RNA–Protein interactions for RNA: ENST00000382254.5

CDH12-201, Transcript of cadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH12, Length 4,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-201ENST00000382254 DISP3Q9P2K9 1392 aa9.08□□□□□ -0.96
CDH12-201ENST00000382254 NOB1Q9ULX3 412 aaKnown RBP9.08□□□□□ -0.96
CDH12-201ENST00000382254 HMOX1P09601 288 aa9.08□□□□□ -0.96
CDH12-201ENST00000382254 ANO2Q9NQ90 1003 aa9.08□□□□□ -0.96
CDH12-201ENST00000382254 ARHGAP5Q13017 1502 aa9.07□□□□□ -0.96
CDH12-201ENST00000382254 MLECQ14165 292 aa9.07□□□□□ -0.96
CDH12-201ENST00000382254 INTS3Q68E01 1043 aaKnown RBP9.07□□□□□ -0.96
CDH12-201ENST00000382254 MPNDQ8N594 471 aa9.07□□□□□ -0.96
CDH12-201ENST00000382254 ISY1Q9ULR0 285 aaKnown RBP9.07□□□□□ -0.96
CDH12-201ENST00000382254 API5Q9BZZ5 524 aaKnown RBP9.07□□□□□ -0.96
CDH12-201ENST00000382254 PANK2Q9BZ23 570 aa9.07□□□□□ -0.96
CDH12-201ENST00000382254 GPATCH8Q9UKJ3 1502 aaKnown RBP9.07□□□□□ -0.96
CDH12-201ENST00000382254 MRC2Q9UBG0 1479 aa9.07□□□□□ -0.96
CDH12-201ENST00000382254 LRPPRCP42704 1394 aaKnown RBP9.06□□□□□ -0.96
CDH12-201ENST00000382254 CHMP3Q9Y3E7 222 aa9.06□□□□□ -0.96
CDH12-201ENST00000382254 TCOF1Q13428 1488 aaKnown RBP9.06□□□□□ -0.96
CDH12-201ENST00000382254 RARSP54136 660 aaKnown RBP9.06□□□□□ -0.96
CDH12-201ENST00000382254 ATF7IPQ6VMQ6 1270 aa9.06□□□□□ -0.96
CDH12-201ENST00000382254 NINLQ9Y2I6 1382 aa9.06□□□□□ -0.96
CDH12-201ENST00000382254 K7ELQ4 463 aaPredicted RBP9.06□□□□□ -0.96
CDH12-201ENST00000382254 CABP2Q9NPB3 220 aa9.06□□□□□ -0.96
CDH12-201ENST00000382254 SYNJ2O15056 1496 aa9.06□□□□□ -0.96
CDH12-201ENST00000382254 RNF123Q5XPI4 1314 aa9.06□□□□□ -0.96
CDH12-201ENST00000382254 MAGI3Q5TCQ9 1506 aa9.06□□□□□ -0.96
CDH12-201ENST00000382254 WDR63Q8IWG1 891 aa9.05□□□□□ -0.96
CDH12-201ENST00000382254 STAC3Q96MF2 364 aa9.05□□□□□ -0.96
CDH12-201ENST00000382254 CTTNBP2Q8WZ74 1663 aa9.05□□□□□ -0.96
CDH12-201ENST00000382254 NUTM2FA1L443 756 aa9.05□□□□□ -0.96
CDH12-201ENST00000382254 XRCC6P12956 609 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDH12-201ENST00000382254 NKTRP30414 1462 aaKnown RBP9.05□□□□□ -0.96
CDH12-201ENST00000382254 NUP153P49790 1475 aaKnown RBP9.05□□□□□ -0.96
CDH12-201ENST00000382254 TEX14Q8IWB6 1497 aa9.05□□□□□ -0.96
CDH12-201ENST00000382254 LAMC3Q9Y6N6 1575 aa9.05□□□□□ -0.96
CDH12-201ENST00000382254 LMOD2Q6P5Q4 547 aa9.05□□□□□ -0.96
CDH12-201ENST00000382254 MAP7D2Q96T17 732 aa9.05□□□□□ -0.96
CDH12-201ENST00000382254 IFT140Q96RY7 1462 aa9.04□□□□□ -0.96
CDH12-201ENST00000382254 TBC1D32Q96NH3 1257 aa9.04□□□□□ -0.96
CDH12-201ENST00000382254 MAGI1Q96QZ7 1491 aaPredicted RBP9.04□□□□□ -0.96
CDH12-201ENST00000382254 VGFO15240 615 aaPredicted RBP9.04□□□□□ -0.96
CDH12-201ENST00000382254 PER1O15534 1290 aaPredicted RBP9.04□□□□□ -0.96
CDH12-201ENST00000382254 NEK4P51957 841 aa9.04□□□□□ -0.96
CDH12-201ENST00000382254 CIZ1Q9ULV3 898 aaPredicted RBP9.04□□□□□ -0.96
CDH12-201ENST00000382254 KDM6BO15054 1643 aa9.04□□□□□ -0.96
CDH12-201ENST00000382254 RABEP1Q15276 862 aa9.04□□□□□ -0.96
CDH12-201ENST00000382254 CHD1LQ86WJ1 897 aa9.04□□□□□ -0.96
CDH12-201ENST00000382254 CCDC39Q9UFE4 941 aa9.04□□□□□ -0.96
CDH12-201ENST00000382254 PLEKHH2Q8IVE3 1493 aa9.04□□□□□ -0.96
CDH12-201ENST00000382254 PZPP20742 1482 aa9.03□□□□□ -0.96
CDH12-201ENST00000382254 SPATA31E1Q6ZUB1 1445 aa9.03□□□□□ -0.96
CDH12-201ENST00000382254 SEC24BO95487 1268 aa9.03□□□□□ -0.96
CDH12-201ENST00000382254 TMEM57Q8N5G2 664 aa9.03□□□□□ -0.96
CDH12-201ENST00000382254 GNAI1P63096 354 aa9.03□□□□□ -0.96
CDH12-201ENST00000382254 ZSCAN30Q86W11 494 aa9.03□□□□□ -0.96
CDH12-201ENST00000382254 ZNF592Q92610 1267 aa9.03□□□□□ -0.96
CDH12-201ENST00000382254 TNPO1Q92973 898 aaKnown RBP9.03□□□□□ -0.96
CDH12-201ENST00000382254 TESK2Q96S53 571 aa9.03□□□□□ -0.96
CDH12-201ENST00000382254 BCL11BQ9C0K0 894 aaPredicted RBP9.03□□□□□ -0.96
CDH12-201ENST00000382254 ATP6V1DQ9Y5K8 247 aa9.03□□□□□ -0.96
CDH12-201ENST00000382254 RALGAPBQ86X10 1494 aa9.02□□□□□ -0.97
CDH12-201ENST00000382254 PARD3Q8TEW0 1356 aa9.02□□□□□ -0.97
CDH12-201ENST00000382254 NECTIN2Q92692 538 aa9.02□□□□□ -0.97
CDH12-201ENST00000382254 GCC1Q96CN9 775 aa9.02□□□□□ -0.97
CDH12-201ENST00000382254 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
CDH12-201ENST00000382254 GRIN2AQ12879 1464 aa9.02□□□□□ -0.97
CDH12-201ENST00000382254 HTATSF1O43719 755 aaKnown RBP9.02□□□□□ -0.97
CDH12-201ENST00000382254 PRKAR2BP31323 418 aa9.02□□□□□ -0.97
CDH12-201ENST00000382254 ZNF771Q7L3S4 317 aaPredicted RBP9.02□□□□□ -0.97
CDH12-201ENST00000382254 UQCRHLA0A096LP55 91 aa9.01□□□□□ -0.97
CDH12-201ENST00000382254 VPS37CA5D8V6 355 aaPredicted RBP9.01□□□□□ -0.97
CDH12-201ENST00000382254 MBD3O95983 291 aa9.01□□□□□ -0.97
CDH12-201ENST00000382254 UQCRHP07919 91 aa9.01□□□□□ -0.97
CDH12-201ENST00000382254 SSH1Q8WYL5 1049 aa9.01□□□□□ -0.97
CDH12-201ENST00000382254 SSFA2P28290 1259 aa9.01□□□□□ -0.97
CDH12-201ENST00000382254 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDH12-201ENST00000382254 CCDC141Q6ZP82 1450 aa9.01□□□□□ -0.97
CDH12-201ENST00000382254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.01□□□□□ -0.97
CDH12-201ENST00000382254 HSP90B1P14625 803 aaKnown RBP9.01□□□□□ -0.97
CDH12-201ENST00000382254 CLCN1P35523 988 aa9.01□□□□□ -0.97
CDH12-201ENST00000382254 MTERF4Q7Z6M4 381 aaKnown RBP9.01□□□□□ -0.97
CDH12-201ENST00000382254 RRAGDQ9NQL2 400 aaPredicted RBP9.01□□□□□ -0.97
CDH12-201ENST00000382254 COG3Q96JB2 828 aa9□□□□□ -0.97
CDH12-201ENST00000382254 ZMYND15Q9H091 742 aa9□□□□□ -0.97
CDH12-201ENST00000382254 PLEKHH1Q9ULM0 1364 aa9□□□□□ -0.97
CDH12-201ENST00000382254 SPINK5Q9NQ38 1064 aaPredicted RBP9□□□□□ -0.97
CDH12-201ENST00000382254 SMC3Q9UQE7 1217 aa9□□□□□ -0.97
CDH12-201ENST00000382254 A0A0U1RQG5 324 aaPredicted RBP8.99□□□□□ -0.97
CDH12-201ENST00000382254 GOLGA6L19H0YKK7 550 aa8.99□□□□□ -0.97
CDH12-201ENST00000382254 TWISTNBQ3B726 338 aaPredicted RBP8.99□□□□□ -0.97
CDH12-201ENST00000382254 LTV1Q96GA3 475 aaPredicted RBP8.99□□□□□ -0.97
CDH12-201ENST00000382254 TSPY26PQ9H489 355 aa8.99□□□□□ -0.97
CDH12-201ENST00000382254 TNNQ9UQP3 1299 aa8.99□□□□□ -0.97
CDH12-201ENST00000382254 SCAPERQ9BY12 1400 aa8.99□□□□□ -0.97
CDH12-201ENST00000382254 BECN2A8MW95 431 aa8.99□□□□□ -0.97
CDH12-201ENST00000382254 CT47B1P0C2W7 299 aaPredicted RBP8.99□□□□□ -0.97
CDH12-201ENST00000382254 XPCQ01831 940 aaPredicted RBP8.99□□□□□ -0.97
CDH12-201ENST00000382254 FKBP5Q13451 457 aaPredicted RBP8.99□□□□□ -0.97
CDH12-201ENST00000382254 CCDC27Q2M243 656 aa8.99□□□□□ -0.97
CDH12-201ENST00000382254 GPATCH3Q96I76 525 aa8.99□□□□□ -0.97
CDH12-201ENST00000382254 DIAPH3Q9NSV4 1193 aa8.99□□□□□ -0.97
CDH12-201ENST00000382254 WDR62O43379 1518 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms