RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 IRX5P78411 483 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-201ENST00000393077 GABPB1Q06547 395 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-201ENST00000393077 MYRIPQ8NFW9 859 aa9.31□□□□□ -0.92
VTI1A-201ENST00000393077 PHF14O94880 888 aa9.31□□□□□ -0.92
VTI1A-201ENST00000393077 U2AF2P26368 475 aaKnown RBP eCLIP9.31□□□□□ -0.92
VTI1A-201ENST00000393077 RNF123Q5XPI4 1314 aa9.31□□□□□ -0.92
VTI1A-201ENST00000393077 EHBP1L1Q8N3D4 1523 aa9.31□□□□□ -0.92
VTI1A-201ENST00000393077 TRHP20396 242 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-201ENST00000393077 CTR9Q6PD62 1173 aa9.31□□□□□ -0.92
VTI1A-201ENST00000393077 TSC1Q92574 1164 aa9.31□□□□□ -0.92
VTI1A-201ENST00000393077 OGFRQ9NZT2 677 aa9.31□□□□□ -0.92
VTI1A-201ENST00000393077 SAFB2Q14151 953 aaKnown RBP eCLIP9.3□□□□□ -0.92
VTI1A-201ENST00000393077 ANKRD50Q9ULJ7 1429 aa9.3□□□□□ -0.92
VTI1A-201ENST00000393077 MAGI1Q96QZ7 1491 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-201ENST00000393077 KNSTRNQ9Y448 316 aa9.3□□□□□ -0.92
VTI1A-201ENST00000393077 KIF21AQ7Z4S6 1674 aa9.3□□□□□ -0.92
VTI1A-201ENST00000393077 ROCK2O75116 1388 aaKnown RBP9.3□□□□□ -0.92
VTI1A-201ENST00000393077 NUTM2DQ5VT03 806 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-201ENST00000393077 CCDC9Q9Y3X0 531 aaKnown RBP9.3□□□□□ -0.92
VTI1A-201ENST00000393077 ZNF500O60304 480 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-201ENST00000393077 GTF2F1P35269 517 aaKnown RBP eCLIP9.29□□□□□ -0.92
VTI1A-201ENST00000393077 ZNF526Q8TF50 670 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-201ENST00000393077 TNPO1Q92973 898 aaKnown RBP9.29□□□□□ -0.92
VTI1A-201ENST00000393077 CIZ1Q9ULV3 898 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-201ENST00000393077 HFM1A2PYH4 1435 aa9.29□□□□□ -0.92
VTI1A-201ENST00000393077 SETQ01105 290 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-201ENST00000393077 PNISRQ8TF01 805 aaKnown RBP9.29□□□□□ -0.92
VTI1A-201ENST00000393077 RBM25P49756 843 aaKnown RBP9.29□□□□□ -0.92
VTI1A-201ENST00000393077 NLRP13Q86W25 1043 aa9.29□□□□□ -0.92
VTI1A-201ENST00000393077 MYCBPQ99417 103 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-201ENST00000393077 TMX1Q9H3N1 280 aa9.29□□□□□ -0.92
VTI1A-201ENST00000393077 HECW1Q76N89 1606 aa9.29□□□□□ -0.92
VTI1A-201ENST00000393077 ST20-MTHFSA0A0A6YYL1 179 aa9.29□□□□□ -0.92
VTI1A-201ENST00000393077 MYCNP04198 464 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-201ENST00000393077 TDO2P48775 406 aa9.29□□□□□ -0.92
VTI1A-201ENST00000393077 KRT222Q8N1A0 295 aa9.29□□□□□ -0.92
VTI1A-201ENST00000393077 RASSF4Q9H2L5 321 aa9.29□□□□□ -0.92
VTI1A-201ENST00000393077 NAIPQ13075 1403 aa9.28□□□□□ -0.92
VTI1A-201ENST00000393077 U2SURPO15042 1029 aaKnown RBP9.28□□□□□ -0.92
VTI1A-201ENST00000393077 PPP1R9BQ96SB3 815 aa9.28□□□□□ -0.92
VTI1A-201ENST00000393077 RSPH14Q9UHP6 348 aa9.28□□□□□ -0.92
VTI1A-201ENST00000393077 MIA2Q96PC5 1412 aa9.28□□□□□ -0.92
VTI1A-201ENST00000393077 TMF1P82094 1093 aa9.28□□□□□ -0.92
VTI1A-201ENST00000393077 GOLGA2Q08379 1002 aa9.28□□□□□ -0.92
VTI1A-201ENST00000393077 MYBBP1AQ9BQG0 1328 aaKnown RBP9.27□□□□□ -0.93
VTI1A-201ENST00000393077 IFT57Q9NWB7 429 aa9.27□□□□□ -0.93
VTI1A-201ENST00000393077 CGNL1Q0VF96 1302 aa9.27□□□□□ -0.93
VTI1A-201ENST00000393077 CCDC144AA2RUR9 1427 aa9.27□□□□□ -0.93
VTI1A-201ENST00000393077 MAP3K1Q13233 1512 aa9.27□□□□□ -0.93
VTI1A-201ENST00000393077 NUCB2P80303 420 aa9.27□□□□□ -0.93
VTI1A-201ENST00000393077 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
VTI1A-201ENST00000393077 CCDC112Q8NEF3 446 aa9.27□□□□□ -0.93
VTI1A-201ENST00000393077 FOXD4L4Q8WXT5 416 aaPredicted RBP9.27□□□□□ -0.93
VTI1A-201ENST00000393077 PANK3Q9H999 370 aa9.27□□□□□ -0.93
VTI1A-201ENST00000393077 STK26Q9P289 416 aa9.26□□□□□ -0.93
VTI1A-201ENST00000393077 KIF7Q2M1P5 1343 aa9.26□□□□□ -0.93
VTI1A-201ENST00000393077 SRPK2P78362 688 aaKnown RBP9.26□□□□□ -0.93
VTI1A-201ENST00000393077 NOLC1Q14978 699 aaKnown RBP eCLIP9.26□□□□□ -0.93
VTI1A-201ENST00000393077 CDCA8Q53HL2 280 aa9.26□□□□□ -0.93
VTI1A-201ENST00000393077 GAS2L3Q86XJ1 694 aa9.26□□□□□ -0.93
VTI1A-201ENST00000393077 CHMP4CQ96CF2 233 aa9.26□□□□□ -0.93
VTI1A-201ENST00000393077 PRPF40AO75400 957 aaKnown RBP9.26□□□□□ -0.93
VTI1A-201ENST00000393077 KIF16BQ96L93 1317 aa9.26□□□□□ -0.93
VTI1A-201ENST00000393077 ARHGEF11O15085 1522 aa9.25□□□□□ -0.93
VTI1A-201ENST00000393077 SAMD1Q6SPF0 538 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-201ENST00000393077 C10orf67Q8IYJ2 551 aa9.25□□□□□ -0.93
VTI1A-201ENST00000393077 DAPK1P53355 1430 aa9.25□□□□□ -0.93
VTI1A-201ENST00000393077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.25□□□□□ -0.93
VTI1A-201ENST00000393077 ARHGAP5Q13017 1502 aa9.25□□□□□ -0.93
VTI1A-201ENST00000393077 KLHL40Q2TBA0 621 aa9.25□□□□□ -0.93
VTI1A-201ENST00000393077 C20orf194Q5TEA3 1177 aa9.25□□□□□ -0.93
VTI1A-201ENST00000393077 PLCD4Q9BRC7 762 aa9.25□□□□□ -0.93
VTI1A-201ENST00000393077 NOL10Q9BSC4 688 aaKnown RBP9.25□□□□□ -0.93
VTI1A-201ENST00000393077 TSPY26PQ9H489 355 aa9.25□□□□□ -0.93
VTI1A-201ENST00000393077 EFCC1Q9HA90 598 aa9.25□□□□□ -0.93
VTI1A-201ENST00000393077 COG6Q9Y2V7 657 aa9.25□□□□□ -0.93
VTI1A-201ENST00000393077 SUPT6HQ7KZ85 1726 aaKnown RBP9.25□□□□□ -0.93
VTI1A-201ENST00000393077 NRDCO43847 1150 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 VGFO15240 615 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-201ENST00000393077 NPHP1O15259 732 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 ATP2B3Q16720 1220 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 TBC1D32Q96NH3 1257 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 LOC102724159A0A0B4J2E5 919 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 SOX12O15370 315 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 TPM3P06753 285 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 PWP2Q15269 919 aaKnown RBP9.24□□□□□ -0.93
VTI1A-201ENST00000393077 BCL2L12Q9HB09 334 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 PTPRKQ15262 1439 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 C9orf84Q5VXU9 1444 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 GOLIM4O00461 696 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 SLC26A8Q96RN1 970 aa9.24□□□□□ -0.93
VTI1A-201ENST00000393077 SSR1P43307 286 aaKnown RBP9.23□□□□□ -0.93
VTI1A-201ENST00000393077 TPM4P67936 248 aa9.23□□□□□ -0.93
VTI1A-201ENST00000393077 FAM69CQ0P6D2 419 aa9.23□□□□□ -0.93
VTI1A-201ENST00000393077 OS9Q13438 667 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-201ENST00000393077 NBPF8Q3BBV2 869 aa9.23□□□□□ -0.93
VTI1A-201ENST00000393077 NINLQ9Y2I6 1382 aa9.23□□□□□ -0.93
VTI1A-201ENST00000393077 SYCE3A1L190 88 aa9.23□□□□□ -0.93
VTI1A-201ENST00000393077 ARGLU1Q9NWB6 273 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-201ENST00000393077 THOC2Q8NI27 1593 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms