMR2 479 aa20.96■□□□□ 0.95
SIPA1-201ENST00000394224 WDR63Q8IWG1 891 aa20.95■□□□□ 0.94
SIPA1-201ENST00000394224 RAPGEF3O95398 923 aa20.94■□□□□ 0.94
SIPA1-201ENST00000394224 DDX49Q9Y6V7 483 aaKnown RBP20.94■□□□□ 0.94
SIPA1-201ENST00000394224 MLECQ14165 292 aa20.94■□□□□ 0.94
SIPA1-201ENST00000394224 NUP160Q12769 1436 aa20.94■□□□□ 0.94
SIPA1-201ENST00000394224 KRT24Q2M2I5 525 aa20.93■□□□□ 0.94
SIPA1-201ENST00000394224 RBM10P98175 930 aaKnown RBP20.93■□□□□ 0.94
SIPA1-201ENST00000394224 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
SIPA1-201ENST00000394224 SMARCA5O60264 1052 aaPredicted RBP20.92■□□□□ 0.94
SIPA1-201ENST00000394224 ZRANB1Q9UGI0 708 aa20.92■□□□□ 0.94
SIPA1-201ENST00000394224 TRIM35Q9UPQ4 493 aa20.92■□□□□ 0.94
SIPA1-201ENST00000394224 MCTP1Q6DN14 999 aa20.92■□□□□ 0.94
SIPA1-201ENST00000394224 ZNF428Q96B54 188 aa20.92■□□□□ 0.94
SIPA1-201ENST00000394224 CABP1Q9NZU7 370 aa20.92■□□□□ 0.94
SIPA1-201ENST00000394224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.92■□□□□ 0.94
SIPA1-201ENST00000394224 ERBB4Q15303 1308 aa20.92■□□□□ 0.94
SIPA1-201ENST00000394224 CHD1LQ86WJ1 897 aa20.92■□□□□ 0.94
SIPA1-201ENST00000394224 PRAM1Q96QH2 718 aa20.92■□□□□ 0.94
SIPA1-201ENST00000394224 HSP90AA2PQ14568 343 aaPredicted RBP20.91■□□□□ 0.94
SIPA1-201ENST00000394224 TSHZ3Q63HK5 1081 aa20.91■□□□□ 0.94
SIPA1-201ENST00000394224 NECTIN2Q92692 538 aa20.91■□□□□ 0.94
SIPA1-201ENST00000394224 ERVK-7P63135 1459 aa20.91■□□□□ 0.94
SIPA1-201ENST00000394224 PHACTR3Q96KR7 559 aa20.91■□□□□ 0.94
SIPA1-201ENST00000394224 DIAPH1O60610 1272 aaKnown RBP20.9■□□□□ 0.94
SIPA1-201ENST00000394224 ATP10AO60312 1499 aa20.9■□□□□ 0.94
SIPA1-201ENST00000394224 CDC42BPBQ9Y5S2 1711 aa20.89■□□□□ 0.94
SIPA1-201ENST00000394224 EVC2Q86UK5 1308 aa20.89■□□□□ 0.94
SIPA1-201ENST00000394224 PKP1Q13835 747 aa20.89■□□□□ 0.93
SIPA1-201ENST00000394224 OTUD7AQ8TE49 926 aaPredicted RBP20.89■□□□□ 0.93
SIPA1-201ENST00000394224 NCKAP5LQ9HCH0 1330 aa20.89■□□□□ 0.93
SIPA1-201ENST00000394224 RRS1Q15050 365 aaKnown RBP20.89■□□□□ 0.93
SIPA1-201ENST00000394224 SLC4A10Q6U841 1118 aa20.89■□□□□ 0.93
SIPA1-201ENST00000394224 GAS2L2Q8NHY3 880 aa20.89■□□□□ 0.93
SIPA1-201ENST00000394224 MIS18AQ9NYP9 233 aa20.89■□□□□ 0.93
SIPA1-201ENST00000394224 CAVIN1Q6NZI2 390 aaKnown RBP20.88■□□□□ 0.93
SIPA1-201ENST00000394224 RNF214Q8ND24 703 aa20.88■□□□□ 0.93
SIPA1-201ENST00000394224 UBE2Q2Q8WVN8 375 aa20.88■□□□□ 0.93
SIPA1-201ENST00000394224 ESPNB1AK53 854 aa20.88■□□□□ 0.93
SIPA1-201ENST00000394224 WAPLQ7Z5K2 1190 aa20.87■□□□□ 0.93
SIPA1-201ENST00000394224 TBC1D9Q6ZT07 1266 aa20.87■□□□□ 0.93
SIPA1-201ENST00000394224 EMILIN1Q9Y6C2 1016 aa20.87■□□□□ 0.93
SIPA1-201ENST00000394224 IPO8O15397 1037 aaKnown RBP20.86■□□□□ 0.93
SIPA1-201ENST00000394224 MRE11P49959 708 aa20.86■□□□□ 0.93
SIPA1-201ENST00000394224 POLR3AO14802 1390 aaPredicted RBP20.85■□□□□ 0.93
SIPA1-201ENST00000394224 GBP4Q96PP9 640 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms