RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 TECPR2O15040 1411 aa23.92■■□□□ 1.42
LYSMD4-203ENST00000378904 MRS2Q9HD23 443 aa23.92■■□□□ 1.42
LYSMD4-203ENST00000378904 CPS1P31327 1500 aa23.91■■□□□ 1.42
LYSMD4-203ENST00000378904 PARD3Q8TEW0 1356 aa23.91■■□□□ 1.42
LYSMD4-203ENST00000378904 WAPLQ7Z5K2 1190 aa23.91■■□□□ 1.42
LYSMD4-203ENST00000378904 KNSTRNQ9Y448 316 aa23.91■■□□□ 1.42
LYSMD4-203ENST00000378904 PLEKHH1Q9ULM0 1364 aa23.91■■□□□ 1.42
LYSMD4-203ENST00000378904 CC2D1BQ5T0F9 858 aaKnown RBP23.89■■□□□ 1.42
LYSMD4-203ENST00000378904 SLC26A8Q96RN1 970 aa23.89■■□□□ 1.42
LYSMD4-203ENST00000378904 DIP2AQ14689 1571 aa23.89■■□□□ 1.41
LYSMD4-203ENST00000378904 CABP2Q9NPB3 220 aa23.89■■□□□ 1.41
LYSMD4-203ENST00000378904 TMC1Q8TDI8 760 aa23.88■■□□□ 1.41
LYSMD4-203ENST00000378904 MYBBP1AQ9BQG0 1328 aaKnown RBP23.88■■□□□ 1.41
LYSMD4-203ENST00000378904 FAM135BQ49AJ0 1406 aa23.88■■□□□ 1.41
LYSMD4-203ENST00000378904 SIRT1Q96EB6 747 aa23.87■■□□□ 1.41
LYSMD4-203ENST00000378904 SRPK2P78362 688 aaKnown RBP23.86■■□□□ 1.41
LYSMD4-203ENST00000378904 SLC12A5Q9H2X9 1139 aa23.86■■□□□ 1.41
LYSMD4-203ENST00000378904 TBX22Q9Y458 520 aa23.86■■□□□ 1.41
LYSMD4-203ENST00000378904 AMER1Q5JTC6 1135 aaPredicted RBP23.86■■□□□ 1.41
LYSMD4-203ENST00000378904 CARD14Q9BXL6 1004 aa23.84■■□□□ 1.41
LYSMD4-203ENST00000378904 PTPRUQ92729 1446 aa23.84■■□□□ 1.41
LYSMD4-203ENST00000378904 ANKLE2Q86XL3 938 aa23.83■■□□□ 1.4
LYSMD4-203ENST00000378904 CDK19Q9BWU1 502 aa23.83■■□□□ 1.4
LYSMD4-203ENST00000378904 ATAD2Q6PL18 1390 aa23.82■■□□□ 1.4
LYSMD4-203ENST00000378904 ROBO2Q9HCK4 1378 aa23.82■■□□□ 1.4
LYSMD4-203ENST00000378904 NPC1L1Q9UHC9 1359 aa23.82■■□□□ 1.4
LYSMD4-203ENST00000378904 BRD4O60885 1362 aaPredicted RBP23.81■■□□□ 1.4
LYSMD4-203ENST00000378904 NINLQ9Y2I6 1382 aa23.81■■□□□ 1.4
LYSMD4-203ENST00000378904 FAM9BQ8IZU0 186 aa23.79■■□□□ 1.4
LYSMD4-203ENST00000378904 ANKRD36BQ8N2N9 1353 aa23.78■■□□□ 1.4
LYSMD4-203ENST00000378904 NLRP13Q86W25 1043 aa23.78■■□□□ 1.4
LYSMD4-203ENST00000378904 NSD3Q9BZ95 1437 aa23.78■■□□□ 1.4
LYSMD4-203ENST00000378904 AMOTL2Q9Y2J4 779 aa23.78■■□□□ 1.4
LYSMD4-203ENST00000378904 USP32Q8NFA0 1604 aa23.76■■□□□ 1.39
LYSMD4-203ENST00000378904 XRN1Q8IZH2 1706 aaKnown RBP23.76■■□□□ 1.39
LYSMD4-203ENST00000378904 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.76■■□□□ 1.39
LYSMD4-203ENST00000378904 WASLO00401 505 aaPredicted RBP23.75■■□□□ 1.39
LYSMD4-203ENST00000378904 PTCH1Q13635 1447 aa23.74■■□□□ 1.39
LYSMD4-203ENST00000378904 PIK3R4Q99570 1358 aa23.74■■□□□ 1.39
LYSMD4-203ENST00000378904 ADGRB2O60241 1585 aa23.74■■□□□ 1.39
LYSMD4-203ENST00000378904 A0A1W2PP64 1363 aa23.72■■□□□ 1.39
LYSMD4-203ENST00000378904 CD163L1Q9NR16 1453 aa23.71■■□□□ 1.39
LYSMD4-203ENST00000378904 PNISRQ8TF01 805 aaKnown RBP23.71■■□□□ 1.39
LYSMD4-203ENST00000378904 CHD2O14647 1828 aaKnown RBP23.71■■□□□ 1.39
LYSMD4-203ENST00000378904 HNRNPUQ00839 825 aaKnown RBP eCLIP23.7■■□□□ 1.38
LYSMD4-203ENST00000378904 NPHP4O75161 1426 aaPredicted RBP23.7■■□□□ 1.38
LYSMD4-203ENST00000378904 PPP2R1AP30153 589 aa23.69■■□□□ 1.38
LYSMD4-203ENST00000378904 TERF2IPQ9NYB0 399 aa23.69■■□□□ 1.38
LYSMD4-203ENST00000378904 CABP1Q9NZU7 370 aa23.69■■□□□ 1.38
LYSMD4-203ENST00000378904 CGNL1Q0VF96 1302 aa23.68■■□□□ 1.38
LYSMD4-203ENST00000378904 ATP7BP35670 1465 aa23.66■■□□□ 1.38
LYSMD4-203ENST00000378904 KCNA6P17658 529 aa23.66■■□□□ 1.38
LYSMD4-203ENST00000378904 KDM4FA0A1W2PPD8 638 aa23.65■■□□□ 1.38
LYSMD4-203ENST00000378904 HDGFL2Q7Z4V5 671 aaPredicted RBP23.65■■□□□ 1.38
LYSMD4-203ENST00000378904 NUDT16Q96DE0 195 aaKnown RBP23.65■■□□□ 1.38
LYSMD4-203ENST00000378904 PPIP5K1Q6PFW1 1433 aa23.65■■□□□ 1.38
LYSMD4-203ENST00000378904 NCKAP5LQ9HCH0 1330 aa23.64■■□□□ 1.38
LYSMD4-203ENST00000378904 NSD2O96028 1365 aa23.63■■□□□ 1.37
LYSMD4-203ENST00000378904 MORC1Q86VD1 984 aa23.62■■□□□ 1.37
LYSMD4-203ENST00000378904 CCDC61Q9Y6R9 512 aa23.62■■□□□ 1.37
LYSMD4-203ENST00000378904 PRR36Q9H6K5 1346 aa23.61■■□□□ 1.37
LYSMD4-203ENST00000378904 TOPAZ1Q8N9V7 1692 aa23.61■■□□□ 1.37
LYSMD4-203ENST00000378904 ANKRD26Q9UPS8 1709 aa23.6■■□□□ 1.37
LYSMD4-203ENST00000378904 CDC42BPGQ6DT37 1551 aa23.6■■□□□ 1.37
LYSMD4-203ENST00000378904 ITSN1Q15811 1721 aa23.6■■□□□ 1.37
LYSMD4-203ENST00000378904 KIF20BQ96Q89 1820 aa23.6■■□□□ 1.37
LYSMD4-203ENST00000378904 AKAP12Q02952 1782 aa23.59■■□□□ 1.37
LYSMD4-203ENST00000378904 CPSF1Q10570 1443 aaKnown RBP23.58■■□□□ 1.37
LYSMD4-203ENST00000378904 MON2Q7Z3U7 1717 aa23.57■■□□□ 1.36
LYSMD4-203ENST00000378904 NALCNQ8IZF0 1738 aa23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 NUTM2FA1L443 756 aa23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 FYB1O15117 783 aa23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 RGPD8O14715 1765 aaPredicted RBP23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 TNNT2P45379 298 aaPredicted RBP23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 GGNBP2Q9H3C7 697 aa23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 ZBED9Q6R2W3 1325 aa23.53■■□□□ 1.36
LYSMD4-203ENST00000378904 NWD1Q149M9 1564 aa23.53■■□□□ 1.36
LYSMD4-203ENST00000378904 EDC4Q6P2E9 1401 aaKnown RBP23.52■■□□□ 1.36
LYSMD4-203ENST00000378904 FMN2Q9NZ56 1722 aa23.52■■□□□ 1.36
LYSMD4-203ENST00000378904 HSPA2P54652 639 aa23.5■■□□□ 1.35
LYSMD4-203ENST00000378904 NKTRP30414 1462 aaKnown RBP23.5■■□□□ 1.35
LYSMD4-203ENST00000378904 PLEKHG3A1L390 1219 aa23.5■■□□□ 1.35
LYSMD4-203ENST00000378904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.5■■□□□ 1.35
LYSMD4-203ENST00000378904 INSRP06213 1382 aa23.5■■□□□ 1.35
LYSMD4-203ENST00000378904 ZNF692Q9BU19 519 aaPredicted RBP23.49■■□□□ 1.35
LYSMD4-203ENST00000378904 POLR3AO14802 1390 aaPredicted RBP23.49■■□□□ 1.35
LYSMD4-203ENST00000378904 LMTK3Q96Q04 1460 aa23.49■■□□□ 1.35
LYSMD4-203ENST00000378904 WDR43Q15061 677 aaKnown RBP eCLIP23.47■■□□□ 1.35
LYSMD4-203ENST00000378904 BLMP54132 1417 aaPredicted RBP23.47■■□□□ 1.35
LYSMD4-203ENST00000378904 ANKARQ7Z5J8 1434 aa23.47■■□□□ 1.35
LYSMD4-203ENST00000378904 ACEP12821 1306 aa23.47■■□□□ 1.35
LYSMD4-203ENST00000378904 RBM33Q96EV2 1170 aaKnown RBP23.47■■□□□ 1.35
LYSMD4-203ENST00000378904 NRKQ7Z2Y5 1582 aa23.46■■□□□ 1.35
LYSMD4-203ENST00000378904 ADAMTS8Q9UP79 889 aa23.46■■□□□ 1.35
LYSMD4-203ENST00000378904 ADGRL3Q9HAR2 1447 aa23.45■■□□□ 1.35
LYSMD4-203ENST00000378904 MTHFSP49914 203 aa23.45■■□□□ 1.34
LYSMD4-203ENST00000378904 SHPRHQ149N8 1683 aa23.43■■□□□ 1.34
LYSMD4-203ENST00000378904 SENP3-EIF4A1A0A087X0R7 540 aa23.43■■□□□ 1.34
LYSMD4-203ENST00000378904 NME9Q86XW9 330 aa23.42■■□□□ 1.34
LYSMD4-203ENST00000378904 USP6P35125 1406 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms