RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 DLC1Q96QB1 1528 aa17.63■□□□□ 0.41
LCMT1-201ENST00000380962 CCDC136Q96JN2 1154 aa17.62■□□□□ 0.41
LCMT1-201ENST00000380962 ATAD2Q6PL18 1390 aa17.62■□□□□ 0.41
LCMT1-201ENST00000380962 YTHDC2Q9H6S0 1430 aaKnown RBP17.62■□□□□ 0.41
LCMT1-201ENST00000380962 PLEKHH1Q9ULM0 1364 aa17.61■□□□□ 0.41
LCMT1-201ENST00000380962 ALKQ9UM73 1620 aa17.61■□□□□ 0.41
LCMT1-201ENST00000380962 CDCA7LQ96GN5 454 aa17.61■□□□□ 0.41
LCMT1-201ENST00000380962 A2ML1A8K2U0 1454 aa17.61■□□□□ 0.41
LCMT1-201ENST00000380962 GOLGA2Q08379 1002 aa17.6■□□□□ 0.41
LCMT1-201ENST00000380962 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
LCMT1-201ENST00000380962 MORC1Q86VD1 984 aa17.6■□□□□ 0.41
LCMT1-201ENST00000380962 SLC12A5Q9H2X9 1139 aa17.6■□□□□ 0.41
LCMT1-201ENST00000380962 SALL2Q9Y467 1007 aaPredicted RBP17.59■□□□□ 0.41
LCMT1-201ENST00000380962 FANCIQ9NVI1 1328 aa17.59■□□□□ 0.41
LCMT1-201ENST00000380962 MED14O60244 1454 aa17.58■□□□□ 0.41
LCMT1-201ENST00000380962 ILDR1Q86SU0 546 aaPredicted RBP17.58■□□□□ 0.41
LCMT1-201ENST00000380962 DUSP27Q5VZP5 1158 aa17.57■□□□□ 0.4
LCMT1-201ENST00000380962 TRMT2AQ8IZ69 625 aaKnown RBP17.57■□□□□ 0.4
LCMT1-201ENST00000380962 ABCC11Q96J66 1382 aa17.57■□□□□ 0.4
LCMT1-201ENST00000380962 FBXO31Q5XUX0 539 aaPredicted RBP17.57■□□□□ 0.4
LCMT1-201ENST00000380962 SHPRHQ149N8 1683 aa17.56■□□□□ 0.4
LCMT1-201ENST00000380962 SENP3-EIF4A1A0A087X0R7 540 aa17.56■□□□□ 0.4
LCMT1-201ENST00000380962 SLFN5Q08AF3 891 aa17.56■□□□□ 0.4
LCMT1-201ENST00000380962 RIMS2Q9UQ26 1411 aa17.55■□□□□ 0.4
LCMT1-201ENST00000380962 NUTM2DQ5VT03 806 aaPredicted RBP17.55■□□□□ 0.4
LCMT1-201ENST00000380962 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
LCMT1-201ENST00000380962 STAG3Q9UJ98 1225 aa17.55■□□□□ 0.4
LCMT1-201ENST00000380962 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.54■□□□□ 0.4
LCMT1-201ENST00000380962 E9PSI1 815 aa17.53■□□□□ 0.4
LCMT1-201ENST00000380962 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
LCMT1-201ENST00000380962 SETD1AO15047 1707 aaKnown RBP17.53■□□□□ 0.4
LCMT1-201ENST00000380962 NKTRP30414 1462 aaKnown RBP17.52■□□□□ 0.39
LCMT1-201ENST00000380962 EXOC6Q8TAG9 804 aa17.52■□□□□ 0.39
LCMT1-201ENST00000380962 TERF2IPQ9NYB0 399 aa17.52■□□□□ 0.39
LCMT1-201ENST00000380962 ANKRD26Q9UPS8 1709 aa17.51■□□□□ 0.39
LCMT1-201ENST00000380962 IQSEC2Q5JU85 1478 aa17.51■□□□□ 0.39
LCMT1-201ENST00000380962 APAF1O14727 1248 aa17.51■□□□□ 0.39
LCMT1-201ENST00000380962 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
LCMT1-201ENST00000380962 POGKQ9P215 609 aa17.51■□□□□ 0.39
LCMT1-201ENST00000380962 A0A1W2PP64 1363 aa17.51■□□□□ 0.39
LCMT1-201ENST00000380962 HDGFP51858 240 aaKnown RBP17.5■□□□□ 0.39
LCMT1-201ENST00000380962 PRAM1Q96QH2 718 aa17.5■□□□□ 0.39
LCMT1-201ENST00000380962 RUNDC1Q96C34 613 aa17.49■□□□□ 0.39
LCMT1-201ENST00000380962 SIRT1Q96EB6 747 aa17.49■□□□□ 0.39
LCMT1-201ENST00000380962 ZMYM3Q14202 1370 aa17.49■□□□□ 0.39
LCMT1-201ENST00000380962 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
LCMT1-201ENST00000380962 STK26Q9P289 416 aa17.48■□□□□ 0.39
LCMT1-201ENST00000380962 KNDC1Q76NI1 1749 aa17.48■□□□□ 0.39
LCMT1-201ENST00000380962 ATP7BP35670 1465 aa17.47■□□□□ 0.39
LCMT1-201ENST00000380962 CD163L1Q9NR16 1453 aa17.47■□□□□ 0.39
LCMT1-201ENST00000380962 CCDC27Q2M243 656 aa17.47■□□□□ 0.39
LCMT1-201ENST00000380962 CCDC146Q8IYE0 955 aa17.47■□□□□ 0.39
LCMT1-201ENST00000380962 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
LCMT1-201ENST00000380962 ESF1Q9H501 851 aaKnown RBP17.47■□□□□ 0.39
LCMT1-201ENST00000380962 HDGFL2Q7Z4V5 671 aaPredicted RBP17.47■□□□□ 0.39
LCMT1-201ENST00000380962 NLRP1Q9C000 1473 aa17.46■□□□□ 0.39
LCMT1-201ENST00000380962 TECPR2O15040 1411 aa17.46■□□□□ 0.39
LCMT1-201ENST00000380962 MTHFSP49914 203 aa17.46■□□□□ 0.39
LCMT1-201ENST00000380962 NRXN3Q9Y4C0 1643 aa17.46■□□□□ 0.38
LCMT1-201ENST00000380962 FAM135BQ49AJ0 1406 aa17.45■□□□□ 0.38
LCMT1-201ENST00000380962 WDR63Q8IWG1 891 aa17.45■□□□□ 0.38
LCMT1-201ENST00000380962 TNRQ92752 1358 aa17.44■□□□□ 0.38
LCMT1-201ENST00000380962 MINK1Q8N4C8 1332 aaPredicted RBP17.44■□□□□ 0.38
LCMT1-201ENST00000380962 ADGRB2O60241 1585 aa17.44■□□□□ 0.38
LCMT1-201ENST00000380962 TCERG1O14776 1098 aaKnown RBP17.43■□□□□ 0.38
LCMT1-201ENST00000380962 WWC1Q8IX03 1113 aa17.43■□□□□ 0.38
LCMT1-201ENST00000380962 MS4A1P11836 297 aa17.42■□□□□ 0.38
LCMT1-201ENST00000380962 CRBNQ96SW2 442 aa17.42■□□□□ 0.38
LCMT1-201ENST00000380962 CDK19Q9BWU1 502 aa17.42■□□□□ 0.38
LCMT1-201ENST00000380962 CPS1P31327 1500 aa17.42■□□□□ 0.38
LCMT1-201ENST00000380962 COL3A1P02461 1466 aaPredicted RBP17.42■□□□□ 0.38
LCMT1-201ENST00000380962 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
LCMT1-201ENST00000380962 KIF20BQ96Q89 1820 aa17.41■□□□□ 0.38
LCMT1-201ENST00000380962 MLECQ14165 292 aa17.4■□□□□ 0.38
LCMT1-201ENST00000380962 FYB1O15117 783 aa17.39■□□□□ 0.37
LCMT1-201ENST00000380962 PLIN1O60240 522 aa17.39■□□□□ 0.37
LCMT1-201ENST00000380962 PNPLA6Q8IY17 1366 aa17.39■□□□□ 0.37
LCMT1-201ENST00000380962 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
LCMT1-201ENST00000380962 TNNT2P45379 298 aaPredicted RBP17.38■□□□□ 0.37
LCMT1-201ENST00000380962 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
LCMT1-201ENST00000380962 TMEM2Q9UHN6 1383 aa17.38■□□□□ 0.37
LCMT1-201ENST00000380962 CDC42BPGQ6DT37 1551 aa17.38■□□□□ 0.37
LCMT1-201ENST00000380962 ANP32EQ9BTT0 268 aa17.37■□□□□ 0.37
LCMT1-201ENST00000380962 PNNQ9H307 717 aaKnown RBP17.37■□□□□ 0.37
LCMT1-201ENST00000380962 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
LCMT1-201ENST00000380962 PDE3AQ14432 1141 aa17.37■□□□□ 0.37
LCMT1-201ENST00000380962 EDC4Q6P2E9 1401 aaKnown RBP17.36■□□□□ 0.37
LCMT1-201ENST00000380962 CT47B1P0C2W7 299 aaPredicted RBP17.36■□□□□ 0.37
LCMT1-201ENST00000380962 AAMPQ13685 434 aa17.36■□□□□ 0.37
LCMT1-201ENST00000380962 CPSF1Q10570 1443 aaKnown RBP17.36■□□□□ 0.37
LCMT1-201ENST00000380962 WASLO00401 505 aaPredicted RBP17.35■□□□□ 0.37
LCMT1-201ENST00000380962 CENPQQ7L2Z9 268 aaPredicted RBP17.35■□□□□ 0.37
LCMT1-201ENST00000380962 CABP1Q9NZU7 370 aa17.35■□□□□ 0.37
LCMT1-201ENST00000380962 METP08581 1390 aa17.34■□□□□ 0.37
LCMT1-201ENST00000380962 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
LCMT1-201ENST00000380962 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
LCMT1-201ENST00000380962 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
LCMT1-201ENST00000380962 KDM2BQ8NHM5 1336 aa17.34■□□□□ 0.37
LCMT1-201ENST00000380962 PLEKHG1Q9ULL1 1385 aa17.33■□□□□ 0.37
LCMT1-201ENST00000380962 MYH16Q9H6N6 1097 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms