RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 WAPLQ7Z5K2 1190 aa33.71■■■□□ 2.99
ECHDC3-201ENST00000379215 ROBO2Q9HCK4 1378 aa33.71■■■□□ 2.99
ECHDC3-201ENST00000379215 PLEKHH1Q9ULM0 1364 aa33.71■■■□□ 2.99
ECHDC3-201ENST00000379215 MYOM1P52179 1685 aa33.71■■■□□ 2.99
ECHDC3-201ENST00000379215 ATAD2Q6PL18 1390 aa33.71■■■□□ 2.99
ECHDC3-201ENST00000379215 NINLQ9Y2I6 1382 aa33.71■■■□□ 2.99
ECHDC3-201ENST00000379215 LMTK3Q96Q04 1460 aa33.69■■■□□ 2.98
ECHDC3-201ENST00000379215 NCKAP5LQ9HCH0 1330 aa33.68■■■□□ 2.98
ECHDC3-201ENST00000379215 PANK3Q9H999 370 aa33.68■■■□□ 2.98
ECHDC3-201ENST00000379215 SRPK2P78362 688 aaKnown RBP33.66■■■□□ 2.98
ECHDC3-201ENST00000379215 ADGRB2O60241 1585 aa33.65■■■□□ 2.98
ECHDC3-201ENST00000379215 KTN1Q86UP2 1357 aaKnown RBP33.64■■■□□ 2.98
ECHDC3-201ENST00000379215 CCER2I3L3R5 266 aa33.64■■■□□ 2.98
ECHDC3-201ENST00000379215 CHD2O14647 1828 aaKnown RBP33.61■■■□□ 2.97
ECHDC3-201ENST00000379215 PER1O15534 1290 aaPredicted RBP33.61■■■□□ 2.97
ECHDC3-201ENST00000379215 CDK19Q9BWU1 502 aa33.61■■■□□ 2.97
ECHDC3-201ENST00000379215 PRKRIP1Q9H875 184 aaPredicted RBP33.61■■■□□ 2.97
ECHDC3-201ENST00000379215 CABP2Q9NPB3 220 aa33.61■■■□□ 2.97
ECHDC3-201ENST00000379215 WASLO00401 505 aaPredicted RBP33.6■■■□□ 2.97
ECHDC3-201ENST00000379215 KCNA6P17658 529 aa33.57■■■□□ 2.97
ECHDC3-201ENST00000379215 TMC1Q8TDI8 760 aa33.57■■■□□ 2.97
ECHDC3-201ENST00000379215 KNSTRNQ9Y448 316 aa33.57■■■□□ 2.97
ECHDC3-201ENST00000379215 NWD1Q149M9 1564 aa33.56■■■□□ 2.96
ECHDC3-201ENST00000379215 HSPA2P54652 639 aa33.54■■■□□ 2.96
ECHDC3-201ENST00000379215 RALBP1Q15311 655 aa33.53■■■□□ 2.96
ECHDC3-201ENST00000379215 ANKRD36BQ8N2N9 1353 aa33.53■■■□□ 2.96
ECHDC3-201ENST00000379215 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.53■■■□□ 2.96
ECHDC3-201ENST00000379215 NPC1L1Q9UHC9 1359 aa33.52■■■□□ 2.96
ECHDC3-201ENST00000379215 SLC12A5Q9H2X9 1139 aa33.51■■■□□ 2.96
ECHDC3-201ENST00000379215 NKTRP30414 1462 aaKnown RBP33.48■■■□□ 2.95
ECHDC3-201ENST00000379215 TERF2IPQ9NYB0 399 aa33.48■■■□□ 2.95
ECHDC3-201ENST00000379215 ATP7BP35670 1465 aa33.45■■■□□ 2.95
ECHDC3-201ENST00000379215 PARD3Q8TEW0 1356 aa33.45■■■□□ 2.94
ECHDC3-201ENST00000379215 AMER1Q5JTC6 1135 aaPredicted RBP33.42■■■□□ 2.94
ECHDC3-201ENST00000379215 CCDC61Q9Y6R9 512 aa33.42■■■□□ 2.94
ECHDC3-201ENST00000379215 USP32Q8NFA0 1604 aa33.42■■■□□ 2.94
ECHDC3-201ENST00000379215 HDGFL2Q7Z4V5 671 aaPredicted RBP33.42■■■□□ 2.94
ECHDC3-201ENST00000379215 NUDT16Q96DE0 195 aaKnown RBP33.42■■■□□ 2.94
ECHDC3-201ENST00000379215 NSD3Q9BZ95 1437 aa33.42■■■□□ 2.94
ECHDC3-201ENST00000379215 CARD14Q9BXL6 1004 aa33.4■■■□□ 2.94
ECHDC3-201ENST00000379215 STRCQ7RTU9 1775 aa33.4■■■□□ 2.94
ECHDC3-201ENST00000379215 PPIP5K1Q6PFW1 1433 aa33.4■■■□□ 2.94
ECHDC3-201ENST00000379215 CDC42BPGQ6DT37 1551 aa33.39■■■□□ 2.94
ECHDC3-201ENST00000379215 A0A1W2PP64 1363 aa33.39■■■□□ 2.94
ECHDC3-201ENST00000379215 MYBBP1AQ9BQG0 1328 aaKnown RBP33.39■■■□□ 2.94
ECHDC3-201ENST00000379215 CABP1Q9NZU7 370 aa33.39■■■□□ 2.93
ECHDC3-201ENST00000379215 ADGRL3Q9HAR2 1447 aa33.38■■■□□ 2.93
ECHDC3-201ENST00000379215 ANKARQ7Z5J8 1434 aa33.37■■■□□ 2.93
ECHDC3-201ENST00000379215 CC2D1BQ5T0F9 858 aaKnown RBP33.37■■■□□ 2.93
ECHDC3-201ENST00000379215 CGNL1Q0VF96 1302 aa33.36■■■□□ 2.93
ECHDC3-201ENST00000379215 CD163L1Q9NR16 1453 aa33.36■■■□□ 2.93
ECHDC3-201ENST00000379215 NSD2O96028 1365 aa33.36■■■□□ 2.93
ECHDC3-201ENST00000379215 TOPAZ1Q8N9V7 1692 aa33.33■■■□□ 2.93
ECHDC3-201ENST00000379215 NCOA3Q9Y6Q9 1424 aa33.33■■■□□ 2.93
ECHDC3-201ENST00000379215 CNGB1Q14028 1251 aaPredicted RBP33.33■■■□□ 2.93
ECHDC3-201ENST00000379215 NALCNQ8IZF0 1738 aa33.33■■■□□ 2.93
ECHDC3-201ENST00000379215 DMRT2Q9Y5R5 561 aa33.32■■■□□ 2.92
ECHDC3-201ENST00000379215 PRR36Q9H6K5 1346 aa33.32■■■□□ 2.92
ECHDC3-201ENST00000379215 ITSN1Q15811 1721 aa33.31■■■□□ 2.92
ECHDC3-201ENST00000379215 PROSER2Q86WR7 435 aaPredicted RBP33.31■■■□□ 2.92
ECHDC3-201ENST00000379215 FMN2Q9NZ56 1722 aa33.3■■■□□ 2.92
ECHDC3-201ENST00000379215 CPSF1Q10570 1443 aaKnown RBP33.3■■■□□ 2.92
ECHDC3-201ENST00000379215 NLRP13Q86W25 1043 aa33.29■■■□□ 2.92
ECHDC3-201ENST00000379215 BRD4O60885 1362 aaPredicted RBP33.29■■■□□ 2.92
ECHDC3-201ENST00000379215 PLEKHG3A1L390 1219 aa33.28■■■□□ 2.92
ECHDC3-201ENST00000379215 ZNF692Q9BU19 519 aaPredicted RBP33.28■■■□□ 2.92
ECHDC3-201ENST00000379215 MRS2Q9HD23 443 aa33.28■■■□□ 2.92
ECHDC3-201ENST00000379215 C14orf37Q86TY3 774 aa33.27■■■□□ 2.92
ECHDC3-201ENST00000379215 EDC4Q6P2E9 1401 aaKnown RBP33.25■■■□□ 2.91
ECHDC3-201ENST00000379215 AKAP12Q02952 1782 aa33.2■■■□□ 2.91
ECHDC3-201ENST00000379215 MON2Q7Z3U7 1717 aa33.2■■■□□ 2.9
ECHDC3-201ENST00000379215 DCCP43146 1447 aa33.19■■■□□ 2.9
ECHDC3-201ENST00000379215 STRCP1A6NGW2 1772 aa33.19■■■□□ 2.9
ECHDC3-201ENST00000379215 C19orf44Q9H6X5 657 aa33.19■■■□□ 2.9
ECHDC3-201ENST00000379215 TMEM94Q12767 1356 aa33.18■■■□□ 2.9
ECHDC3-201ENST00000379215 NUTM2FA1L443 756 aa33.18■■■□□ 2.9
ECHDC3-201ENST00000379215 MORC1Q86VD1 984 aa33.17■■■□□ 2.9
ECHDC3-201ENST00000379215 POLR3AO14802 1390 aaPredicted RBP33.16■■■□□ 2.9
ECHDC3-201ENST00000379215 ACEP12821 1306 aa33.15■■■□□ 2.9
ECHDC3-201ENST00000379215 PPP2R1AP30153 589 aa33.15■■■□□ 2.9
ECHDC3-201ENST00000379215 RBM33Q96EV2 1170 aaKnown RBP33.15■■■□□ 2.9
ECHDC3-201ENST00000379215 CCDC184Q52MB2 194 aa33.13■■■□□ 2.89
ECHDC3-201ENST00000379215 YTHDC1Q96MU7 727 aaKnown RBP33.13■■■□□ 2.89
ECHDC3-201ENST00000379215 ANKRD26Q9UPS8 1709 aa33.12■■■□□ 2.89
ECHDC3-201ENST00000379215 KIF20BQ96Q89 1820 aa33.12■■■□□ 2.89
ECHDC3-201ENST00000379215 USP6P35125 1406 aa33.11■■■□□ 2.89
ECHDC3-201ENST00000379215 FYB1O15117 783 aa33.1■■■□□ 2.89
ECHDC3-201ENST00000379215 NGDNQ8NEJ9 315 aaKnown RBP33.1■■■□□ 2.89
ECHDC3-201ENST00000379215 MSH6P52701 1360 aa33.08■■■□□ 2.89
ECHDC3-201ENST00000379215 NRKQ7Z2Y5 1582 aa33.08■■■□□ 2.89
ECHDC3-201ENST00000379215 RGPD8O14715 1765 aaPredicted RBP33.07■■■□□ 2.88
ECHDC3-201ENST00000379215 ATF3P18847 181 aa33.07■■■□□ 2.88
ECHDC3-201ENST00000379215 LRRC7Q96NW7 1537 aa33.06■■■□□ 2.88
ECHDC3-201ENST00000379215 ZNF335Q9H4Z2 1342 aaPredicted RBP33.06■■■□□ 2.88
ECHDC3-201ENST00000379215 CADPS2Q86UW7 1296 aa33.06■■■□□ 2.88
ECHDC3-201ENST00000379215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.06■■■□□ 2.88
ECHDC3-201ENST00000379215 PMFBP1Q8TBY8 1022 aa33.06■■■□□ 2.88
ECHDC3-201ENST00000379215 PHF8Q9UPP1 1060 aa33.06■■■□□ 2.88
ECHDC3-201ENST00000379215 GGNBP2Q9H3C7 697 aa33.05■■■□□ 2.88
ECHDC3-201ENST00000379215 TTC21AQ8NDW8 1320 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms