RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 TSR2Q969E8 191 aaKnown RBP17.79■□□□□ 0.44
CCDC57-203ENST00000392343 POLR3AO14802 1390 aaPredicted RBP17.79■□□□□ 0.44
CCDC57-203ENST00000392343 TMEM132EQ6IEE7 984 aa17.78■□□□□ 0.44
CCDC57-203ENST00000392343 XRCC6P12956 609 aaKnown RBP eCLIP17.77■□□□□ 0.44
CCDC57-203ENST00000392343 FTSJ3Q8IY81 847 aaKnown RBP17.77■□□□□ 0.44
CCDC57-203ENST00000392343 NGEFQ8N5V2 710 aa17.77■□□□□ 0.44
CCDC57-203ENST00000392343 RSPH6AQ9H0K4 717 aa17.77■□□□□ 0.44
CCDC57-203ENST00000392343 U2AF1L5P0DN76 240 aaPredicted RBP17.77■□□□□ 0.43
CCDC57-203ENST00000392343 U2AF1Q01081 240 aaKnown RBP eCLIP17.77■□□□□ 0.43
CCDC57-203ENST00000392343 NINLQ9Y2I6 1382 aa17.76■□□□□ 0.43
CCDC57-203ENST00000392343 L1TD1Q5T7N2 865 aaKnown RBP17.76■□□□□ 0.43
CCDC57-203ENST00000392343 PTPRTO14522 1441 aa17.76■□□□□ 0.43
CCDC57-203ENST00000392343 STAC3Q96MF2 364 aa17.75■□□□□ 0.43
CCDC57-203ENST00000392343 MCM4P33991 863 aa17.75■□□□□ 0.43
CCDC57-203ENST00000392343 C22orf23Q9BZE7 217 aa17.75■□□□□ 0.43
CCDC57-203ENST00000392343 GOLGA6L3A6NEY3 463 aa17.74■□□□□ 0.43
CCDC57-203ENST00000392343 MVPQ14764 893 aaKnown RBP17.74■□□□□ 0.43
CCDC57-203ENST00000392343 NUTM2DQ5VT03 806 aaPredicted RBP17.74■□□□□ 0.43
CCDC57-203ENST00000392343 WDR63Q8IWG1 891 aa17.73■□□□□ 0.43
CCDC57-203ENST00000392343 DZIP1LQ8IYY4 767 aaKnown RBP17.73■□□□□ 0.43
CCDC57-203ENST00000392343 KANK1Q14678 1352 aa17.72■□□□□ 0.43
CCDC57-203ENST00000392343 ZKSCAN2Q63HK3 967 aa17.72■□□□□ 0.43
CCDC57-203ENST00000392343 ITPRIPQ8IWB1 547 aa17.72■□□□□ 0.43
CCDC57-203ENST00000392343 SMC4Q9NTJ3 1288 aa17.72■□□□□ 0.43
CCDC57-203ENST00000392343 ABCC1P33527 1531 aa17.72■□□□□ 0.43
CCDC57-203ENST00000392343 SAFB2Q14151 953 aaKnown RBP eCLIP17.71■□□□□ 0.43
CCDC57-203ENST00000392343 UBE2Q2Q8WVN8 375 aa17.71■□□□□ 0.43
CCDC57-203ENST00000392343 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
CCDC57-203ENST00000392343 ABCA6Q8N139 1617 aa17.71■□□□□ 0.43
CCDC57-203ENST00000392343 EXOSC9Q06265 439 aaKnown RBP17.7■□□□□ 0.42
CCDC57-203ENST00000392343 U2SURPO15042 1029 aaKnown RBP17.7■□□□□ 0.42
CCDC57-203ENST00000392343 TRAK2O60296 914 aa17.7■□□□□ 0.42
CCDC57-203ENST00000392343 MYH16Q9H6N6 1097 aa17.7■□□□□ 0.42
CCDC57-203ENST00000392343 CFAP53Q96M91 514 aa17.69■□□□□ 0.42
CCDC57-203ENST00000392343 SHPRHQ149N8 1683 aa17.69■□□□□ 0.42
CCDC57-203ENST00000392343 TRIM27P14373 513 aa17.68■□□□□ 0.42
CCDC57-203ENST00000392343 NOS1P29475 1434 aa17.68■□□□□ 0.42
CCDC57-203ENST00000392343 CHMP5Q9NZZ3 219 aa17.67■□□□□ 0.42
CCDC57-203ENST00000392343 MAP3K4Q9Y6R4 1608 aa17.67■□□□□ 0.42
CCDC57-203ENST00000392343 SSH1Q8WYL5 1049 aa17.67■□□□□ 0.42
CCDC57-203ENST00000392343 CFAP65Q6ZU64 1925 aaKnown RBP17.67■□□□□ 0.42
CCDC57-203ENST00000392343 NAP1L5Q96NT1 182 aaPredicted RBP17.66■□□□□ 0.42
CCDC57-203ENST00000392343 IQSEC2Q5JU85 1478 aa17.66■□□□□ 0.42
CCDC57-203ENST00000392343 FOXD4L1Q9NU39 408 aa17.66■□□□□ 0.42
CCDC57-203ENST00000392343 CHD1O14646 1710 aa17.66■□□□□ 0.42
CCDC57-203ENST00000392343 FSD2A1L4K1 749 aa17.65■□□□□ 0.42
CCDC57-203ENST00000392343 AAMPQ13685 434 aa17.65■□□□□ 0.42
CCDC57-203ENST00000392343 NOB1Q9ULX3 412 aaKnown RBP17.65■□□□□ 0.42
CCDC57-203ENST00000392343 ZFYVE16Q7Z3T8 1539 aa17.65■□□□□ 0.42
CCDC57-203ENST00000392343 CABP2Q9NPB3 220 aa17.65■□□□□ 0.42
CCDC57-203ENST00000392343 HSCBQ8IWL3 235 aa17.64■□□□□ 0.41
CCDC57-203ENST00000392343 LNPKQ9C0E8 428 aa17.64■□□□□ 0.41
CCDC57-203ENST00000392343 TET3O43151 1660 aa17.64■□□□□ 0.41
CCDC57-203ENST00000392343 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
CCDC57-203ENST00000392343 TMEM57Q8N5G2 664 aa17.63■□□□□ 0.41
CCDC57-203ENST00000392343 ZNF518AQ6AHZ1 1483 aa17.63■□□□□ 0.41
CCDC57-203ENST00000392343 RTEL1-TNFRSF6BF6WH68 1400 aa17.63■□□□□ 0.41
CCDC57-203ENST00000392343 ZCCHC11Q5TAX3 1644 aaKnown RBP17.62■□□□□ 0.41
CCDC57-203ENST00000392343 GGNBP2Q9H3C7 697 aa17.62■□□□□ 0.41
CCDC57-203ENST00000392343 KIAA1210Q9ULL0 1709 aa17.62■□□□□ 0.41
CCDC57-203ENST00000392343 ATF7IPQ6VMQ6 1270 aa17.61■□□□□ 0.41
CCDC57-203ENST00000392343 PNNQ9H307 717 aaKnown RBP17.61■□□□□ 0.41
CCDC57-203ENST00000392343 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
CCDC57-203ENST00000392343 GGT6Q6P531 493 aa17.6■□□□□ 0.41
CCDC57-203ENST00000392343 TMPOP42166 694 aaKnown RBP17.6■□□□□ 0.41
CCDC57-203ENST00000392343 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
CCDC57-203ENST00000392343 TRIM35Q9UPQ4 493 aa17.6■□□□□ 0.41
CCDC57-203ENST00000392343 MYOM2P54296 1465 aa17.6■□□□□ 0.41
CCDC57-203ENST00000392343 MROH2AA6NES4 1674 aa17.59■□□□□ 0.41
CCDC57-203ENST00000392343 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
CCDC57-203ENST00000392343 KIF1BO60333 1816 aa17.59■□□□□ 0.41
CCDC57-203ENST00000392343 HDAC1Q13547 482 aaPredicted RBP17.58■□□□□ 0.41
CCDC57-203ENST00000392343 C14orf93Q9H972 538 aaKnown RBP17.58■□□□□ 0.41
CCDC57-203ENST00000392343 GRPEL1Q9HAV7 217 aa17.58■□□□□ 0.4
CCDC57-203ENST00000392343 ATP7AQ04656 1500 aa17.58■□□□□ 0.4
CCDC57-203ENST00000392343 DEPDC5O75140 1603 aa17.58■□□□□ 0.4
CCDC57-203ENST00000392343 STK26Q9P289 416 aa17.58■□□□□ 0.4
CCDC57-203ENST00000392343 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
CCDC57-203ENST00000392343 TNPO1Q92973 898 aaKnown RBP17.57■□□□□ 0.4
CCDC57-203ENST00000392343 C1orf115Q9H7X2 142 aa17.57■□□□□ 0.4
CCDC57-203ENST00000392343 ZMYM3Q14202 1370 aa17.57■□□□□ 0.4
CCDC57-203ENST00000392343 RIPK4P57078 832 aa17.57■□□□□ 0.4
CCDC57-203ENST00000392343 HSP90AB1P08238 724 aaKnown RBP17.56■□□□□ 0.4
CCDC57-203ENST00000392343 MRE11P49959 708 aa17.56■□□□□ 0.4
CCDC57-203ENST00000392343 SMC5Q8IY18 1101 aa17.56■□□□□ 0.4
CCDC57-203ENST00000392343 GAS2L3Q86XJ1 694 aa17.56■□□□□ 0.4
CCDC57-203ENST00000392343 CD109Q6YHK3 1445 aa17.55■□□□□ 0.4
CCDC57-203ENST00000392343 CD2BP2O95400 341 aaKnown RBP17.55■□□□□ 0.4
CCDC57-203ENST00000392343 PLEKHF1Q96S99 279 aa17.55■□□□□ 0.4
CCDC57-203ENST00000392343 RBM42Q9BTD8 480 aaKnown RBP17.55■□□□□ 0.4
CCDC57-203ENST00000392343 ZBTB40Q9NUA8 1239 aa17.55■□□□□ 0.4
CCDC57-203ENST00000392343 FANCAO15360 1455 aa17.55■□□□□ 0.4
CCDC57-203ENST00000392343 HSP90AA1P07900 732 aaKnown RBP17.54■□□□□ 0.4
CCDC57-203ENST00000392343 CLCN1P35523 988 aa17.54■□□□□ 0.4
CCDC57-203ENST00000392343 FBLN1P23142 703 aa17.54■□□□□ 0.4
CCDC57-203ENST00000392343 ERBB4Q15303 1308 aa17.54■□□□□ 0.4
CCDC57-203ENST00000392343 QRICH2Q9H0J4 1663 aa17.54■□□□□ 0.4
CCDC57-203ENST00000392343 DDX11L8A8MPP1 907 aa17.54■□□□□ 0.4
CCDC57-203ENST00000392343 SRPK2P78362 688 aaKnown RBP17.54■□□□□ 0.4
CCDC57-203ENST00000392343 ANKRD45Q5TZF3 282 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms