RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 TECPR2O15040 1411 aa27.63■■■□□ 2.01
CPNE9-202ENST00000383831 PLEKHH1Q9ULM0 1364 aa27.63■■■□□ 2.01
CPNE9-202ENST00000383831 AMER1Q5JTC6 1135 aaPredicted RBP27.63■■■□□ 2.01
CPNE9-202ENST00000383831 WAPLQ7Z5K2 1190 aa27.62■■■□□ 2.01
CPNE9-202ENST00000383831 CABP2Q9NPB3 220 aa27.62■■■□□ 2.01
CPNE9-202ENST00000383831 CPS1P31327 1500 aa27.61■■■□□ 2.01
CPNE9-202ENST00000383831 TMC1Q8TDI8 760 aa27.6■■■□□ 2.01
CPNE9-202ENST00000383831 CARD14Q9BXL6 1004 aa27.6■■■□□ 2.01
CPNE9-202ENST00000383831 SLC12A5Q9H2X9 1139 aa27.6■■■□□ 2.01
CPNE9-202ENST00000383831 BRD4O60885 1362 aaPredicted RBP27.6■■■□□ 2.01
CPNE9-202ENST00000383831 FAM9BQ8IZU0 186 aa27.59■■■□□ 2.01
CPNE9-202ENST00000383831 NPC1L1Q9UHC9 1359 aa27.58■■■□□ 2.01
CPNE9-202ENST00000383831 FAM135BQ49AJ0 1406 aa27.58■■■□□ 2.01
CPNE9-202ENST00000383831 SETD1BQ9UPS6 1966 aaKnown RBP27.57■■■□□ 2
CPNE9-202ENST00000383831 SRPK2P78362 688 aaKnown RBP27.57■■■□□ 2
CPNE9-202ENST00000383831 SLC26A8Q96RN1 970 aa27.57■■■□□ 2
CPNE9-202ENST00000383831 SIRT1Q96EB6 747 aa27.56■■■□□ 2
CPNE9-202ENST00000383831 NLRP13Q86W25 1043 aa27.55■■■□□ 2
CPNE9-202ENST00000383831 DIP2AQ14689 1571 aa27.55■■■□□ 2
CPNE9-202ENST00000383831 ATAD2Q6PL18 1390 aa27.54■■■□□ 2
CPNE9-202ENST00000383831 CDK19Q9BWU1 502 aa27.53■■■□□ 2
CPNE9-202ENST00000383831 PTPRUQ92729 1446 aa27.53■■■□□ 2
CPNE9-202ENST00000383831 NSD3Q9BZ95 1437 aa27.53■■■□□ 2
CPNE9-202ENST00000383831 TBX22Q9Y458 520 aa27.53■■■□□ 2
CPNE9-202ENST00000383831 NINLQ9Y2I6 1382 aa27.52■■■□□ 2
CPNE9-202ENST00000383831 ANKRD36BQ8N2N9 1353 aa27.52■■■□□ 2
CPNE9-202ENST00000383831 ROBO2Q9HCK4 1378 aa27.52■■■□□ 2
CPNE9-202ENST00000383831 HNRNPUQ00839 825 aaKnown RBP eCLIP27.5■■□□□ 1.99
CPNE9-202ENST00000383831 PNISRQ8TF01 805 aaKnown RBP27.5■■□□□ 1.99
CPNE9-202ENST00000383831 USP32Q8NFA0 1604 aa27.49■■□□□ 1.99
CPNE9-202ENST00000383831 ANKLE2Q86XL3 938 aa27.45■■□□□ 1.99
CPNE9-202ENST00000383831 PPP2R1AP30153 589 aa27.45■■□□□ 1.98
CPNE9-202ENST00000383831 WASLO00401 505 aaPredicted RBP27.44■■□□□ 1.98
CPNE9-202ENST00000383831 A0A1W2PP64 1363 aa27.44■■□□□ 1.98
CPNE9-202ENST00000383831 AMOTL2Q9Y2J4 779 aa27.43■■□□□ 1.98
CPNE9-202ENST00000383831 CD163L1Q9NR16 1453 aa27.43■■□□□ 1.98
CPNE9-202ENST00000383831 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.43■■□□□ 1.98
CPNE9-202ENST00000383831 XRN1Q8IZH2 1706 aaKnown RBP27.41■■□□□ 1.98
CPNE9-202ENST00000383831 ADGRB2O60241 1585 aa27.41■■□□□ 1.98
CPNE9-202ENST00000383831 PTCH1Q13635 1447 aa27.4■■□□□ 1.98
CPNE9-202ENST00000383831 CGNL1Q0VF96 1302 aa27.39■■□□□ 1.97
CPNE9-202ENST00000383831 SCAF1Q9H7N4 1312 aaKnown RBP27.39■■□□□ 1.97
CPNE9-202ENST00000383831 CABP1Q9NZU7 370 aa27.38■■□□□ 1.97
CPNE9-202ENST00000383831 PIK3R4Q99570 1358 aa27.38■■□□□ 1.97
CPNE9-202ENST00000383831 TERF2IPQ9NYB0 399 aa27.37■■□□□ 1.97
CPNE9-202ENST00000383831 ATP7BP35670 1465 aa27.35■■□□□ 1.97
CPNE9-202ENST00000383831 NSD2O96028 1365 aa27.34■■□□□ 1.97
CPNE9-202ENST00000383831 HDGFL2Q7Z4V5 671 aaPredicted RBP27.33■■□□□ 1.97
CPNE9-202ENST00000383831 GTF3C3Q9Y5Q9 886 aa27.33■■□□□ 1.97
CPNE9-202ENST00000383831 MORC1Q86VD1 984 aa27.32■■□□□ 1.96
CPNE9-202ENST00000383831 PPIP5K1Q6PFW1 1433 aa27.32■■□□□ 1.96
CPNE9-202ENST00000383831 NUDT16Q96DE0 195 aaKnown RBP27.32■■□□□ 1.96
CPNE9-202ENST00000383831 ZBED9Q6R2W3 1325 aa27.32■■□□□ 1.96
CPNE9-202ENST00000383831 NPHP4O75161 1426 aaPredicted RBP27.31■■□□□ 1.96
CPNE9-202ENST00000383831 CHD2O14647 1828 aaKnown RBP27.3■■□□□ 1.96
CPNE9-202ENST00000383831 KCNA6P17658 529 aa27.3■■□□□ 1.96
CPNE9-202ENST00000383831 PRR36Q9H6K5 1346 aa27.29■■□□□ 1.96
CPNE9-202ENST00000383831 NCKAP5LQ9HCH0 1330 aa27.27■■□□□ 1.96
CPNE9-202ENST00000383831 CCDC61Q9Y6R9 512 aa27.27■■□□□ 1.96
CPNE9-202ENST00000383831 CDC42BPGQ6DT37 1551 aa27.27■■□□□ 1.96
CPNE9-202ENST00000383831 CPSF1Q10570 1443 aaKnown RBP27.26■■□□□ 1.95
CPNE9-202ENST00000383831 ANKRD26Q9UPS8 1709 aa27.26■■□□□ 1.95
CPNE9-202ENST00000383831 TOPAZ1Q8N9V7 1692 aa27.26■■□□□ 1.95
CPNE9-202ENST00000383831 INSRP06213 1382 aa27.24■■□□□ 1.95
CPNE9-202ENST00000383831 KIF20BQ96Q89 1820 aa27.24■■□□□ 1.95
CPNE9-202ENST00000383831 TNNT2P45379 298 aaPredicted RBP27.24■■□□□ 1.95
CPNE9-202ENST00000383831 FYB1O15117 783 aa27.22■■□□□ 1.95
CPNE9-202ENST00000383831 BLMP54132 1417 aaPredicted RBP27.22■■□□□ 1.95
CPNE9-202ENST00000383831 AKAP12Q02952 1782 aa27.22■■□□□ 1.95
CPNE9-202ENST00000383831 GGNBP2Q9H3C7 697 aa27.22■■□□□ 1.95
CPNE9-202ENST00000383831 ITSN1Q15811 1721 aa27.22■■□□□ 1.95
CPNE9-202ENST00000383831 MON2Q7Z3U7 1717 aa27.21■■□□□ 1.95
CPNE9-202ENST00000383831 KDM4FA0A1W2PPD8 638 aa27.2■■□□□ 1.94
CPNE9-202ENST00000383831 POLR3AO14802 1390 aaPredicted RBP27.19■■□□□ 1.94
CPNE9-202ENST00000383831 EDC4Q6P2E9 1401 aaKnown RBP27.19■■□□□ 1.94
CPNE9-202ENST00000383831 SENP3-EIF4A1A0A087X0R7 540 aa27.18■■□□□ 1.94
CPNE9-202ENST00000383831 NUTM2FA1L443 756 aa27.18■■□□□ 1.94
CPNE9-202ENST00000383831 WDR43Q15061 677 aaKnown RBP eCLIP27.18■■□□□ 1.94
CPNE9-202ENST00000383831 ADAMTS8Q9UP79 889 aa27.18■■□□□ 1.94
CPNE9-202ENST00000383831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.16■■□□□ 1.94
CPNE9-202ENST00000383831 NKTRP30414 1462 aaKnown RBP27.16■■□□□ 1.94
CPNE9-202ENST00000383831 NALCNQ8IZF0 1738 aa27.15■■□□□ 1.94
CPNE9-202ENST00000383831 PLEKHG3A1L390 1219 aa27.14■■□□□ 1.93
CPNE9-202ENST00000383831 NWD1Q149M9 1564 aa27.13■■□□□ 1.93
CPNE9-202ENST00000383831 MTHFSP49914 203 aa27.13■■□□□ 1.93
CPNE9-202ENST00000383831 FMN2Q9NZ56 1722 aa27.13■■□□□ 1.93
CPNE9-202ENST00000383831 ZNF692Q9BU19 519 aaPredicted RBP27.12■■□□□ 1.93
CPNE9-202ENST00000383831 SHPRHQ149N8 1683 aa27.12■■□□□ 1.93
CPNE9-202ENST00000383831 RGPD8O14715 1765 aaPredicted RBP27.12■■□□□ 1.93
CPNE9-202ENST00000383831 ACEP12821 1306 aa27.11■■□□□ 1.93
CPNE9-202ENST00000383831 NRKQ7Z2Y5 1582 aa27.1■■□□□ 1.93
CPNE9-202ENST00000383831 ANKARQ7Z5J8 1434 aa27.1■■□□□ 1.93
CPNE9-202ENST00000383831 NME9Q86XW9 330 aa27.08■■□□□ 1.93
CPNE9-202ENST00000383831 RBM33Q96EV2 1170 aaKnown RBP27.07■■□□□ 1.92
CPNE9-202ENST00000383831 HSPA2P54652 639 aa27.07■■□□□ 1.92
CPNE9-202ENST00000383831 CFAP53Q96M91 514 aa27.06■■□□□ 1.92
CPNE9-202ENST00000383831 USP6P35125 1406 aa27.06■■□□□ 1.92
CPNE9-202ENST00000383831 ADGRL3Q9HAR2 1447 aa27.06■■□□□ 1.92
CPNE9-202ENST00000383831 LMTK3Q96Q04 1460 aa27.04■■□□□ 1.92
CPNE9-202ENST00000383831 SALL2Q9Y467 1007 aaPredicted RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms