RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 METP08581 1390 aa29.85■■■□□ 2.37
HMGA2-203ENST00000393578 NSD3Q9BZ95 1437 aa29.85■■■□□ 2.37
HMGA2-203ENST00000393578 ATAD2Q6PL18 1390 aa29.84■■■□□ 2.37
HMGA2-203ENST00000393578 ANKRD36BQ8N2N9 1353 aa29.84■■■□□ 2.37
HMGA2-203ENST00000393578 SRPK2P78362 688 aaKnown RBP29.83■■■□□ 2.37
HMGA2-203ENST00000393578 USP32Q8NFA0 1604 aa29.83■■■□□ 2.37
HMGA2-203ENST00000393578 PLEKHG1Q9ULL1 1385 aa29.82■■■□□ 2.36
HMGA2-203ENST00000393578 SLIT1O75093 1534 aa29.8■■■□□ 2.36
HMGA2-203ENST00000393578 RIMS1Q86UR5 1692 aaKnown RBP29.8■■■□□ 2.36
HMGA2-203ENST00000393578 KNDC1Q76NI1 1749 aa29.79■■■□□ 2.36
HMGA2-203ENST00000393578 ARHGAP23Q9P227 1491 aa29.79■■■□□ 2.36
HMGA2-203ENST00000393578 TECPR2O15040 1411 aa29.79■■■□□ 2.36
HMGA2-203ENST00000393578 BCANQ96GW7 911 aa29.79■■■□□ 2.36
HMGA2-203ENST00000393578 LTKP29376 864 aa29.79■■■□□ 2.36
HMGA2-203ENST00000393578 SIRT1Q96EB6 747 aa29.79■■■□□ 2.36
HMGA2-203ENST00000393578 EID1Q9Y6B2 187 aa29.78■■■□□ 2.36
HMGA2-203ENST00000393578 ADAMTS13Q76LX8 1427 aa29.78■■■□□ 2.36
HMGA2-203ENST00000393578 WAPLQ7Z5K2 1190 aa29.77■■■□□ 2.36
HMGA2-203ENST00000393578 TXNDC2Q86VQ3 553 aa29.77■■■□□ 2.36
HMGA2-203ENST00000393578 PLPPR3Q6T4P5 718 aa29.77■■■□□ 2.36
HMGA2-203ENST00000393578 SUPT16HQ9Y5B9 1047 aaKnown RBP29.77■■■□□ 2.36
HMGA2-203ENST00000393578 FAM135BQ49AJ0 1406 aa29.76■■■□□ 2.36
HMGA2-203ENST00000393578 ADAMTSL3P82987 1691 aa29.76■■■□□ 2.36
HMGA2-203ENST00000393578 THEMISQ8N1K5 641 aaPredicted RBP29.76■■■□□ 2.35
HMGA2-203ENST00000393578 CDK19Q9BWU1 502 aa29.76■■■□□ 2.35
HMGA2-203ENST00000393578 PLEKHH1Q9ULM0 1364 aa29.76■■■□□ 2.35
HMGA2-203ENST00000393578 CGNL1Q0VF96 1302 aa29.76■■■□□ 2.35
HMGA2-203ENST00000393578 CPS1P31327 1500 aa29.73■■■□□ 2.35
HMGA2-203ENST00000393578 BLMP54132 1417 aaPredicted RBP29.72■■■□□ 2.35
HMGA2-203ENST00000393578 NSD2O96028 1365 aa29.72■■■□□ 2.35
HMGA2-203ENST00000393578 MED14O60244 1454 aa29.72■■■□□ 2.35
HMGA2-203ENST00000393578 NEFLP07196 543 aa29.71■■■□□ 2.35
HMGA2-203ENST00000393578 A0A1W2PP64 1363 aa29.7■■■□□ 2.35
HMGA2-203ENST00000393578 TERF2IPQ9NYB0 399 aa29.7■■■□□ 2.35
HMGA2-203ENST00000393578 MORC1Q86VD1 984 aa29.7■■■□□ 2.34
HMGA2-203ENST00000393578 SMG6Q86US8 1419 aaKnown RBP29.68■■■□□ 2.34
HMGA2-203ENST00000393578 WDR43Q15061 677 aaKnown RBP eCLIP29.67■■■□□ 2.34
HMGA2-203ENST00000393578 CD163L1Q9NR16 1453 aa29.66■■■□□ 2.34
HMGA2-203ENST00000393578 FKBP8Q14318 412 aa29.66■■■□□ 2.34
HMGA2-203ENST00000393578 ADAMTS8Q9UP79 889 aa29.66■■■□□ 2.34
HMGA2-203ENST00000393578 CEP170BQ9Y4F5 1589 aaPredicted RBP29.65■■■□□ 2.34
HMGA2-203ENST00000393578 WASLO00401 505 aaPredicted RBP29.64■■■□□ 2.34
HMGA2-203ENST00000393578 TBX22Q9Y458 520 aa29.63■■■□□ 2.33
HMGA2-203ENST00000393578 HDGFL2Q7Z4V5 671 aaPredicted RBP29.62■■■□□ 2.33
HMGA2-203ENST00000393578 POLR3AO14802 1390 aaPredicted RBP29.61■■■□□ 2.33
HMGA2-203ENST00000393578 ROBO2Q9HCK4 1378 aa29.61■■■□□ 2.33
HMGA2-203ENST00000393578 CABP1Q9NZU7 370 aa29.61■■■□□ 2.33
HMGA2-203ENST00000393578 NUDCQ9Y266 331 aa29.61■■■□□ 2.33
HMGA2-203ENST00000393578 SLC26A8Q96RN1 970 aa29.61■■■□□ 2.33
HMGA2-203ENST00000393578 DIP2AQ14689 1571 aa29.61■■■□□ 2.33
HMGA2-203ENST00000393578 SENP3-EIF4A1A0A087X0R7 540 aa29.6■■■□□ 2.33
HMGA2-203ENST00000393578 ATP7BP35670 1465 aa29.59■■■□□ 2.33
HMGA2-203ENST00000393578 ZNF142P52746 1687 aaPredicted RBP29.58■■■□□ 2.33
HMGA2-203ENST00000393578 PTPRUQ92729 1446 aa29.56■■■□□ 2.32
HMGA2-203ENST00000393578 PDE3BQ13370 1112 aa29.56■■■□□ 2.32
HMGA2-203ENST00000393578 ADGRB2O60241 1585 aa29.54■■■□□ 2.32
HMGA2-203ENST00000393578 TNNT2P45379 298 aaPredicted RBP29.54■■■□□ 2.32
HMGA2-203ENST00000393578 ANKRD26Q9UPS8 1709 aa29.52■■■□□ 2.32
HMGA2-203ENST00000393578 FYB1O15117 783 aa29.52■■■□□ 2.32
HMGA2-203ENST00000393578 SETD1BQ9UPS6 1966 aaKnown RBP29.52■■■□□ 2.32
HMGA2-203ENST00000393578 PPIP5K1Q6PFW1 1433 aa29.51■■■□□ 2.31
HMGA2-203ENST00000393578 NUDT16Q96DE0 195 aaKnown RBP29.51■■■□□ 2.31
HMGA2-203ENST00000393578 AMOTL2Q9Y2J4 779 aa29.51■■■□□ 2.31
HMGA2-203ENST00000393578 SALL2Q9Y467 1007 aaPredicted RBP29.5■■■□□ 2.31
HMGA2-203ENST00000393578 PTCH1Q13635 1447 aa29.5■■■□□ 2.31
HMGA2-203ENST00000393578 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.5■■■□□ 2.31
HMGA2-203ENST00000393578 CCDC61Q9Y6R9 512 aa29.5■■■□□ 2.31
HMGA2-203ENST00000393578 CPSF1Q10570 1443 aaKnown RBP29.49■■■□□ 2.31
HMGA2-203ENST00000393578 MTHFSP49914 203 aa29.48■■■□□ 2.31
HMGA2-203ENST00000393578 GGNBP2Q9H3C7 697 aa29.48■■■□□ 2.31
HMGA2-203ENST00000393578 CFAP53Q96M91 514 aa29.46■■■□□ 2.31
HMGA2-203ENST00000393578 PIK3R4Q99570 1358 aa29.46■■■□□ 2.31
HMGA2-203ENST00000393578 KIF20BQ96Q89 1820 aa29.46■■■□□ 2.31
HMGA2-203ENST00000393578 ANKLE2Q86XL3 938 aa29.45■■■□□ 2.31
HMGA2-203ENST00000393578 SHPRHQ149N8 1683 aa29.45■■■□□ 2.3
HMGA2-203ENST00000393578 CDC42BPGQ6DT37 1551 aa29.44■■■□□ 2.3
HMGA2-203ENST00000393578 XRN1Q8IZH2 1706 aaKnown RBP29.43■■■□□ 2.3
HMGA2-203ENST00000393578 EDC4Q6P2E9 1401 aaKnown RBP29.43■■■□□ 2.3
HMGA2-203ENST00000393578 ERICH6BQ5W0A0 696 aa29.41■■■□□ 2.3
HMGA2-203ENST00000393578 PRR36Q9H6K5 1346 aa29.41■■■□□ 2.3
HMGA2-203ENST00000393578 RNF123Q5XPI4 1314 aa29.38■■■□□ 2.29
HMGA2-203ENST00000393578 CCDC146Q8IYE0 955 aa29.38■■■□□ 2.29
HMGA2-203ENST00000393578 NGEFQ8N5V2 710 aa29.38■■■□□ 2.29
HMGA2-203ENST00000393578 ZNF692Q9BU19 519 aaPredicted RBP29.38■■■□□ 2.29
HMGA2-203ENST00000393578 MON2Q7Z3U7 1717 aa29.37■■■□□ 2.29
HMGA2-203ENST00000393578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.37■■■□□ 2.292e-8■□□□□ 10.4
HMGA2-203ENST00000393578 NCKAP5LQ9HCH0 1330 aa29.37■■■□□ 2.29
HMGA2-203ENST00000393578 AKAP12Q02952 1782 aa29.37■■■□□ 2.29
HMGA2-203ENST00000393578 TOPAZ1Q8N9V7 1692 aa29.36■■■□□ 2.29
HMGA2-203ENST00000393578 CDCA7LQ96GN5 454 aa29.36■■■□□ 2.29
HMGA2-203ENST00000393578 ITSN1Q15811 1721 aa29.36■■■□□ 2.29
HMGA2-203ENST00000393578 ZNF521Q96K83 1311 aa29.36■■■□□ 2.29
HMGA2-203ENST00000393578 IRX6P78412 446 aaPredicted RBP29.35■■■□□ 2.29
HMGA2-203ENST00000393578 APAF1O14727 1248 aa29.33■■■□□ 2.29
HMGA2-203ENST00000393578 PLEKHG3A1L390 1219 aa29.33■■■□□ 2.29
HMGA2-203ENST00000393578 KCNA6P17658 529 aa29.32■■■□□ 2.28
HMGA2-203ENST00000393578 COL3A1P02461 1466 aaPredicted RBP29.29■■■□□ 2.28
HMGA2-203ENST00000393578 RUNDC1Q96C34 613 aa29.29■■■□□ 2.28
HMGA2-203ENST00000393578 CHD2O14647 1828 aaKnown RBP29.28■■■□□ 2.28
HMGA2-203ENST00000393578 GOLGA2Q08379 1002 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms