RNA–Protein interactions for RNA: ENST00000378850.4

C4orf47-201, Transcript of chromosome 4 open reading frame 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4orf47, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47-201ENST00000378850 SMPD1P17405 629 aa11.6□□□□□ -0.55
C4orf47-201ENST00000378850 GCGRP47871 477 aa11.6□□□□□ -0.55
C4orf47-201ENST00000378850 ATP13A2Q9NQ11 1180 aa11.6□□□□□ -0.55
C4orf47-201ENST00000378850 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
C4orf47-201ENST00000378850 SNRPBP14678 240 aaKnown RBP11.59□□□□□ -0.55
C4orf47-201ENST00000378850 SNIP1Q8TAD8 396 aaKnown RBP11.59□□□□□ -0.55
C4orf47-201ENST00000378850 WNT7AO00755 349 aa11.58□□□□□ -0.56
C4orf47-201ENST00000378850 RBM26Q5T8P6 1007 aaKnown RBP11.58□□□□□ -0.56
C4orf47-201ENST00000378850 RNF19BQ6ZMZ0 732 aa11.57□□□□□ -0.56
C4orf47-201ENST00000378850 J3QL48 77 aa11.56□□□□□ -0.56
C4orf47-201ENST00000378850 TERTO14746 1132 aaKnown RBP11.56□□□□□ -0.56
C4orf47-201ENST00000378850 GNPATO15228 680 aa11.56□□□□□ -0.56
C4orf47-201ENST00000378850 MSS51Q4VC12 460 aa11.55□□□□□ -0.56
C4orf47-201ENST00000378850 LCE2CQ5TA81 110 aa11.55□□□□□ -0.56
C4orf47-201ENST00000378850 MRGPRX2Q96LB1 330 aa11.55□□□□□ -0.56
C4orf47-201ENST00000378850 TRIM32Q13049 653 aa11.53□□□□□ -0.56
C4orf47-201ENST00000378850 P3H3Q8IVL6 736 aa11.53□□□□□ -0.56
C4orf47-201ENST00000378850 SULF1Q8IWU6 871 aa11.53□□□□□ -0.56
C4orf47-201ENST00000378850 TRIM47Q96LD4 638 aa11.53□□□□□ -0.56
C4orf47-201ENST00000378850 SENP2Q9HC62 589 aa11.53□□□□□ -0.56
C4orf47-201ENST00000378850 GRIPAP1Q4V328 841 aa11.51□□□□□ -0.57
C4orf47-201ENST00000378850 HPS1Q92902 700 aa11.51□□□□□ -0.57
C4orf47-201ENST00000378850 PHOX2BQ99453 314 aa11.51□□□□□ -0.57
C4orf47-201ENST00000378850 MMP16P51512 607 aa11.48□□□□□ -0.57
C4orf47-201ENST00000378850 SMYD5Q6GMV2 418 aa11.47□□□□□ -0.57
C4orf47-201ENST00000378850 TESPA1A2RU30 521 aaPredicted RBP11.46□□□□□ -0.57
C4orf47-201ENST00000378850 GPR37O15354 613 aa11.46□□□□□ -0.57
C4orf47-201ENST00000378850 Q3C1V9 767 aa11.46□□□□□ -0.57
C4orf47-201ENST00000378850 PRKCSHP14314 528 aaPredicted RBP11.45□□□□□ -0.58
C4orf47-201ENST00000378850 CCDC24Q8N4L8 307 aa11.45□□□□□ -0.58
C4orf47-201ENST00000378850 KIFC2Q96AC6 838 aa11.45□□□□□ -0.58
C4orf47-201ENST00000378850 RC3H1Q5TC82 1133 aaKnown RBP11.44□□□□□ -0.58
C4orf47-201ENST00000378850 REPIN1Q9BWE0 567 aaKnown RBP11.44□□□□□ -0.58
C4orf47-201ENST00000378850 USB1Q9BQ65 265 aaKnown RBP11.43□□□□□ -0.58
C4orf47-201ENST00000378850 DXOO77932 396 aaKnown RBP11.41□□□□□ -0.58
C4orf47-201ENST00000378850 SKOR1P84550 965 aa11.41□□□□□ -0.58
C4orf47-201ENST00000378850 TPRNQ4KMQ1 711 aa11.41□□□□□ -0.58
C4orf47-201ENST00000378850 SLC16A10Q8TF71 515 aa11.41□□□□□ -0.58
C4orf47-201ENST00000378850 ALDH1A1P00352 501 aa11.38□□□□□ -0.59
C4orf47-201ENST00000378850 NXF1Q9UBU9 619 aaKnown RBP11.38□□□□□ -0.59
C4orf47-201ENST00000378850 CD46P15529 392 aa11.37□□□□□ -0.59
C4orf47-201ENST00000378850 FAM181BA6NEQ2 426 aa11.36□□□□□ -0.59
C4orf47-201ENST00000378850 KDM4AO75164 1064 aa11.36□□□□□ -0.59
C4orf47-201ENST00000378850 WNT7BP56706 349 aa11.36□□□□□ -0.59
C4orf47-201ENST00000378850 GMPRP36959 345 aa11.35□□□□□ -0.59
C4orf47-201ENST00000378850 HLA-CQ95604 372 aa11.35□□□□□ -0.59
C4orf47-201ENST00000378850 ZSCAN1Q8NBB4 408 aa11.32□□□□□ -0.6
C4orf47-201ENST00000378850 BMP1P13497 986 aa11.31□□□□□ -0.6
C4orf47-201ENST00000378850 LORP23490 312 aaPredicted RBP11.31□□□□□ -0.6
C4orf47-201ENST00000378850 VEGFBP49765 207 aa11.31□□□□□ -0.6
C4orf47-201ENST00000378850 SIAH2O43255 324 aa11.3□□□□□ -0.6
C4orf47-201ENST00000378850 TRIM46Q7Z4K8 759 aa11.3□□□□□ -0.6
C4orf47-201ENST00000378850 IRF7Q92985 503 aa11.3□□□□□ -0.6
C4orf47-201ENST00000378850 CAPN5O15484 640 aaPredicted RBP11.29□□□□□ -0.6
C4orf47-201ENST00000378850 GPIHBP1Q8IV16 184 aa11.29□□□□□ -0.6
C4orf47-201ENST00000378850 USP46P62068 366 aa11.28□□□□□ -0.6
C4orf47-201ENST00000378850 PTCRAQ6ISU1 281 aaPredicted RBP11.28□□□□□ -0.6
C4orf47-201ENST00000378850 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
C4orf47-201ENST00000378850 SYMPKQ92797 1274 aaKnown RBP11.28□□□□□ -0.6
C4orf47-201ENST00000378850 WASF2Q9Y6W5 498 aa11.28□□□□□ -0.6
C4orf47-201ENST00000378850 GUCA2AQ02747 115 aa11.27□□□□□ -0.61
C4orf47-201ENST00000378850 NPAS3Q8IXF0 933 aa11.27□□□□□ -0.61
C4orf47-201ENST00000378850 JUNDP17535 347 aa11.26□□□□□ -0.61
C4orf47-201ENST00000378850 HOXA2O43364 376 aa11.25□□□□□ -0.61
C4orf47-201ENST00000378850 MDM2Q00987 491 aaPredicted RBP11.24□□□□□ -0.61
C4orf47-201ENST00000378850 H3BM21 787 aa11.23□□□□□ -0.61
C4orf47-201ENST00000378850 NUDT12Q9BQG2 462 aa11.23□□□□□ -0.61
C4orf47-201ENST00000378850 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
C4orf47-201ENST00000378850 ZFP42Q96MM3 310 aa11.21□□□□□ -0.61
C4orf47-201ENST00000378850 SH3BP2P78314 561 aa11.2□□□□□ -0.62
C4orf47-201ENST00000378850 IRF6O14896 467 aa11.19□□□□□ -0.62
C4orf47-201ENST00000378850 MAP2K5Q13163 448 aa11.19□□□□□ -0.62
C4orf47-201ENST00000378850 LOC100996750A0A140TA64 210 aa11.18□□□□□ -0.62
C4orf47-201ENST00000378850 KRTAP4-6Q9BYQ5 205 aa11.18□□□□□ -0.62
C4orf47-201ENST00000378850 RETREG3Q86VR2 466 aa11.17□□□□□ -0.62
C4orf47-201ENST00000378850 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.15□□□□□ -0.62
C4orf47-201ENST00000378850 NUTM1Q86Y26 1132 aa11.15□□□□□ -0.62
C4orf47-201ENST00000378850 TULP1O00294 542 aaPredicted RBP11.13□□□□□ -0.63
C4orf47-201ENST00000378850 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
C4orf47-201ENST00000378850 CCNYL3P0C7X3 344 aa11.12□□□□□ -0.63
C4orf47-201ENST00000378850 MS4A1P11836 297 aa11.12□□□□□ -0.63
C4orf47-201ENST00000378850 LINC01559Q495D7 138 aa11.12□□□□□ -0.63
C4orf47-201ENST00000378850 BAP1Q92560 729 aa11.12□□□□□ -0.63
C4orf47-201ENST00000378850 TLL2Q9Y6L7 1015 aa11.12□□□□□ -0.63
C4orf47-201ENST00000378850 MINK1Q8N4C8 1332 aaPredicted RBP11.11□□□□□ -0.63
C4orf47-201ENST00000378850 FDX1P10109 184 aa11.11□□□□□ -0.63
C4orf47-201ENST00000378850 PCDHGC3Q9UN70 934 aa11.11□□□□□ -0.63
C4orf47-201ENST00000378850 SOBPA7XYQ1 873 aa11.1□□□□□ -0.63
C4orf47-201ENST00000378850 SCARF1Q14162 830 aa11.1□□□□□ -0.63
C4orf47-201ENST00000378850 MRPL14Q6P1L8 145 aaKnown RBP11.1□□□□□ -0.63
C4orf47-201ENST00000378850 PURBQ96QR8 312 aaKnown RBP11.1□□□□□ -0.63
C4orf47-201ENST00000378850 UNC93B1Q9H1C4 597 aa11.1□□□□□ -0.63
C4orf47-201ENST00000378850 GPCPD1Q9NPB8 672 aa11.1□□□□□ -0.63
C4orf47-201ENST00000378850 FAM217BQ9NTX9 383 aaPredicted RBP11.1□□□□□ -0.63
C4orf47-201ENST00000378850 EVA1BQ9NVM1 165 aa11.1□□□□□ -0.63
C4orf47-201ENST00000378850 PLEKHG3A1L390 1219 aa11.09□□□□□ -0.63
C4orf47-201ENST00000378850 NNTQ13423 1086 aa11.09□□□□□ -0.63
C4orf47-201ENST00000378850 VARSP26640 1264 aaKnown RBP11.07□□□□□ -0.64
C4orf47-201ENST00000378850 CLCN1P35523 988 aa11.07□□□□□ -0.64
C4orf47-201ENST00000378850 WDR4P57081 412 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms